RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 POTEFA5A3E0 1075 aa15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 PHKA1P46020 1223 aa15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 RARSP54136 660 aaKnown RBP15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 DIXDC1Q155Q3 683 aa15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 CDC42EP5Q6NZY7 148 aa15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 MIGA2Q7L4E1 593 aa15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 ERO1BQ86YB8 467 aa15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 FAM151AQ8WW52 585 aa15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 WRNIP1Q96S55 665 aa15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 MEIS3Q99687 375 aa15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 EFCC1Q9HA90 598 aa15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 ZNF112Q9UJU3 913 aa15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 RBBP6Q7Z6E9 1792 aaKnown RBP15.25■□□□□ 0.03
MTHFD1-207ENST00000554677 RPAP1Q9BWH6 1393 aaPredicted RBP15.24■□□□□ 0.03
MTHFD1-207ENST00000554677 BTBD19C9JJ37 291 aa15.24■□□□□ 0.03
MTHFD1-207ENST00000554677 IRF6O14896 467 aa15.24■□□□□ 0.03
MTHFD1-207ENST00000554677 ADORA1P30542 326 aa15.24■□□□□ 0.03
MTHFD1-207ENST00000554677 INPP5BP32019 993 aa15.24■□□□□ 0.03
MTHFD1-207ENST00000554677 NFIAQ12857 509 aa15.24■□□□□ 0.03
MTHFD1-207ENST00000554677 TAF1CQ15572 869 aaPredicted RBP15.24■□□□□ 0.03
MTHFD1-207ENST00000554677 API5Q9BZZ5 524 aaKnown RBP15.24■□□□□ 0.03
MTHFD1-207ENST00000554677 COPRSQ9NQ92 184 aa15.24■□□□□ 0.03
MTHFD1-207ENST00000554677 TMOD2Q9NZR1 351 aa15.24■□□□□ 0.03
MTHFD1-207ENST00000554677 FAM198AQ9UFP1 575 aa15.24■□□□□ 0.03
MTHFD1-207ENST00000554677 SALL1Q9NSC2 1324 aa15.23■□□□□ 0.03
MTHFD1-207ENST00000554677 IL15P40933 162 aaPredicted RBP15.23■□□□□ 0.03
MTHFD1-207ENST00000554677 INTS3Q68E01 1043 aaKnown RBP15.23■□□□□ 0.03
MTHFD1-207ENST00000554677 ZFPM1Q8IX07 1006 aa15.23■□□□□ 0.03
MTHFD1-207ENST00000554677 ARMC5Q96C12 935 aa15.23■□□□□ 0.03
MTHFD1-207ENST00000554677 ZFYVE28Q9HCC9 887 aa15.23■□□□□ 0.03
MTHFD1-207ENST00000554677 LDHBP07195 334 aaKnown RBP15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 CETPP11597 493 aa15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 TIMM10P62072 90 aa15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 TCP10Q12799 353 aa15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 PPIL2Q13356 520 aa15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 PRPF38BQ5VTL8 546 aaKnown RBP15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 DCAF15Q66K64 600 aa15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 ARHGAP45Q92619 1136 aa15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 HOOK2Q96ED9 719 aa15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 ZNF341Q9BYN7 854 aa15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 DENND2AQ9ULE3 1009 aa15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.22■□□□□ 0.03
MTHFD1-207ENST00000554677 CCER2I3L3R5 266 aa15.21■□□□□ 0.03
MTHFD1-207ENST00000554677 SEMA3EO15041 775 aa15.21■□□□□ 0.03
MTHFD1-207ENST00000554677 TLR2O60603 784 aa15.21■□□□□ 0.03
MTHFD1-207ENST00000554677 PPATQ06203 517 aa15.21■□□□□ 0.03
MTHFD1-207ENST00000554677 SNAPC2Q13487 334 aa15.21■□□□□ 0.03
MTHFD1-207ENST00000554677 CCDC102BQ68D86 513 aa15.21■□□□□ 0.03
MTHFD1-207ENST00000554677 ZCCHC17Q9NP64 241 aaKnown RBP15.21■□□□□ 0.03
MTHFD1-207ENST00000554677 USP40Q9NVE5 1235 aa15.21■□□□□ 0.03
MTHFD1-207ENST00000554677 GNL3LQ9NVN8 582 aaKnown RBP15.21■□□□□ 0.03
MTHFD1-207ENST00000554677 DOCK3Q8IZD9 2030 aa15.21■□□□□ 0.02
MTHFD1-207ENST00000554677 MOGSQ13724 837 aa15.2■□□□□ 0.02
MTHFD1-207ENST00000554677 ARHGAP39Q9C0H5 1083 aa15.2■□□□□ 0.02
MTHFD1-207ENST00000554677 HDAC5Q9UQL6 1122 aa15.2■□□□□ 0.02
MTHFD1-207ENST00000554677 TNNQ9UQP3 1299 aa15.2■□□□□ 0.02
MTHFD1-207ENST00000554677 PHF20L1A8MW92 1017 aa15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 EN2P19622 333 aaPredicted RBP15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 MTX1Q13505 466 aa15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 RASGRF1Q13972 1273 aa15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 C17orf99Q6UX52 265 aa15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 SH3BP5LQ7L8J4 393 aa15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 FAM163AQ96GL9 167 aaPredicted RBP15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 ZNF333Q96JL9 665 aa15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 KCNH4Q9UQ05 1017 aa15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 PTCH2Q9Y6C5 1203 aa15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 ATRNL1Q5VV63 1379 aa15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 PTPRFP10586 1907 aa15.19■□□□□ 0.02
MTHFD1-207ENST00000554677 GAKO14976 1311 aa15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 PHIPQ8WWQ0 1821 aa15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 DOCK2Q92608 1830 aa15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 CTGFP29279 349 aa15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 MAP3K10Q02779 954 aa15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 TFCP2Q12800 502 aa15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 NOL9Q5SY16 702 aaKnown RBP15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 ZNF384Q8TF68 577 aa15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 XAGE2Q96GT9 111 aa15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 IDI2Q9BXS1 227 aa15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 CEP290O15078 2479 aa15.18■□□□□ 0.02
MTHFD1-207ENST00000554677 RFX7Q2KHR2 1363 aa15.17■□□□□ 0.02
MTHFD1-207ENST00000554677 A0A1B0GUL7 405 aa15.17■□□□□ 0.02
MTHFD1-207ENST00000554677 SRGAP3O43295 1099 aa15.17■□□□□ 0.02
MTHFD1-207ENST00000554677 GNAI3P08754 354 aa15.17■□□□□ 0.02
MTHFD1-207ENST00000554677 SLURP2P0DP57 97 aa15.17■□□□□ 0.02
MTHFD1-207ENST00000554677 RGS3P49796 1198 aa15.17■□□□□ 0.02
MTHFD1-207ENST00000554677 LACTBP83111 547 aaPredicted RBP15.17■□□□□ 0.02
MTHFD1-207ENST00000554677 ANKRD23Q86SG2 305 aa15.17■□□□□ 0.02
MTHFD1-207ENST00000554677 DDX4Q9NQI0 724 aaKnown RBP15.17■□□□□ 0.02
MTHFD1-207ENST00000554677 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
MTHFD1-207ENST00000554677 ADGRA2Q96PE1 1338 aa15.17■□□□□ 0.02
MTHFD1-207ENST00000554677 MGAMO43451 1857 aa15.16■□□□□ 0.02
MTHFD1-207ENST00000554677 ENTPD3O75355 529 aa15.16■□□□□ 0.02
MTHFD1-207ENST00000554677 WDHD1O75717 1129 aaPredicted RBP15.16■□□□□ 0.02
MTHFD1-207ENST00000554677 BCAR3O75815 825 aa15.16■□□□□ 0.02
MTHFD1-207ENST00000554677 PRKCSHP14314 528 aaPredicted RBP15.16■□□□□ 0.02
MTHFD1-207ENST00000554677 TRIM27P14373 513 aa15.16■□□□□ 0.02
MTHFD1-207ENST00000554677 ARHGEF6Q15052 776 aa15.16■□□□□ 0.02
MTHFD1-207ENST00000554677 GPAT2Q6NUI2 795 aa15.16■□□□□ 0.02
MTHFD1-207ENST00000554677 ZGPATQ8N5A5 531 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms