RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SLC27A3Q5K4L6 730 aa8.93□□□□□ -0.98
SPG11-204ENST00000557866 SLC10A5Q5PT55 438 aa8.93□□□□□ -0.98
SPG11-204ENST00000557866 TRAPPC3LQ5T215 181 aa8.93□□□□□ -0.98
SPG11-204ENST00000557866 PTCRAQ6ISU1 281 aaPredicted RBP8.93□□□□□ -0.98
SPG11-204ENST00000557866 CWC27Q6UX04 472 aaKnown RBP8.93□□□□□ -0.98
SPG11-204ENST00000557866 XAGE2Q96GT9 111 aa8.93□□□□□ -0.98
SPG11-204ENST00000557866 ANO2Q9NQ90 1003 aa8.93□□□□□ -0.98
SPG11-204ENST00000557866 AAASQ9NRG9 546 aa8.93□□□□□ -0.98
SPG11-204ENST00000557866 EVA1BQ9NVM1 165 aa8.93□□□□□ -0.98
SPG11-204ENST00000557866 PALD1Q9ULE6 856 aa8.93□□□□□ -0.98
SPG11-204ENST00000557866 RTL9Q8NET4 1388 aa8.93□□□□□ -0.98
SPG11-204ENST00000557866 ABCC12Q96J65 1359 aa8.93□□□□□ -0.98
SPG11-204ENST00000557866 NUP98P52948 1817 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 CHGBP05060 677 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 RXRBP28702 533 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 SKOR1P84550 965 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 NMIQ13287 307 aaPredicted RBP8.92□□□□□ -0.98
SPG11-204ENST00000557866 SF3B3Q15393 1217 aaKnown RBP8.92□□□□□ -0.98
SPG11-204ENST00000557866 CTC1Q2NKJ3 1217 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 CCDC152Q4G0S7 254 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 CRIPAKQ8N1N5 446 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.92□□□□□ -0.98
SPG11-204ENST00000557866 IL17RAQ96F46 866 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 FAM227BQ96M60 508 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 SETDB2Q96T68 719 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 SNRKQ9NRH2 765 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 CNNM1Q9NRU3 951 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 AKAP2Q9Y2D5 859 aa8.92□□□□□ -0.98
SPG11-204ENST00000557866 ANKRD36CQ5JPF3 1778 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 LRP5O75197 1615 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 RAD50Q92878 1312 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 A0A0D9SFI3 127 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 SNAP23O00161 211 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 EPB41L2O43491 1005 aaKnown RBP8.91□□□□□ -0.98
SPG11-204ENST00000557866 FGFR2P21802 821 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 RFC4P35249 363 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 PTH1RQ03431 593 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 SCARF1Q14162 830 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 NFIXQ14938 502 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 RABEP1Q15276 862 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 ATP2B3Q16720 1220 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 TXNRD1Q16881 649 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 PRPF38BQ5VTL8 546 aaKnown RBP8.91□□□□□ -0.98
SPG11-204ENST00000557866 POTEAQ6S8J7 498 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 ERICH6Q7L0X2 663 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 DNAJC2Q99543 621 aaKnown RBP8.91□□□□□ -0.98
SPG11-204ENST00000557866 FSD1Q9BTV5 496 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 DIAPH3Q9NSV4 1193 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 SBF2Q86WG5 1849 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 LY75O60449 1722 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 C4BP0C0L5 1744 aa8.91□□□□□ -0.98
SPG11-204ENST00000557866 MROH5Q6ZUA9 1318 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 HIP1O00291 1037 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 GOLIM4O00461 696 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 AXIN1O15169 862 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 PDE8BO95263 885 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 IFIT1P09914 478 aaKnown RBP8.9□□□□□ -0.98
SPG11-204ENST00000557866 HSP90B1P14625 803 aaKnown RBP8.9□□□□□ -0.98
SPG11-204ENST00000557866 HSPA4P34932 840 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 KCNH2Q12809 1159 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 SLFNL1Q499Z3 407 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 DDX46Q7L014 1031 aaKnown RBP8.9□□□□□ -0.98
SPG11-204ENST00000557866 ZNF589Q86UQ0 364 aaPredicted RBP8.9□□□□□ -0.98
SPG11-204ENST00000557866 NBPF5PQ86XG9 351 aaPredicted RBP8.9□□□□□ -0.98
SPG11-204ENST00000557866 HSCBQ8IWL3 235 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 KBTBD3Q8NAB2 608 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 HELBQ8NG08 1087 aaPredicted RBP8.9□□□□□ -0.98
SPG11-204ENST00000557866 NYXQ9GZU5 481 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 ANTXR1Q9H6X2 564 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 BCORQ6W2J9 1755 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 COL4A1P02462 1669 aa8.9□□□□□ -0.98
SPG11-204ENST00000557866 EP400Q96L91 3159 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 MED23Q9ULK4 1368 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 SCN7AQ01118 1682 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 PLSCR1O15162 318 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 ST8SIA5O15466 376 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 GYS1P13807 737 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 SMPD1P17405 629 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 SSFA2P28290 1259 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 TM4SF1P30408 202 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 IGHMBP2P38935 993 aaKnown RBP8.89□□□□□ -0.99
SPG11-204ENST00000557866 SMCPP49901 116 aaPredicted RBP8.89□□□□□ -0.99
SPG11-204ENST00000557866 ANAPC15P60006 121 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 ZNF827Q17R98 1081 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 TTC39AQ5SRH9 613 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 RUFY2Q8WXA3 655 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 KCNB2Q92953 911 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 SEC62Q99442 399 aaKnown RBP8.89□□□□□ -0.99
SPG11-204ENST00000557866 MPHOSPH8Q99549 860 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 PAG1Q9NWQ8 432 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 BRWD3Q6RI45 1802 aa8.89□□□□□ -0.99
SPG11-204ENST00000557866 RFX7Q2KHR2 1363 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 TAF5LO75529 589 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 APBA3O96018 575 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 MCAMP43121 646 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 ZAP70P43403 619 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 PHKA1P46020 1223 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 CHRNDQ07001 517 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 PUM3Q15397 648 aaKnown RBP8.88□□□□□ -0.99
SPG11-204ENST00000557866 TUSC1Q2TAM9 212 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms