RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 BEGAINQ9BUH8 593 aa8.57□□□□□ -1.04
SPG11-224ENST00000561268 TTF2Q9UNY4 1162 aaKnown RBP8.57□□□□□ -1.04
SPG11-224ENST00000561268 TNNQ9UQP3 1299 aa8.57□□□□□ -1.04
SPG11-224ENST00000561268 ATRNL1Q5VV63 1379 aa8.57□□□□□ -1.04
SPG11-224ENST00000561268 PDE4DIPQ5VU43 2346 aa8.57□□□□□ -1.04
SPG11-224ENST00000561268 CLRN2A0PK11 232 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 SEMA3EO15041 775 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 MYO1BO43795 1136 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 ZBTB48P10074 688 aaPredicted RBP8.56□□□□□ -1.04
SPG11-224ENST00000561268 SLC5A1P13866 664 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 CRKP46108 304 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 TM4SF4P48230 202 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 BCAMP50895 628 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 GRM1Q13255 1194 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 ATP2B3Q16720 1220 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 CAVIN4Q5BKX8 364 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 PRAMEF18Q5VWM3 479 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 HHIPL2Q6UWX4 724 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 DZIP1LQ8IYY4 767 aaKnown RBP8.56□□□□□ -1.04
SPG11-224ENST00000561268 ZNF70Q9UC06 446 aaPredicted RBP8.56□□□□□ -1.04
SPG11-224ENST00000561268 TSKSQ9UJT2 592 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 JAG2Q9Y219 1238 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 PARP14Q460N5 1801 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 DOCK3Q8IZD9 2030 aa8.56□□□□□ -1.04
SPG11-224ENST00000561268 GAKO14976 1311 aa8.55□□□□□ -1.04
SPG11-224ENST00000561268 F8W031 263 aaPredicted RBP8.55□□□□□ -1.04
SPG11-224ENST00000561268 UBE2Q2LH0YL09 131 aa8.55□□□□□ -1.04
SPG11-224ENST00000561268 BCAR3O75815 825 aa8.55□□□□□ -1.04
SPG11-224ENST00000561268 RASA3Q14644 834 aa8.55□□□□□ -1.04
SPG11-224ENST00000561268 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
SPG11-224ENST00000561268 APOBEC3HQ6NTF7 200 aaKnown RBP8.55□□□□□ -1.04
SPG11-224ENST00000561268 ARMC9Q7Z3E5 817 aa8.55□□□□□ -1.04
SPG11-224ENST00000561268 FAM83AQ86UY5 434 aa8.55□□□□□ -1.04
SPG11-224ENST00000561268 SLAIN1Q8ND83 568 aa8.55□□□□□ -1.04
SPG11-224ENST00000561268 WDR66Q8TBY9 1149 aa8.55□□□□□ -1.04
SPG11-224ENST00000561268 ABHD8Q96I13 439 aa8.55□□□□□ -1.04
SPG11-224ENST00000561268 RNF186Q9NXI6 227 aa8.55□□□□□ -1.04
SPG11-224ENST00000561268 PA2G4Q9UQ80 394 aaKnown RBP8.55□□□□□ -1.04
SPG11-224ENST00000561268 IPO8O15397 1037 aaKnown RBP8.54□□□□□ -1.04
SPG11-224ENST00000561268 PRDX5P30044 214 aa8.54□□□□□ -1.04
SPG11-224ENST00000561268 GJA5P36382 358 aa8.54□□□□□ -1.04
SPG11-224ENST00000561268 PHKA1P46020 1223 aa8.54□□□□□ -1.04
SPG11-224ENST00000561268 NBPF12Q5TAG4 269 aaPredicted RBP8.54□□□□□ -1.04
SPG11-224ENST00000561268 ERICH6Q7L0X2 663 aa8.54□□□□□ -1.04
SPG11-224ENST00000561268 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.54□□□□□ -1.04
SPG11-224ENST00000561268 TEKT1Q969V4 418 aa8.54□□□□□ -1.04
SPG11-224ENST00000561268 WNK4Q96J92 1243 aa8.54□□□□□ -1.04
SPG11-224ENST00000561268 TDRD3Q9H7E2 651 aaKnown RBP8.54□□□□□ -1.04
SPG11-224ENST00000561268 ANGEL1Q9UNK9 670 aaKnown RBP8.54□□□□□ -1.04
SPG11-224ENST00000561268 IQSEC3Q9UPP2 1182 aaPredicted RBP8.54□□□□□ -1.04
SPG11-224ENST00000561268 DAGLAQ9Y4D2 1042 aa8.54□□□□□ -1.04
SPG11-224ENST00000561268 PCDHB13Q9Y5F0 798 aa8.54□□□□□ -1.04
SPG11-224ENST00000561268 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.54□□□□□ -1.04
SPG11-224ENST00000561268 KIAA0100Q14667 2235 aaKnown RBP8.53□□□□□ -1.04
SPG11-224ENST00000561268 BAZ2AQ9UIF9 1905 aaKnown RBP8.53□□□□□ -1.04
SPG11-224ENST00000561268 PNMA6EA0A0J9YXQ4 647 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 TESPA1A2RU30 521 aaPredicted RBP8.53□□□□□ -1.04
SPG11-224ENST00000561268 SRGAP3O43295 1099 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 PPP1R12BO60237 982 aaPredicted RBP8.53□□□□□ -1.04
SPG11-224ENST00000561268 USP2O75604 605 aaPredicted RBP8.53□□□□□ -1.04
SPG11-224ENST00000561268 ARID4AP29374 1257 aaPredicted RBP8.53□□□□□ -1.04
SPG11-224ENST00000561268 SREBF2Q12772 1141 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 CHAF1AQ13111 956 aaPredicted RBP8.53□□□□□ -1.04
SPG11-224ENST00000561268 RASGRF1Q13972 1273 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 SUPT20HL1Q3ZLR7 823 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 IER5LQ5T953 404 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 ZKSCAN2Q63HK3 967 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 CCDC102BQ68D86 513 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 VPS37DQ86XT2 251 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 TMEM57Q8N5G2 664 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 SSH3Q8TE77 659 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 CLMNQ96JQ2 1002 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 MCOLN1Q9GZU1 580 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 SIL1Q9H173 461 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 VEZTQ9HBM0 779 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 CEP126Q9P2H0 1117 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 FZD1Q9UP38 647 aa8.53□□□□□ -1.04
SPG11-224ENST00000561268 GREB1LQ9C091 1923 aaPredicted RBP8.52□□□□□ -1.04
SPG11-224ENST00000561268 PLXNB2O15031 1838 aa8.52□□□□□ -1.04
SPG11-224ENST00000561268 FRMPD3Q5JV73 1810 aa8.52□□□□□ -1.04
SPG11-224ENST00000561268 A0A1B0GUL7 405 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 MANSC4A6NHS7 340 aaPredicted RBP8.52□□□□□ -1.05
SPG11-224ENST00000561268 ST18O60284 1047 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 TRPA1O75762 1119 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 GNAI2P04899 355 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 RLBP1P12271 317 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 ADORA1P30542 326 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 RGS19P49795 217 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.52□□□□□ -1.05
SPG11-224ENST00000561268 ANKRD13AQ8IZ07 590 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 ZNF384Q8TF68 577 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 TMEM39BQ9GZU3 492 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 GPR108Q9NPR9 543 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 DENND2AQ9ULE3 1009 aa8.52□□□□□ -1.05
SPG11-224ENST00000561268 A0A0G2JMZ2 1700 aa8.51□□□□□ -1.05
SPG11-224ENST00000561268 SPDYE5A6NIY4 337 aa8.51□□□□□ -1.05
SPG11-224ENST00000561268 IGF2BP3O00425 579 aaKnown RBP eCLIP8.51□□□□□ -1.05
SPG11-224ENST00000561268 IREB2P48200 963 aaKnown RBP8.51□□□□□ -1.05
SPG11-224ENST00000561268 TNNI2P48788 182 aa8.51□□□□□ -1.05
SPG11-224ENST00000561268 RBM5P52756 815 aaKnown RBP eCLIP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms