RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TMEM67Q5HYA8 995 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 EPB41P11171 864 aaKnown RBP9.82□□□□□ -0.84
SYNE3-205ENST00000557275 TUBB6Q9BUF5 446 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 EIF3CLB5ME19 914 aaKnown RBP9.82□□□□□ -0.84
SYNE3-205ENST00000557275 GJB2P29033 226 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 PSMD6Q15008 389 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 ANO6Q4KMQ2 910 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 CCDC92Q53HC0 331 aaPredicted RBP9.82□□□□□ -0.84
SYNE3-205ENST00000557275 PRPF40BQ6NWY9 871 aaKnown RBP9.82□□□□□ -0.84
SYNE3-205ENST00000557275 PNMA8AQ86V59 439 aaPredicted RBP9.82□□□□□ -0.84
SYNE3-205ENST00000557275 FAM186BQ8IYM0 893 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 EIF3CQ99613 913 aaKnown RBP9.82□□□□□ -0.84
SYNE3-205ENST00000557275 SPDYE3A6NKU9 549 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 CCDC122Q5T0U0 273 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 EVCP57679 992 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 RILPQ96NA2 401 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 PSMD7P51665 324 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 GUCA1BQ9UMX6 200 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 TRIM37O94972 964 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 ZSCAN22P10073 491 aaPredicted RBP9.82□□□□□ -0.84
SYNE3-205ENST00000557275 TXLNGQ9NUQ3 528 aa9.82□□□□□ -0.84
SYNE3-205ENST00000557275 ZPR1O75312 459 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 ZNF449Q6P9G9 518 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 CERS3Q8IU89 383 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 HECW1Q76N89 1606 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 AKR1B15C9JRZ8 316 aaPredicted RBP9.81□□□□□ -0.84
SYNE3-205ENST00000557275 ZBTB24O43167 697 aaPredicted RBP9.81□□□□□ -0.84
SYNE3-205ENST00000557275 CTAGE3PQ8IX95 158 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 PRPF38AQ8NAV1 312 aaKnown RBP9.81□□□□□ -0.84
SYNE3-205ENST00000557275 CRNKL1Q9BZJ0 848 aaKnown RBP9.81□□□□□ -0.84
SYNE3-205ENST00000557275 CFAP65Q6ZU64 1925 aaKnown RBP9.81□□□□□ -0.84
SYNE3-205ENST00000557275 MCF2L2Q86YR7 1114 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 MAP7D3Q8IWC1 876 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 LEO1Q8WVC0 666 aaPredicted RBP9.81□□□□□ -0.84
SYNE3-205ENST00000557275 ZKSCAN3Q9BRR0 538 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 TRIM55Q9BYV6 548 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 MAD1L1Q9Y6D9 718 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 CAMSAP2Q08AD1 1489 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 SPOPO43791 374 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 CDC5LQ99459 802 aaKnown RBP9.81□□□□□ -0.84
SYNE3-205ENST00000557275 MX2P20592 715 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 ASIC1P78348 528 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 ADAMTS8Q9UP79 889 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 PTPRGP23470 1445 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 YWHAEP62258 255 aaKnown RBP9.81□□□□□ -0.84
SYNE3-205ENST00000557275 SNCBQ16143 134 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 CNNM4Q6P4Q7 775 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 CCDC84Q86UT8 332 aaPredicted RBP9.81□□□□□ -0.84
SYNE3-205ENST00000557275 BAG1Q99933 345 aaPredicted RBP9.81□□□□□ -0.84
SYNE3-205ENST00000557275 HNRNPCL2B2RXH8 293 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 HNRNPCL1O60812 293 aaKnown RBP9.81□□□□□ -0.84
SYNE3-205ENST00000557275 ASPHQ12797 758 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 ESR2Q92731 530 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 GDAP1L1Q96MZ0 367 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 NEK2P51955 445 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 MAP3K10Q02779 954 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 FAM160A1Q05DH4 1040 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 SCOCQ9UIL1 159 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 GNAT2P19087 354 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 EFCC1Q9HA90 598 aa9.81□□□□□ -0.84
SYNE3-205ENST00000557275 DKC1O60832 514 aaKnown RBP eCLIP9.8□□□□□ -0.841e-9■■■■■ 70.1
SYNE3-205ENST00000557275 RRP36Q96EU6 259 aaKnown RBP9.8□□□□□ -0.84
SYNE3-205ENST00000557275 ARHGAP6O43182 974 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 HCLS1P14317 486 aaPredicted RBP9.8□□□□□ -0.84
SYNE3-205ENST00000557275 EXOSC9Q06265 439 aaKnown RBP9.8□□□□□ -0.84
SYNE3-205ENST00000557275 LRGUKQ96M69 825 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 MAN1A1P33908 653 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 RASA3Q14644 834 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 IQUBQ8NA54 791 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 TLDC2A0PJX2 215 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 BCRP11274 1271 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 PLCG2P16885 1265 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 TMEM57Q8N5G2 664 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 SPDL1Q96EA4 605 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 BRD3Q15059 726 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 ARHGAP5Q13017 1502 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 FAM69CQ0P6D2 419 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 UAP1Q16222 522 aaPredicted RBP9.8□□□□□ -0.84
SYNE3-205ENST00000557275 RBM42Q9BTD8 480 aaKnown RBP9.8□□□□□ -0.84
SYNE3-205ENST00000557275 VEZTQ9HBM0 779 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 SKIP12755 728 aa9.8□□□□□ -0.84
SYNE3-205ENST00000557275 ZNF530Q6P9A1 599 aaPredicted RBP9.8□□□□□ -0.84
SYNE3-205ENST00000557275 SRRM1Q8IYB3 904 aaKnown RBP9.8□□□□□ -0.84
SYNE3-205ENST00000557275 MRPL46Q9H2W6 279 aaKnown RBP9.8□□□□□ -0.84
SYNE3-205ENST00000557275 ZC3H6P61129 1189 aaKnown RBP9.8□□□□□ -0.84
SYNE3-205ENST00000557275 FGD6Q6ZV73 1430 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 GNAT3A8MTJ3 354 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 F8W8V4 182 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 TSC1Q92574 1164 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 POLR3CQ9BUI4 534 aaPredicted RBP9.79□□□□□ -0.84
SYNE3-205ENST00000557275 EXOC7Q9UPT5 735 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 TRIM75PA6NK02 468 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 GOLGA8KD6RF30 607 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 STX2P32856 288 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 BIRC2Q13490 618 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 TSPY2A6NKD2 308 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 BIN1O00499 593 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 SPZ1Q9BXG8 430 aa9.79□□□□□ -0.84
SYNE3-205ENST00000557275 PSDA5PKW4 1024 aaPredicted RBP9.79□□□□□ -0.84
SYNE3-205ENST00000557275 TPX2Q9ULW0 747 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms