RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 FAM181BA6NEQ2 426 aa5.44□□□□□ -1.54
SRP54-209ENST00000555746 DDX3YO15523 660 aaKnown RBP5.44□□□□□ -1.54
SRP54-209ENST00000555746 GREM1O60565 184 aa5.44□□□□□ -1.54
SRP54-209ENST00000555746 ECEL1O95672 775 aa5.44□□□□□ -1.54
SRP54-209ENST00000555746 PF4P02776 101 aa5.44□□□□□ -1.54
SRP54-209ENST00000555746 COL8A1P27658 744 aa5.44□□□□□ -1.54
SRP54-209ENST00000555746 NLRP12P59046 1061 aa5.44□□□□□ -1.54
SRP54-209ENST00000555746 ZC3H6P61129 1189 aaKnown RBP5.44□□□□□ -1.54
SRP54-209ENST00000555746 CAMK2GQ13555 558 aaPredicted RBP5.44□□□□□ -1.54
SRP54-209ENST00000555746 HP1BP3Q5SSJ5 553 aaPredicted RBP5.44□□□□□ -1.54
SRP54-209ENST00000555746 FBXO41Q8TF61 875 aa5.44□□□□□ -1.54
SRP54-209ENST00000555746 GAL3ST3Q96A11 431 aa5.44□□□□□ -1.54
SRP54-209ENST00000555746 MRPL18Q9H0U6 180 aaKnown RBP5.44□□□□□ -1.54
SRP54-209ENST00000555746 ADAMTS1Q9UHI8 967 aa5.44□□□□□ -1.54
SRP54-209ENST00000555746 MEGF11A6BM72 1044 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 MINDY4BA8MYZ0 360 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 F6X3S4 739 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 FAM229AH3BQW9 127 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 GJA8P48165 433 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 HNRNPUQ00839 825 aaKnown RBP eCLIP5.43□□□□□ -1.54
SRP54-209ENST00000555746 EXOSC6Q5RKV6 272 aaKnown RBP5.43□□□□□ -1.54
SRP54-209ENST00000555746 FBXL19Q6PCT2 694 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 TMEM130Q8N3G9 435 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 UBASH3BQ8TF42 649 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 TINF2Q9BSI4 451 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 USP26Q9BXU7 913 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 MIR1-1HGQ9H1L0 117 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 ACBD3Q9H3P7 528 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 CCDC86Q9H6F5 360 aaKnown RBP5.43□□□□□ -1.54
SRP54-209ENST00000555746 CCSER2Q9H7U1 834 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 CBX8Q9HC52 389 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 PCDHB5Q9Y5E4 795 aa5.43□□□□□ -1.54
SRP54-209ENST00000555746 ROBO2Q9HCK4 1378 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 FAM221AA4D161 298 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 DLGAP3O95886 979 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 SELPP16109 830 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 DUOXA2Q1HG44 320 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 KIF4BQ2VIQ3 1234 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 MAP1SQ66K74 1059 aaPredicted RBP5.42□□□□□ -1.54
SRP54-209ENST00000555746 KIAA1211Q6ZU35 1233 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.42□□□□□ -1.54
SRP54-209ENST00000555746 KIAA0825Q8IV33 1275 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 RASGRP4Q8TDF6 673 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 GPBAR1Q8TDU6 330 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 ZNF296Q8WUU4 475 aaPredicted RBP5.42□□□□□ -1.54
SRP54-209ENST00000555746 GATAD2BQ8WXI9 593 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 KCNB2Q92953 911 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 LENG1Q96BZ8 264 aaPredicted RBP5.42□□□□□ -1.54
SRP54-209ENST00000555746 SPON2Q9BUD6 331 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 NT5C1AQ9BXI3 368 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 LRRC3Q9BY71 257 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 TMPRSS13Q9BYE2 586 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 SUGCTQ9HAC7 445 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 STK17AQ9UEE5 414 aa5.42□□□□□ -1.54
SRP54-209ENST00000555746 SUPT16HQ9Y5B9 1047 aaKnown RBP5.42□□□□□ -1.54
SRP54-209ENST00000555746 ZNF862O60290 1169 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 CILPO75339 1184 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 WISP1O95388 367 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 LMNB1P20700 586 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 FAM160A1Q05DH4 1040 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 PTPN11Q06124 597 aaPredicted RBP5.41□□□□□ -1.54
SRP54-209ENST00000555746 GRIK4Q16099 956 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 SNAP47Q5SQN1 464 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 MPRIPQ6WCQ1 1025 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 FAM196AQ6ZSG2 479 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 SLC43A3Q8NBI5 491 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 GOLM1Q8NBJ4 401 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 EAF1Q96JC9 268 aaPredicted RBP5.41□□□□□ -1.54
SRP54-209ENST00000555746 SPATA32Q96LK8 384 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 NACC1Q96RE7 527 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 WDR18Q9BV38 432 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 RUSC1Q9BVN2 902 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 RNF208Q9H0X6 261 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 PCDHGC5Q9Y5F6 944 aa5.41□□□□□ -1.54
SRP54-209ENST00000555746 C9orf172C9J069 976 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 F8W735 103 aaPredicted RBP5.4□□□□□ -1.54
SRP54-209ENST00000555746 RNF225M0QZC1 329 aaPredicted RBP5.4□□□□□ -1.54
SRP54-209ENST00000555746 AOC2O75106 756 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 F13A1P00488 732 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 TNNI2P48788 182 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 NRG1Q02297 640 aaPredicted RBP5.4□□□□□ -1.54
SRP54-209ENST00000555746 PAK2Q13177 524 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 SEPT6Q14141 434 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 MPP2Q14168 576 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 PDE3AQ14432 1141 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 NAALADL2Q58DX5 795 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 SHISA2Q6UWI4 295 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 BNC2Q6ZN30 1099 aaPredicted RBP5.4□□□□□ -1.54
SRP54-209ENST00000555746 Q6ZS46 218 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 ACAD11Q709F0 780 aa5.4□□□□□ -1.54
SRP54-209ENST00000555746 SMG8Q8ND04 991 aaKnown RBP5.4□□□□□ -1.54
SRP54-209ENST00000555746 ZC3H12CQ9C0D7 883 aaKnown RBP5.4□□□□□ -1.54
SRP54-209ENST00000555746 LIG1P18858 919 aa5.39□□□□□ -1.55
SRP54-209ENST00000555746 RPL6Q02878 288 aaKnown RBP5.39□□□□□ -1.55
SRP54-209ENST00000555746 GNL2Q13823 731 aaKnown RBP5.39□□□□□ -1.55
SRP54-209ENST00000555746 DIEXFQ68CQ4 756 aaKnown RBP5.39□□□□□ -1.55
SRP54-209ENST00000555746 SLITRK4Q8IW52 837 aa5.39□□□□□ -1.55
SRP54-209ENST00000555746 GPRASP2Q96D09 838 aa5.39□□□□□ -1.55
SRP54-209ENST00000555746 WDR89Q96FK6 387 aaPredicted RBP5.39□□□□□ -1.55
SRP54-209ENST00000555746 GMLQ99445 158 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms