RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 ST18O60284 1047 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 FGAP02671 866 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 DIXDC1Q155Q3 683 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 IMMTQ16891 758 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 STRIP1Q5VSL9 837 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 USP17L1Q7RTZ2 530 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 HSCBQ8IWL3 235 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 KCNB2Q92953 911 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 JAKMIP1Q96N16 626 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 MXD3Q9BW11 206 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 NACAP1Q9BZK3 213 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 FHDC1Q9C0D6 1143 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 TAOK3Q9H2K8 898 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 KCNQ5Q9NR82 932 aa11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 AATFQ9NY61 560 aaKnown RBP eCLIP11.51□□□□□ -0.57
HNRNPC-220ENST00000555585 BAG3O95817 575 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 CYP21A2P08686 494 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 PSMA5P28066 241 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 TDO2P48775 406 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 NEK4P51957 841 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 KRT32Q14532 448 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 NIM1KQ8IY84 436 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 IFNL3Q8IZI9 196 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 IL17RAQ96F46 866 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 RIOK1Q9BRS2 568 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 CRNKL1Q9BZJ0 848 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 NAPBQ9H115 298 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 TTF2Q9UNY4 1162 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 SUGT1Q9Y2Z0 365 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 MROH7-TTC4A0A0A0MT08 1334 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 SCN9AQ15858 1988 aa11.5□□□□□ -0.57
HNRNPC-220ENST00000555585 YDJCA8MPS7 323 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 GSG1L2A8MUP6 293 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 ZNF213O14771 459 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 FOXP2O15409 715 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 CASTP20810 708 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 SLC4A3P48751 1232 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 HAND2P61296 217 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 FKBP1AP62942 108 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 ALX1Q15699 326 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 ADCK5Q3MIX3 580 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 DACT2Q5SW24 774 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 CERS5Q8N5B7 392 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 SDR42E1Q8WUS8 393 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 SNX21Q969T3 373 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 TBC1D2Q9BYX2 928 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 UPF3BQ9BZI7 483 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 RPAP1Q9BWH6 1393 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 ZNF646O15015 1829 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 PSME4Q14997 1843 aa11.49□□□□□ -0.57
HNRNPC-220ENST00000555585 NFKBIEO00221 500 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 RAD17O75943 681 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 BTDP43251 543 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 SCNN1DP51172 638 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 RASSF7Q02833 373 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 TSGA10IPQ3SY00 556 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 KIAA0825Q8IV33 1275 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 JDP2Q8WYK2 163 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 TM6SF1Q9BZW5 370 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 EPB41L4AQ9HCS5 686 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 CYP46A1Q9Y6A2 500 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 TAF6LQ9Y6J9 622 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 LAMA4Q16363 1823 aa11.48□□□□□ -0.57
HNRNPC-220ENST00000555585 COL4A5P29400 1685 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 ZMYM6O95789 1325 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 LTBP3Q9NS15 1303 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 E7EWF7 191 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 CPA1P15085 419 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 PLCG2P16885 1265 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 USP5P45974 858 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 PPP4CP60510 307 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 BLOC1S2Q6QNY1 142 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 ARHGAP27Q6ZUM4 889 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 RUFY3Q7L099 469 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 CERS3Q8IU89 383 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 SH3RF3Q8TEJ3 882 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 FAM163AQ96GL9 167 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 NEK1Q96PY6 1258 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 SYT17Q9BSW7 474 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 PDRG1Q9NUG6 133 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 ZNRF3Q9ULT6 936 aa11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 BAZ2AQ9UIF9 1905 aaKnown RBP11.47□□□□□ -0.57
HNRNPC-220ENST00000555585 GAKO14976 1311 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 MYO3BQ8WXR4 1341 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 GPR75-ASB3A0A0A6YYF3 556 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 MINDY4BA8MYZ0 360 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 PSMD14O00487 310 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 CRKP46108 304 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 RBM5P52756 815 aaKnown RBP eCLIP11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 GIMAP6Q6P9H5 292 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 RSBN1LQ6PCB5 846 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 STOX1Q6ZVD7 989 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 NOL8Q76FK4 1167 aaKnown RBP11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 TEX11Q8IYF3 940 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 IL27Q8NEV9 243 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms