RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	NECAB1	Q8N987	351 aa		11.24	□□□□□ -0.61
HNRNPC-223	ENST00000556142	TBC1D16	Q8TBP0	767 aa		11.24	□□□□□ -0.61
HNRNPC-223	ENST00000556142	GPR101	Q96P66	508 aa	Predicted RBP	11.24	□□□□□ -0.61
HNRNPC-223	ENST00000556142	RAI14	Q9P0K7	980 aa		11.24	□□□□□ -0.61
HNRNPC-223	ENST00000556142	ABCF2	Q9UG63	623 aa		11.24	□□□□□ -0.61
HNRNPC-223	ENST00000556142	POLL	Q9UGP5	575 aa		11.24	□□□□□ -0.61
HNRNPC-223	ENST00000556142	ATP6V0A2	Q9Y487	856 aa		11.24	□□□□□ -0.61
HNRNPC-223	ENST00000556142	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.24	□□□□□ -0.61
HNRNPC-223	ENST00000556142	KIAA1551	Q9HCM1	1747 aa		11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	PPEF1	O14829	653 aa	Predicted RBP	11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	BAG4	O95429	457 aa	Known RBP	11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	IL1R1	P14778	569 aa		11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	PDE6B	P35913	854 aa		11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	ANTXR2	P58335	489 aa		11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	C9orf131	Q5VYM1	1079 aa		11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	TMED8	Q6PL24	325 aa	Predicted RBP	11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	TBC1D10C	Q8IV04	446 aa		11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	LRRC2	Q9BYS8	371 aa		11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	GGA1	Q9UJY5	639 aa		11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	LAMA4	Q16363	1823 aa		11.23	□□□□□ -0.61
HNRNPC-223	ENST00000556142	KIF13B	Q9NQT8	1826 aa		11.22	□□□□□ -0.61
HNRNPC-223	ENST00000556142	UFL1	O94874	794 aa		11.22	□□□□□ -0.61
HNRNPC-223	ENST00000556142	MECOM	Q03112	1051 aa		11.22	□□□□□ -0.61
HNRNPC-223	ENST00000556142	NAA16	Q6N069	864 aa	Predicted RBP	11.22	□□□□□ -0.61
HNRNPC-223	ENST00000556142	MIGA1	Q8NAN2	632 aa		11.22	□□□□□ -0.61
HNRNPC-223	ENST00000556142	CD209	Q9NNX6	404 aa		11.22	□□□□□ -0.61
HNRNPC-223	ENST00000556142	SLC4A4	Q9Y6R1	1079 aa		11.22	□□□□□ -0.61
HNRNPC-223	ENST00000556142	C10orf71	Q711Q0	1435 aa		11.22	□□□□□ -0.61
HNRNPC-223	ENST00000556142	WDR19	Q8NEZ3	1342 aa		11.22	□□□□□ -0.61
HNRNPC-223	ENST00000556142	MAGEB6P1	A0A0J9YX57	407 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	PFKFB2	O60825	505 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	DPEP1	P16444	411 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	GJB2	P29033	226 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	PRDX5	P30044	214 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	ALDH1B1	P30837	517 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	DYNLL1	P63167	89 aa	Known RBP	11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	CHAF1A	Q13111	956 aa	Predicted RBP	11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	GRIK5	Q16478	980 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	ZNF804A	Q7Z570	1209 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	NCOA7	Q8NI08	942 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	WDR66	Q8TBY9	1149 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	BRF1	Q92994	677 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	GTF3C6	Q969F1	213 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	MASTL	Q96GX5	879 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	GBP4	Q96PP9	640 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	SMC3	Q9UQE7	1217 aa		11.21	□□□□□ -0.61
HNRNPC-223	ENST00000556142	APP	P05067	770 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	SCRN1	Q12765	414 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	CHST3	Q7LGC8	479 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	ZNF274	Q96GC6	653 aa	Predicted RBP	11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	RRAGC	Q9HB90	399 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	ANAPC4	Q9UJX5	808 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	DDX11L8	A8MPP1	907 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	PRC1	O43663	620 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	HSPA1A	P0DMV8	641 aa	Known RBP	11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	HSPA1B	P0DMV9	641 aa	Known RBP	11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	SYT1	P21579	422 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	MCM5	P33992	734 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	APOBR	Q0VD83	1088 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	STYK1	Q6J9G0	422 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	GIMAP6	Q6P9H5	292 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	CYB5R4	Q7L1T6	521 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	REM2	Q8IYK8	340 aa	Predicted RBP	11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	SMC1B	Q8NDV3	1235 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	SMARCC2	Q8TAQ2	1214 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	STAG1	Q8WVM7	1258 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	NAPB	Q9H115	298 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	INCENP	Q9NQS7	918 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	GPHN	Q9NQX3	736 aa	Predicted RBP	11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	COL11A2	P13942	1736 aa	Predicted RBP	11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	TIAM2	Q8IVF5	1701 aa		11.2	□□□□□ -0.62
HNRNPC-223	ENST00000556142	NEDD4	P46934	1319 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	PCNT	O95613	3336 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	DUOX1	Q9NRD9	1551 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	DTNB	O60941	627 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	CTDNEP1	O95476	244 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	PDIA3	P30101	505 aa	Known RBP	11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	CTDSPL2	Q05D32	466 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	STK3	Q13188	491 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	OLFM4	Q6UX06	510 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	SDR42E1	Q8WUS8	393 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	NACAP1	Q9BZK3	213 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	RNF181	Q9P0P0	153 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	BRPF3	Q9ULD4	1205 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	MTMR6	Q9Y217	621 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	JAG2	Q9Y219	1238 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	FAM205A	Q6ZU69	1335 aa		11.19	□□□□□ -0.62
HNRNPC-223	ENST00000556142	STX6	O43752	255 aa		11.18	□□□□□ -0.62
HNRNPC-223	ENST00000556142	FGR	P09769	529 aa		11.18	□□□□□ -0.62
HNRNPC-223	ENST00000556142	PPP4C	P60510	307 aa		11.18	□□□□□ -0.62
HNRNPC-223	ENST00000556142	AKNAD1	Q5T1N1	836 aa		11.18	□□□□□ -0.62
HNRNPC-223	ENST00000556142	C2CD5	Q86YS7	1000 aa		11.18	□□□□□ -0.62
HNRNPC-223	ENST00000556142	IGDCC4	Q8TDY8	1250 aa		11.18	□□□□□ -0.62
HNRNPC-223	ENST00000556142	LLPH	Q9BRT6	129 aa	Known RBP	11.18	□□□□□ -0.62
HNRNPC-223	ENST00000556142	LMBRD1	Q9NUN5	540 aa		11.18	□□□□□ -0.62
HNRNPC-223	ENST00000556142	WDR33	Q9C0J8	1336 aa	Known RBP	11.18	□□□□□ -0.62
HNRNPC-223	ENST00000556142	MAST2	Q6P0Q8	1798 aa		11.18	□□□□□ -0.62
HNRNPC-223	ENST00000556142		B4E1Z4	1266 aa		11.17	□□□□□ -0.62

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