RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CCDC8Q9H0W5 538 aaPredicted RBP15.44■□□□□ 0.06
SMAD3-208ENST00000558827 R3HDMLQ9H3Y0 253 aa15.44■□□□□ 0.06
SMAD3-208ENST00000558827 SEMA3EO15041 775 aa15.43■□□□□ 0.06
SMAD3-208ENST00000558827 TNNI3KQ59H18 835 aa15.43■□□□□ 0.06
SMAD3-208ENST00000558827 CEP85Q6P2H3 762 aa15.43■□□□□ 0.06
SMAD3-208ENST00000558827 ABHD8Q96I13 439 aa15.43■□□□□ 0.06
SMAD3-208ENST00000558827 MCOLN1Q9GZU1 580 aa15.43■□□□□ 0.06
SMAD3-208ENST00000558827 EXOC6BQ9Y2D4 811 aa15.43■□□□□ 0.06
SMAD3-208ENST00000558827 FPGT-TNNI3KV9GXZ4 949 aa15.43■□□□□ 0.06
SMAD3-208ENST00000558827 MYH2Q9UKX2 1941 aa15.43■□□□□ 0.06
SMAD3-208ENST00000558827 SLURP2P0DP57 97 aa15.42■□□□□ 0.06
SMAD3-208ENST00000558827 TM4SF4P48230 202 aa15.42■□□□□ 0.06
SMAD3-208ENST00000558827 MAP3K9P80192 1104 aa15.42■□□□□ 0.06
SMAD3-208ENST00000558827 C20orf194Q5TEA3 1177 aa15.42■□□□□ 0.06
SMAD3-208ENST00000558827 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.42■□□□□ 0.06
SMAD3-208ENST00000558827 ERICH6Q7L0X2 663 aa15.42■□□□□ 0.06
SMAD3-208ENST00000558827 ANKRD13AQ8IZ07 590 aa15.42■□□□□ 0.06
SMAD3-208ENST00000558827 SPATA5Q8NB90 893 aa15.42■□□□□ 0.06
SMAD3-208ENST00000558827 ZKSCAN4Q969J2 545 aaPredicted RBP15.42■□□□□ 0.06
SMAD3-208ENST00000558827 SAGE1Q9NXZ1 904 aa15.42■□□□□ 0.06
SMAD3-208ENST00000558827 RAI14Q9P0K7 980 aa15.42■□□□□ 0.06
SMAD3-208ENST00000558827 SALL1Q9NSC2 1324 aa15.42■□□□□ 0.06
SMAD3-208ENST00000558827 CCDC85CA6NKD9 419 aa15.41■□□□□ 0.06
SMAD3-208ENST00000558827 MCAMP43121 646 aa15.41■□□□□ 0.06
SMAD3-208ENST00000558827 MECOMQ03112 1051 aa15.41■□□□□ 0.06
SMAD3-208ENST00000558827 VGLL4Q14135 290 aa15.41■□□□□ 0.06
SMAD3-208ENST00000558827 TTC39AQ5SRH9 613 aa15.41■□□□□ 0.06
SMAD3-208ENST00000558827 OPTNQ96CV9 577 aa15.41■□□□□ 0.06
SMAD3-208ENST00000558827 TLR7Q9NYK1 1049 aaKnown RBP15.41■□□□□ 0.06
SMAD3-208ENST00000558827 FAM198AQ9UFP1 575 aa15.41■□□□□ 0.06
SMAD3-208ENST00000558827 IGF2BP3O00425 579 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMAD3-208ENST00000558827 BTDP43251 543 aa15.4■□□□□ 0.06
SMAD3-208ENST00000558827 RGS3P49796 1198 aa15.4■□□□□ 0.06
SMAD3-208ENST00000558827 SREBF2Q12772 1141 aa15.4■□□□□ 0.06
SMAD3-208ENST00000558827 PICALMQ13492 652 aa15.4■□□□□ 0.06
SMAD3-208ENST00000558827 SPTY2D1Q68D10 685 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-208ENST00000558827 FAM83AQ86UY5 434 aa15.4■□□□□ 0.06
SMAD3-208ENST00000558827 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-208ENST00000558827 ZGPATQ8N5A5 531 aaKnown RBP15.4■□□□□ 0.06
SMAD3-208ENST00000558827 ZNF384Q8TF68 577 aa15.4■□□□□ 0.06
SMAD3-208ENST00000558827 FAM151AQ8WW52 585 aa15.4■□□□□ 0.06
SMAD3-208ENST00000558827 OTUD5Q96G74 571 aa15.4■□□□□ 0.06
SMAD3-208ENST00000558827 YTHDC1Q96MU7 727 aaKnown RBP15.4■□□□□ 0.06
SMAD3-208ENST00000558827 WRNIP1Q96S55 665 aa15.4■□□□□ 0.06
SMAD3-208ENST00000558827 OTOFQ9HC10 1997 aa15.39■□□□□ 0.05
SMAD3-208ENST00000558827 MANSC4A6NHS7 340 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-208ENST00000558827 ARID4AP29374 1257 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-208ENST00000558827 INPP5BP32019 993 aa15.39■□□□□ 0.05
SMAD3-208ENST00000558827 ZSCAN29Q8IWY8 852 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-208ENST00000558827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.39■□□□□ 0.056e-6■□□□□ 9
SMAD3-208ENST00000558827 ZNF296Q8WUU4 475 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-208ENST00000558827 EAF2Q96CJ1 260 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-208ENST00000558827 IL1RAPL2Q9NP60 686 aa15.39■□□□□ 0.05
SMAD3-208ENST00000558827 LRP2BPQ9P2M1 347 aa15.39■□□□□ 0.05
SMAD3-208ENST00000558827 NOP58Q9Y2X3 529 aaKnown RBP15.39■□□□□ 0.05
SMAD3-208ENST00000558827 CSADQ9Y600 493 aa15.39■□□□□ 0.05
SMAD3-208ENST00000558827 NDUFB9Q9Y6M9 179 aa15.39■□□□□ 0.05
SMAD3-208ENST00000558827 UQCRFS1P1P0C7P4 283 aa15.38■□□□□ 0.05
SMAD3-208ENST00000558827 MS4A1P11836 297 aa15.38■□□□□ 0.05
SMAD3-208ENST00000558827 CCDC158Q5M9N0 1113 aa15.38■□□□□ 0.05
SMAD3-208ENST00000558827 FKBP1CQ5VVH2 108 aa15.38■□□□□ 0.05
SMAD3-208ENST00000558827 IFNL1Q8IU54 200 aa15.38■□□□□ 0.05
SMAD3-208ENST00000558827 DDX4Q9NQI0 724 aaKnown RBP15.38■□□□□ 0.05
SMAD3-208ENST00000558827 DBNLQ9UJU6 430 aaKnown RBP15.38■□□□□ 0.05
SMAD3-208ENST00000558827 GPR25O00155 361 aa15.37■□□□□ 0.05
SMAD3-208ENST00000558827 ZBTB48P10074 688 aaPredicted RBP15.37■□□□□ 0.05
SMAD3-208ENST00000558827 ZAP70P43403 619 aa15.37■□□□□ 0.05
SMAD3-208ENST00000558827 SH3BP5LQ7L8J4 393 aa15.37■□□□□ 0.05
SMAD3-208ENST00000558827 PTPN18Q99952 460 aa15.37■□□□□ 0.05
SMAD3-208ENST00000558827 ZNF341Q9BYN7 854 aa15.37■□□□□ 0.05
SMAD3-208ENST00000558827 GPR108Q9NPR9 543 aa15.37■□□□□ 0.05
SMAD3-208ENST00000558827 SNCAIPQ9Y6H5 919 aa15.37■□□□□ 0.05
SMAD3-208ENST00000558827 MROH7-TTC4A0A0A0MT08 1334 aa15.37■□□□□ 0.05
SMAD3-208ENST00000558827 GAKO14976 1311 aa15.37■□□□□ 0.05
SMAD3-208ENST00000558827 DCAF15Q66K64 600 aa15.36■□□□□ 0.05
SMAD3-208ENST00000558827 AACSQ86V21 672 aa15.36■□□□□ 0.05
SMAD3-208ENST00000558827 SLF2Q8IX21 1173 aa15.36■□□□□ 0.05
SMAD3-208ENST00000558827 SIRT2Q8IXJ6 389 aa15.36■□□□□ 0.05
SMAD3-208ENST00000558827 NSUN4Q96CB9 384 aaKnown RBP15.36■□□□□ 0.05
SMAD3-208ENST00000558827 PIH1D3Q9NQM4 214 aaKnown RBP15.36■□□□□ 0.05
SMAD3-208ENST00000558827 ZBTB40Q9NUA8 1239 aa15.36■□□□□ 0.05
SMAD3-208ENST00000558827 DDX19BQ9UMR2 479 aa15.36■□□□□ 0.05
SMAD3-208ENST00000558827 CCL15-CCL14A0A0B4J2E2 113 aa15.35■□□□□ 0.05
SMAD3-208ENST00000558827 DDTLA6NHG4 134 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-208ENST00000558827 WDHD1O75717 1129 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-208ENST00000558827 ECM2O94769 699 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-208ENST00000558827 CYP2E1P05181 493 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-208ENST00000558827 CCL15Q16663 113 aa15.35■□□□□ 0.05
SMAD3-208ENST00000558827 BRI3BPQ8WY22 251 aa15.35■□□□□ 0.05
SMAD3-208ENST00000558827 PDS5AQ29RF7 1337 aaKnown RBP15.35■□□□□ 0.05
SMAD3-208ENST00000558827 MYO5AQ9Y4I1 1855 aaKnown RBP15.35■□□□□ 0.05
SMAD3-208ENST00000558827 GPR75-ASB3A0A0A6YYF3 556 aa15.34■□□□□ 0.05
SMAD3-208ENST00000558827 UNCXA6NJT0 531 aa15.34■□□□□ 0.05
SMAD3-208ENST00000558827 FAM196BA6NMK8 535 aa15.34■□□□□ 0.05
SMAD3-208ENST00000558827 LDHCP07864 332 aa15.34■□□□□ 0.05
SMAD3-208ENST00000558827 RHBDL3P58872 404 aa15.34■□□□□ 0.05
SMAD3-208ENST00000558827 NAA16Q6N069 864 aaPredicted RBP15.34■□□□□ 0.05
SMAD3-208ENST00000558827 CTU1Q7Z7A3 348 aaKnown RBP15.34■□□□□ 0.05
SMAD3-208ENST00000558827 FAM163AQ96GL9 167 aaPredicted RBP15.34■□□□□ 0.05
SMAD3-208ENST00000558827 MS4A4AQ96JQ5 239 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms