RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 TBC1D32Q96NH3 1257 aa8.16□□□□□ -1.1
LINC00517-202ENST00000554257 DSCC1Q9BVC3 393 aa8.16□□□□□ -1.1
LINC00517-202ENST00000554257 MYH6P13533 1939 aa8.16□□□□□ -1.1
LINC00517-202ENST00000554257 WDHD1O75717 1129 aaPredicted RBP8.16□□□□□ -1.1
LINC00517-202ENST00000554257 LDHBP07195 334 aaKnown RBP8.16□□□□□ -1.1
LINC00517-202ENST00000554257 HSPA4P34932 840 aa8.16□□□□□ -1.1
LINC00517-202ENST00000554257 CWC27Q6UX04 472 aaKnown RBP8.16□□□□□ -1.1
LINC00517-202ENST00000554257 ZBTB12Q9Y330 459 aaPredicted RBP8.16□□□□□ -1.1
LINC00517-202ENST00000554257 GPAA1O43292 621 aa8.16□□□□□ -1.1
LINC00517-202ENST00000554257 NPM3O75607 178 aaKnown RBP8.16□□□□□ -1.1
LINC00517-202ENST00000554257 RAD17O75943 681 aa8.16□□□□□ -1.1
LINC00517-202ENST00000554257 MMP14P50281 582 aa8.16□□□□□ -1.1
LINC00517-202ENST00000554257 CHAF1AQ13111 956 aaPredicted RBP8.16□□□□□ -1.1
LINC00517-202ENST00000554257 METTL16Q86W50 562 aaKnown RBP8.16□□□□□ -1.1
LINC00517-202ENST00000554257 GPC2Q8N158 579 aa8.16□□□□□ -1.1
LINC00517-202ENST00000554257 DPF2Q92785 391 aa8.16□□□□□ -1.1
LINC00517-202ENST00000554257 DDX4Q9NQI0 724 aaKnown RBP8.16□□□□□ -1.1
LINC00517-202ENST00000554257 PALD1Q9ULE6 856 aa8.16□□□□□ -1.1
LINC00517-202ENST00000554257 PRKAB2O43741 272 aa8.15□□□□□ -1.1
LINC00517-202ENST00000554257 RPS12P25398 132 aaKnown RBP8.15□□□□□ -1.1
LINC00517-202ENST00000554257 CRKP46108 304 aa8.15□□□□□ -1.1
LINC00517-202ENST00000554257 MAP3K12Q12852 859 aa8.15□□□□□ -1.1
LINC00517-202ENST00000554257 SPTY2D1Q68D10 685 aaPredicted RBP8.15□□□□□ -1.1
LINC00517-202ENST00000554257 ARHGAP27Q6ZUM4 889 aa8.15□□□□□ -1.1
LINC00517-202ENST00000554257 VPS37DQ86XT2 251 aa8.15□□□□□ -1.1
LINC00517-202ENST00000554257 SH3RF3Q8TEJ3 882 aaPredicted RBP8.15□□□□□ -1.1
LINC00517-202ENST00000554257 HIRAP54198 1017 aaPredicted RBP8.15□□□□□ -1.1
LINC00517-202ENST00000554257 C9orf131Q5VYM1 1079 aa8.15□□□□□ -1.1
LINC00517-202ENST00000554257 ZBTB47Q9UFB7 747 aaPredicted RBP8.15□□□□□ -1.1
LINC00517-202ENST00000554257 FAM198AQ9UFP1 575 aa8.15□□□□□ -1.1
LINC00517-202ENST00000554257 ANAPC4Q9UJX5 808 aa8.15□□□□□ -1.1
LINC00517-202ENST00000554257 RBBP6Q7Z6E9 1792 aaKnown RBP8.15□□□□□ -1.11
LINC00517-202ENST00000554257 SPDYE2BA6NHP3 402 aa8.15□□□□□ -1.11
LINC00517-202ENST00000554257 IDH1O75874 414 aaKnown RBP8.15□□□□□ -1.11
LINC00517-202ENST00000554257 SPDYE6P0CI01 402 aa8.15□□□□□ -1.11
LINC00517-202ENST00000554257 CIAPIN1Q6FI81 312 aa8.15□□□□□ -1.11
LINC00517-202ENST00000554257 CDC42EP5Q6NZY7 148 aa8.15□□□□□ -1.11
LINC00517-202ENST00000554257 STOX1Q6ZVD7 989 aa8.15□□□□□ -1.11
LINC00517-202ENST00000554257 SH3BP5LQ7L8J4 393 aa8.15□□□□□ -1.11
LINC00517-202ENST00000554257 IDI2Q9BXS1 227 aa8.15□□□□□ -1.11
LINC00517-202ENST00000554257 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.15□□□□□ -1.11
LINC00517-202ENST00000554257 MBD4O95243 580 aa8.14□□□□□ -1.11
LINC00517-202ENST00000554257 NAA16Q6N069 864 aaPredicted RBP8.14□□□□□ -1.11
LINC00517-202ENST00000554257 ZSCAN25Q6NSZ9 544 aa8.14□□□□□ -1.11
LINC00517-202ENST00000554257 RASEFQ8IZ41 740 aa8.14□□□□□ -1.11
LINC00517-202ENST00000554257 ARMT1Q9H993 441 aa8.14□□□□□ -1.11
LINC00517-202ENST00000554257 GPRC5DQ9NZD1 345 aa8.14□□□□□ -1.11
LINC00517-202ENST00000554257 THSD7BQ9C0I4 1608 aa8.14□□□□□ -1.11
LINC00517-202ENST00000554257 CYP7A1P22680 504 aa8.14□□□□□ -1.11
LINC00517-202ENST00000554257 GMPSP49915 693 aaPredicted RBP8.14□□□□□ -1.11
LINC00517-202ENST00000554257 GIMAP6Q6P9H5 292 aa8.14□□□□□ -1.11
LINC00517-202ENST00000554257 TSHZ2Q9NRE2 1034 aa8.14□□□□□ -1.11
LINC00517-202ENST00000554257 ASTN2O75129 1339 aaPredicted RBP8.13□□□□□ -1.11
LINC00517-202ENST00000554257 FLT1P17948 1338 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 BTDP43251 543 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 MAP3K10Q02779 954 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 SPDYE2Q495Y8 402 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 PRMT6Q96LA8 375 aaPredicted RBP8.13□□□□□ -1.11
LINC00517-202ENST00000554257 DCP1AQ9NPI6 582 aaPredicted RBP8.13□□□□□ -1.11
LINC00517-202ENST00000554257 LRP2BPQ9P2M1 347 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 ABCF2Q9UG63 623 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 TTF2Q9UNY4 1162 aaKnown RBP8.13□□□□□ -1.11
LINC00517-202ENST00000554257 COL11A1P12107 1806 aaPredicted RBP8.13□□□□□ -1.11
LINC00517-202ENST00000554257 PATL2C9JE40 543 aaKnown RBP8.13□□□□□ -1.11
LINC00517-202ENST00000554257 GRIN3BO60391 1043 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 GABPAQ06546 454 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 SBK1Q52WX2 424 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 MIGA1Q8NAN2 632 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 MAGEB6P1A0A0J9YX57 407 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 FGAP02671 866 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 CYP21A2P08686 494 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 CTR9Q6PD62 1173 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 KIAA0825Q8IV33 1275 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 ZFPM1Q8IX07 1006 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 TRPM4Q8TD43 1214 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 TEPSINQ96N21 525 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 BCL11AQ9H165 835 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 TMX4Q9H1E5 349 aaPredicted RBP8.13□□□□□ -1.11
LINC00517-202ENST00000554257 DIAPH3Q9NSV4 1193 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 AATFQ9NY61 560 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC00517-202ENST00000554257 RNF181Q9P0P0 153 aa8.13□□□□□ -1.11
LINC00517-202ENST00000554257 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC00517-202ENST00000554257 PLIN4Q96Q06 1357 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 WNT10BO00744 389 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 SLC27A2O14975 620 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 NOVP48745 357 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 GSTO1P78417 241 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 TNIP1Q15025 636 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 DNAJC18Q9H819 358 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 MYOZ2Q9NPC6 264 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 RAI14Q9P0K7 980 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 SNX14Q9Y5W7 946 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 NFIAQ12857 509 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 CFAP100Q494V2 611 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 TBC1D10CQ8IV04 446 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 IFNL3Q8IZI9 196 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 SDR42E1Q8WUS8 393 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 RBM8AQ9Y5S9 174 aaKnown RBP8.12□□□□□ -1.11
LINC00517-202ENST00000554257 GLTPD2A6NH11 291 aa8.12□□□□□ -1.11
LINC00517-202ENST00000554257 ADCK5Q3MIX3 580 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms