RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 MCOLN1Q9GZU1 580 aa17.32■□□□□ 0.36
TNFAIP2-207ENST00000560562 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
TNFAIP2-207ENST00000560562 RPAP1Q9BWH6 1393 aaPredicted RBP17.32■□□□□ 0.36
TNFAIP2-207ENST00000560562 TNNI2P48788 182 aa17.31■□□□□ 0.36
TNFAIP2-207ENST00000560562 G3BP1Q13283 466 aaKnown RBP eCLIP17.31■□□□□ 0.36
TNFAIP2-207ENST00000560562 MVPQ14764 893 aaKnown RBP17.31■□□□□ 0.36
TNFAIP2-207ENST00000560562 FAM83AQ86UY5 434 aa17.31■□□□□ 0.36
TNFAIP2-207ENST00000560562 ANKRD13AQ8IZ07 590 aa17.31■□□□□ 0.36
TNFAIP2-207ENST00000560562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.31■□□□□ 0.36
TNFAIP2-207ENST00000560562 ELP3Q9H9T3 547 aa17.31■□□□□ 0.36
TNFAIP2-207ENST00000560562 HMG20BQ9P0W2 317 aa17.31■□□□□ 0.36
TNFAIP2-207ENST00000560562 GAKO14976 1311 aa17.31■□□□□ 0.36
TNFAIP2-207ENST00000560562 IGF2BP3O00425 579 aaKnown RBP eCLIP17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 ZBTB48P10074 688 aaPredicted RBP17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 VGLL4Q14135 290 aa17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 FAM198AQ9UFP1 575 aa17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 UNCXA6NJT0 531 aa17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 ARID4AP29374 1257 aaPredicted RBP17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 MCAMP43121 646 aa17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 SREBF2Q12772 1141 aa17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 DGKZQ13574 1117 aa17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 ZFPM1Q8IX07 1006 aa17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 TMOD2Q9NZR1 351 aa17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 ABCF2Q9UG63 623 aa17.3■□□□□ 0.36
TNFAIP2-207ENST00000560562 FOCADQ5VW36 1801 aa17.29■□□□□ 0.36
TNFAIP2-207ENST00000560562 SURF6O75683 361 aaKnown RBP17.29■□□□□ 0.36
TNFAIP2-207ENST00000560562 TCP10Q12799 353 aa17.29■□□□□ 0.36
TNFAIP2-207ENST00000560562 TNNI3KQ59H18 835 aa17.29■□□□□ 0.36
TNFAIP2-207ENST00000560562 TBC1D9Q6ZT07 1266 aa17.29■□□□□ 0.36
TNFAIP2-207ENST00000560562 OPTNQ96CV9 577 aa17.29■□□□□ 0.36
TNFAIP2-207ENST00000560562 DBNDD2Q9BQY9 259 aa17.29■□□□□ 0.36
TNFAIP2-207ENST00000560562 NOP58Q9Y2X3 529 aaKnown RBP17.29■□□□□ 0.36
TNFAIP2-207ENST00000560562 FPGT-TNNI3KV9GXZ4 949 aa17.29■□□□□ 0.36
TNFAIP2-207ENST00000560562 MANSC4A6NHS7 340 aaPredicted RBP17.28■□□□□ 0.36
TNFAIP2-207ENST00000560562 MAP3K9P80192 1104 aa17.28■□□□□ 0.36
TNFAIP2-207ENST00000560562 IFNL1Q8IU54 200 aa17.28■□□□□ 0.36
TNFAIP2-207ENST00000560562 SPATA5Q8NB90 893 aa17.28■□□□□ 0.36
TNFAIP2-207ENST00000560562 ZNF296Q8WUU4 475 aaPredicted RBP17.28■□□□□ 0.36
TNFAIP2-207ENST00000560562 FAM151AQ8WW52 585 aa17.28■□□□□ 0.36
TNFAIP2-207ENST00000560562 PTPN18Q99952 460 aa17.28■□□□□ 0.36
TNFAIP2-207ENST00000560562 USP40Q9NVE5 1235 aa17.28■□□□□ 0.36
TNFAIP2-207ENST00000560562 TLR7Q9NYK1 1049 aaKnown RBP17.28■□□□□ 0.36
TNFAIP2-207ENST00000560562 SNCAIPQ9Y6H5 919 aa17.28■□□□□ 0.36
TNFAIP2-207ENST00000560562 PTPRFP10586 1907 aa17.27■□□□□ 0.36
TNFAIP2-207ENST00000560562 ATRNL1Q5VV63 1379 aa17.27■□□□□ 0.36
TNFAIP2-207ENST00000560562 SIPA1L1O43166 1804 aa17.27■□□□□ 0.36
TNFAIP2-207ENST00000560562 PHIPQ8WWQ0 1821 aa17.27■□□□□ 0.36
TNFAIP2-207ENST00000560562 MECOMQ03112 1051 aa17.27■□□□□ 0.35
TNFAIP2-207ENST00000560562 MIGA2Q7L4E1 593 aa17.27■□□□□ 0.35
TNFAIP2-207ENST00000560562 DZIP1Q86YF9 867 aaKnown RBP17.27■□□□□ 0.35
TNFAIP2-207ENST00000560562 ZGPATQ8N5A5 531 aaKnown RBP17.27■□□□□ 0.35
TNFAIP2-207ENST00000560562 ZKSCAN4Q969J2 545 aaPredicted RBP17.27■□□□□ 0.35
TNFAIP2-207ENST00000560562 MS4A4AQ96JQ5 239 aa17.27■□□□□ 0.35
TNFAIP2-207ENST00000560562 CFHR5Q9BXR6 569 aa17.27■□□□□ 0.35
TNFAIP2-207ENST00000560562 GPR108Q9NPR9 543 aa17.27■□□□□ 0.35
TNFAIP2-207ENST00000560562 BRCA2P51587 3418 aa17.26■□□□□ 0.35
TNFAIP2-207ENST00000560562 MROH7-TTC4A0A0A0MT08 1334 aa17.26■□□□□ 0.35
TNFAIP2-207ENST00000560562 TNRC18O15417 2968 aaPredicted RBP17.26■□□□□ 0.35
TNFAIP2-207ENST00000560562 SLURP2P0DP57 97 aa17.26■□□□□ 0.35
TNFAIP2-207ENST00000560562 OS9Q13438 667 aaPredicted RBP17.26■□□□□ 0.35
TNFAIP2-207ENST00000560562 WRNIP1Q96S55 665 aa17.26■□□□□ 0.35
TNFAIP2-207ENST00000560562 DDX4Q9NQI0 724 aaKnown RBP17.26■□□□□ 0.35
TNFAIP2-207ENST00000560562 DBNLQ9UJU6 430 aaKnown RBP17.26■□□□□ 0.35
TNFAIP2-207ENST00000560562 COG6Q9Y2V7 657 aa17.26■□□□□ 0.35
TNFAIP2-207ENST00000560562 ZSWIM8A7E2V4 1837 aa17.26■□□□□ 0.35
TNFAIP2-207ENST00000560562 DOCK1Q14185 1865 aa17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 ATAD5Q96QE3 1844 aa17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 GPR25O00155 361 aa17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 WDHD1O75717 1129 aaPredicted RBP17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 INPP5BP32019 993 aa17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 RGS3P49796 1198 aa17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 SH3BP5LQ7L8J4 393 aa17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 NSUN4Q96CB9 384 aaKnown RBP17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 FAM163AQ96GL9 167 aaPredicted RBP17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 SNRKQ9NRH2 765 aa17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 RCAN3Q9UKA8 241 aa17.25■□□□□ 0.35
TNFAIP2-207ENST00000560562 TESPA1A2RU30 521 aaPredicted RBP17.24■□□□□ 0.35
TNFAIP2-207ENST00000560562 BTDP43251 543 aa17.24■□□□□ 0.35
TNFAIP2-207ENST00000560562 RHBDL3P58872 404 aa17.24■□□□□ 0.35
TNFAIP2-207ENST00000560562 C20orf194Q5TEA3 1177 aa17.24■□□□□ 0.35
TNFAIP2-207ENST00000560562 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
TNFAIP2-207ENST00000560562 BRI3BPQ8WY22 251 aa17.24■□□□□ 0.35
TNFAIP2-207ENST00000560562 EAF2Q96CJ1 260 aaPredicted RBP17.24■□□□□ 0.35
TNFAIP2-207ENST00000560562 OTUD5Q96G74 571 aa17.24■□□□□ 0.35
TNFAIP2-207ENST00000560562 IDI2Q9BXS1 227 aa17.24■□□□□ 0.35
TNFAIP2-207ENST00000560562 EXOC6BQ9Y2D4 811 aa17.24■□□□□ 0.35
TNFAIP2-207ENST00000560562 SPDYE5A6NIY4 337 aa17.23■□□□□ 0.35
TNFAIP2-207ENST00000560562 INHBEP58166 350 aa17.23■□□□□ 0.35
TNFAIP2-207ENST00000560562 NOM1Q5C9Z4 860 aaKnown RBP17.23■□□□□ 0.35
TNFAIP2-207ENST00000560562 SPTY2D1Q68D10 685 aaPredicted RBP17.23■□□□□ 0.35
TNFAIP2-207ENST00000560562 SIRT2Q8IXJ6 389 aa17.23■□□□□ 0.35
TNFAIP2-207ENST00000560562 CSADQ9Y600 493 aa17.23■□□□□ 0.35
TNFAIP2-207ENST00000560562 GPR75-ASB3A0A0A6YYF3 556 aa17.22■□□□□ 0.35
TNFAIP2-207ENST00000560562 CCDC85CA6NKD9 419 aa17.22■□□□□ 0.35
TNFAIP2-207ENST00000560562 UQCRFS1P1P0C7P4 283 aa17.22■□□□□ 0.35
TNFAIP2-207ENST00000560562 CTU1Q7Z7A3 348 aaKnown RBP17.22■□□□□ 0.35
TNFAIP2-207ENST00000560562 ZNF341Q9BYN7 854 aa17.22■□□□□ 0.35
TNFAIP2-207ENST00000560562 CCDC8Q9H0W5 538 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms