RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	DUSP27	Q5VZP5	1158 aa		12.11	□□□□□ -0.47
PABPN1-208	ENST00000557702	MYLIP	Q8WY64	445 aa		12.11	□□□□□ -0.47
PABPN1-208	ENST00000557702	COA7	Q96BR5	231 aa		12.11	□□□□□ -0.47
PABPN1-208	ENST00000557702	HMX1	Q9NP08	348 aa	Predicted RBP	12.11	□□□□□ -0.47
PABPN1-208	ENST00000557702	COL2A1	P02458	1487 aa	Predicted RBP	12.1	□□□□□ -0.47
PABPN1-208	ENST00000557702	SPEF2	Q9C093	1822 aa		12.1	□□□□□ -0.47
PABPN1-208	ENST00000557702	TAF5L	O75529	589 aa		12.1	□□□□□ -0.47
PABPN1-208	ENST00000557702	DDX58	O95786	925 aa	Known RBP	12.1	□□□□□ -0.47
PABPN1-208	ENST00000557702	FOSL2	P15408	326 aa		12.1	□□□□□ -0.47
PABPN1-208	ENST00000557702	TMPO	P42166	694 aa	Known RBP	12.1	□□□□□ -0.47
PABPN1-208	ENST00000557702	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.1	□□□□□ -0.47
PABPN1-208	ENST00000557702	ZNF341	Q9BYN7	854 aa		12.1	□□□□□ -0.47
PABPN1-208	ENST00000557702	MGAM	O43451	1857 aa		12.1	□□□□□ -0.47
PABPN1-208	ENST00000557702	HMGCR	P04035	888 aa		12.09	□□□□□ -0.47
PABPN1-208	ENST00000557702	INPP5B	P32019	993 aa		12.09	□□□□□ -0.47
PABPN1-208	ENST00000557702	CACNB3	P54284	484 aa		12.09	□□□□□ -0.47
PABPN1-208	ENST00000557702	GPAT2	Q6NUI2	795 aa		12.09	□□□□□ -0.47
PABPN1-208	ENST00000557702	MIGA2	Q7L4E1	593 aa		12.09	□□□□□ -0.47
PABPN1-208	ENST00000557702	FAM83A	Q86UY5	434 aa		12.09	□□□□□ -0.47
PABPN1-208	ENST00000557702	TMOD2	Q9NZR1	351 aa		12.09	□□□□□ -0.47
PABPN1-208	ENST00000557702	OGDHL	Q9ULD0	1010 aa		12.09	□□□□□ -0.47
PABPN1-208	ENST00000557702	CXCL11	O14625	94 aa		12.08	□□□□□ -0.48
PABPN1-208	ENST00000557702	FASTKD5	Q7L8L6	764 aa	Known RBP	12.08	□□□□□ -0.48
PABPN1-208	ENST00000557702	PFAS	O15067	1338 aa		12.08	□□□□□ -0.48
PABPN1-208	ENST00000557702	DOCK3	Q8IZD9	2030 aa		12.07	□□□□□ -0.48
PABPN1-208	ENST00000557702	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.07	□□□□□ -0.48
PABPN1-208	ENST00000557702	ARAP2	Q8WZ64	1704 aa		12.07	□□□□□ -0.48
PABPN1-208	ENST00000557702	MAP3K2	Q9Y2U5	619 aa		12.07	□□□□□ -0.48
PABPN1-208	ENST00000557702	NCOR1	O75376	2440 aa		12.07	□□□□□ -0.48
PABPN1-208	ENST00000557702	MYH3	P11055	1940 aa		12.06	□□□□□ -0.48
PABPN1-208	ENST00000557702	IGKV5-2	P06315	115 aa		12.06	□□□□□ -0.48
PABPN1-208	ENST00000557702	NEXN	Q0ZGT2	675 aa		12.06	□□□□□ -0.48
PABPN1-208	ENST00000557702	NEUROD2	Q15784	382 aa		12.06	□□□□□ -0.48
PABPN1-208	ENST00000557702	LRRC26	Q2I0M4	334 aa		12.06	□□□□□ -0.48
PABPN1-208	ENST00000557702	FKBP1C	Q5VVH2	108 aa		12.06	□□□□□ -0.48
PABPN1-208	ENST00000557702	UBE3B	Q7Z3V4	1068 aa		12.06	□□□□□ -0.48
PABPN1-208	ENST00000557702	PLA2G12B	Q9BX93	195 aa		12.06	□□□□□ -0.48
PABPN1-208	ENST00000557702	SLC45A1	Q9Y2W3	748 aa		12.06	□□□□□ -0.48
PABPN1-208	ENST00000557702	CDH23	Q9H251	3354 aa		12.06	□□□□□ -0.48
PABPN1-208	ENST00000557702	ANKRD18B	A2A2Z9	1011 aa		12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702		H7C1W4	665 aa		12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702	CSF1R	P07333	972 aa		12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702	COL6A1	P12109	1028 aa		12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702	HDLBP	Q00341	1268 aa	Known RBP	12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702	TRIM32	Q13049	653 aa		12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702	NOL9	Q5SY16	702 aa	Known RBP	12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702	TDRD7	Q8NHU6	1098 aa	Known RBP	12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702	TEKT1	Q969V4	418 aa		12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702	TTYH1	Q9H313	450 aa	Predicted RBP	12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702	ZNF112	Q9UJU3	913 aa		12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702	DDX60L	Q5H9U9	1706 aa	Known RBP	12.05	□□□□□ -0.48
PABPN1-208	ENST00000557702		A0A0G2JLL6	359 aa	Predicted RBP	12.04	□□□□□ -0.48
PABPN1-208	ENST00000557702	SMAD3	P84022	425 aa	Known RBP	12.04	□□□□□ -0.48
PABPN1-208	ENST00000557702	KSR2	Q6VAB6	950 aa		12.04	□□□□□ -0.48
PABPN1-208	ENST00000557702	GADL1	Q6ZQY3	521 aa		12.04	□□□□□ -0.48
PABPN1-208	ENST00000557702	PRRT2	Q7Z6L0	340 aa	Predicted RBP	12.04	□□□□□ -0.48
PABPN1-208	ENST00000557702	ANKRD13C	Q8N6S4	541 aa		12.04	□□□□□ -0.48
PABPN1-208	ENST00000557702	PRKAG2	Q9UGJ0	569 aa		12.04	□□□□□ -0.48
PABPN1-208	ENST00000557702	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.04	□□□□□ -0.48
PABPN1-208	ENST00000557702	SYNGAP1	Q96PV0	1343 aa		12.04	□□□□□ -0.48
PABPN1-208	ENST00000557702	PI4KAP2	A4QPH2	592 aa		12.03	□□□□□ -0.48
PABPN1-208	ENST00000557702	NEURL1B	A8MQ27	555 aa		12.03	□□□□□ -0.48
PABPN1-208	ENST00000557702	PLIN1	O60240	522 aa		12.03	□□□□□ -0.48
PABPN1-208	ENST00000557702	HIBADH	P31937	336 aa	Known RBP	12.03	□□□□□ -0.48
PABPN1-208	ENST00000557702	SHH	Q15465	462 aa		12.03	□□□□□ -0.48
PABPN1-208	ENST00000557702	CWF19L2	Q2TBE0	894 aa	Known RBP	12.03	□□□□□ -0.48
PABPN1-208	ENST00000557702	PI4KAP1	Q8N8J0	262 aa		12.03	□□□□□ -0.48
PABPN1-208	ENST00000557702	ATXN2L	Q8WWM7	1075 aa	Known RBP	12.03	□□□□□ -0.48
PABPN1-208	ENST00000557702	ZDHHC15	Q96MV8	337 aa		12.03	□□□□□ -0.48
PABPN1-208	ENST00000557702	ZHX2	Q9Y6X8	837 aa		12.03	□□□□□ -0.48
PABPN1-208	ENST00000557702	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.03	□□□□□ -0.48
PABPN1-208	ENST00000557702	IFIT5	Q13325	482 aa	Known RBP	12.02	□□□□□ -0.49
PABPN1-208	ENST00000557702	FAM110C	Q1W6H9	321 aa		12.02	□□□□□ -0.49
PABPN1-208	ENST00000557702	USP38	Q8NB14	1042 aa		12.02	□□□□□ -0.49
PABPN1-208	ENST00000557702	MRI	Q9BWK5	157 aa		12.02	□□□□□ -0.49
PABPN1-208	ENST00000557702	C1QTNF1	Q9BXJ1	281 aa		12.02	□□□□□ -0.49
PABPN1-208	ENST00000557702	CHMP4A	Q9BY43	222 aa		12.02	□□□□□ -0.49
PABPN1-208	ENST00000557702	GJD2	Q9UKL4	321 aa		12.02	□□□□□ -0.49
PABPN1-208	ENST00000557702	ELL2	O00472	640 aa	Predicted RBP	12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	GYG1	P46976	350 aa		12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	GRIK5	Q16478	980 aa		12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	MAP3K21	Q5TCX8	1036 aa		12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	ADAMTS19	Q8TE59	1207 aa		12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	TBC1D22A	Q8WUA7	517 aa		12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	FAM151A	Q8WW52	585 aa		12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	PCGF6	Q9BYE7	350 aa		12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	PICK1	Q9NRD5	415 aa		12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	MBIP	Q9NS73	344 aa		12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	TRIM35	Q9UPQ4	493 aa		12.01	□□□□□ -0.49
PABPN1-208	ENST00000557702	PIEZO1	Q92508	2521 aa		12	□□□□□ -0.49
PABPN1-208	ENST00000557702	PRKAR2A	P13861	404 aa	Known RBP	12	□□□□□ -0.49
PABPN1-208	ENST00000557702	CCDC30	Q5VVM6	783 aa		12	□□□□□ -0.49
PABPN1-208	ENST00000557702	TRIB2	Q92519	343 aa		12	□□□□□ -0.49
PABPN1-208	ENST00000557702	FAM84B	Q96KN1	310 aa	Predicted RBP	12	□□□□□ -0.49
PABPN1-208	ENST00000557702	ASB2	Q96Q27	587 aa		12	□□□□□ -0.49
PABPN1-208	ENST00000557702	UHRF1	Q96T88	793 aa	Predicted RBP	12	□□□□□ -0.49
PABPN1-208	ENST00000557702	SENP6	Q9GZR1	1112 aa	Predicted RBP	12	□□□□□ -0.49
PABPN1-208	ENST00000557702	PNMA3	Q9UL41	463 aa		12	□□□□□ -0.49
PABPN1-208	ENST00000557702	HCN4	Q9Y3Q4	1203 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms