RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 FBXL19Q6PCT2 694 aa8.31□□□□□ -1.08
FOXN3-206ENST00000554005 KIAA0825Q8IV33 1275 aa8.31□□□□□ -1.08
FOXN3-206ENST00000554005 ZNF296Q8WUU4 475 aaPredicted RBP8.31□□□□□ -1.08
FOXN3-206ENST00000554005 KCNB2Q92953 911 aa8.31□□□□□ -1.08
FOXN3-206ENST00000554005 SPON2Q9BUD6 331 aa8.31□□□□□ -1.08
FOXN3-206ENST00000554005 MIR1-1HGQ9H1L0 117 aa8.31□□□□□ -1.08
FOXN3-206ENST00000554005 CCDC86Q9H6F5 360 aaKnown RBP8.31□□□□□ -1.08
FOXN3-206ENST00000554005 CACNA2D2Q9NY47 1150 aa8.31□□□□□ -1.08
FOXN3-206ENST00000554005 TRIM37O94972 964 aa8.3□□□□□ -1.08
FOXN3-206ENST00000554005 WISP1O95388 367 aa8.3□□□□□ -1.08
FOXN3-206ENST00000554005 LMNB1P20700 586 aa8.3□□□□□ -1.08
FOXN3-206ENST00000554005 PTPN11Q06124 597 aaPredicted RBP8.3□□□□□ -1.08
FOXN3-206ENST00000554005 PAK2Q13177 524 aa8.3□□□□□ -1.08
FOXN3-206ENST00000554005 PRRT3Q5FWE3 981 aa8.3□□□□□ -1.08
FOXN3-206ENST00000554005 SCARA3Q6AZY7 606 aa8.3□□□□□ -1.08
FOXN3-206ENST00000554005 BNC2Q6ZN30 1099 aaPredicted RBP8.3□□□□□ -1.08
FOXN3-206ENST00000554005 GOLM1Q8NBJ4 401 aa8.3□□□□□ -1.08
FOXN3-206ENST00000554005 KRT82Q9NSB4 513 aa8.3□□□□□ -1.08
FOXN3-206ENST00000554005 INPP5FQ9Y2H2 1132 aa8.3□□□□□ -1.08
FOXN3-206ENST00000554005 GREM1O60565 184 aa8.29□□□□□ -1.08
FOXN3-206ENST00000554005 GJA8P48165 433 aa8.29□□□□□ -1.08
FOXN3-206ENST00000554005 DUOXA2Q1HG44 320 aa8.29□□□□□ -1.08
FOXN3-206ENST00000554005 CCDC84Q86UT8 332 aaPredicted RBP8.29□□□□□ -1.08
FOXN3-206ENST00000554005 GPBAR1Q8TDU6 330 aa8.29□□□□□ -1.08
FOXN3-206ENST00000554005 CAPN10Q9HC96 672 aa8.29□□□□□ -1.08
FOXN3-206ENST00000554005 SUPT16HQ9Y5B9 1047 aaKnown RBP8.29□□□□□ -1.08
FOXN3-206ENST00000554005 ZNF862O60290 1169 aa8.28□□□□□ -1.08
FOXN3-206ENST00000554005 F13A1P00488 732 aa8.28□□□□□ -1.08
FOXN3-206ENST00000554005 COL8A1P27658 744 aa8.28□□□□□ -1.08
FOXN3-206ENST00000554005 PDE3AQ14432 1141 aa8.28□□□□□ -1.08
FOXN3-206ENST00000554005 IGF2-ASQ6U949 168 aa8.28□□□□□ -1.08
FOXN3-206ENST00000554005 SCARF2Q96GP6 870 aaPredicted RBP8.28□□□□□ -1.08
FOXN3-206ENST00000554005 EAF1Q96JC9 268 aaPredicted RBP8.28□□□□□ -1.08
FOXN3-206ENST00000554005 FAM221AA4D161 298 aa8.27□□□□□ -1.09
FOXN3-206ENST00000554005 SPATA31C1P0DKV0 1188 aa8.27□□□□□ -1.09
FOXN3-206ENST00000554005 GRIK4Q16099 956 aa8.27□□□□□ -1.09
FOXN3-206ENST00000554005 SHISA2Q6UWI4 295 aa8.27□□□□□ -1.09
FOXN3-206ENST00000554005 FAM196AQ6ZSG2 479 aa8.27□□□□□ -1.09
FOXN3-206ENST00000554005 KIAA1211Q6ZU35 1233 aa8.27□□□□□ -1.09
FOXN3-206ENST00000554005 GATAD2BQ8WXI9 593 aa8.27□□□□□ -1.09
FOXN3-206ENST00000554005 JARID2Q92833 1246 aaPredicted RBP8.27□□□□□ -1.09
FOXN3-206ENST00000554005 GPRASP2Q96D09 838 aa8.27□□□□□ -1.09
FOXN3-206ENST00000554005 WDR89Q96FK6 387 aaPredicted RBP8.27□□□□□ -1.09
FOXN3-206ENST00000554005 NT5C1AQ9BXI3 368 aa8.27□□□□□ -1.09
FOXN3-206ENST00000554005 SELPP16109 830 aa8.26□□□□□ -1.09
FOXN3-206ENST00000554005 LIG1P18858 919 aa8.26□□□□□ -1.09
FOXN3-206ENST00000554005 CRKP46108 304 aa8.26□□□□□ -1.09
FOXN3-206ENST00000554005 KIF4BQ2VIQ3 1234 aa8.26□□□□□ -1.09
FOXN3-206ENST00000554005 HP1BP3Q5SSJ5 553 aaPredicted RBP8.26□□□□□ -1.09
FOXN3-206ENST00000554005 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.26□□□□□ -1.09
FOXN3-206ENST00000554005 ACAD11Q709F0 780 aa8.26□□□□□ -1.09
FOXN3-206ENST00000554005 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.26□□□□□ -1.09
FOXN3-206ENST00000554005 FBXO27Q8NI29 283 aa8.26□□□□□ -1.09
FOXN3-206ENST00000554005 ACSBG1Q96GR2 724 aa8.26□□□□□ -1.09
FOXN3-206ENST00000554005 MRPL18Q9H0U6 180 aaKnown RBP8.26□□□□□ -1.09
FOXN3-206ENST00000554005 UBP1Q9NZI7 540 aa8.26□□□□□ -1.09
FOXN3-206ENST00000554005 CILPO75339 1184 aa8.25□□□□□ -1.09
FOXN3-206ENST00000554005 GNL2Q13823 731 aaKnown RBP8.25□□□□□ -1.09
FOXN3-206ENST00000554005 SLC43A3Q8NBI5 491 aa8.25□□□□□ -1.09
FOXN3-206ENST00000554005 RASGRP4Q8TDF6 673 aa8.25□□□□□ -1.09
FOXN3-206ENST00000554005 WDR18Q9BV38 432 aa8.25□□□□□ -1.09
FOXN3-206ENST00000554005 RUSC1Q9BVN2 902 aa8.25□□□□□ -1.09
FOXN3-206ENST00000554005 LRRC3Q9BY71 257 aa8.25□□□□□ -1.09
FOXN3-206ENST00000554005 TMPRSS13Q9BYE2 586 aa8.25□□□□□ -1.09
FOXN3-206ENST00000554005 PCDHA4Q9UN74 947 aa8.25□□□□□ -1.09
FOXN3-206ENST00000554005 TLR3O15455 904 aaKnown RBP8.24□□□□□ -1.09
FOXN3-206ENST00000554005 AOC2O75106 756 aa8.24□□□□□ -1.09
FOXN3-206ENST00000554005 CDK8P49336 464 aa8.24□□□□□ -1.09
FOXN3-206ENST00000554005 APOBRQ0VD83 1088 aa8.24□□□□□ -1.09
FOXN3-206ENST00000554005 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
FOXN3-206ENST00000554005 PCDHGC5Q9Y5F6 944 aa8.24□□□□□ -1.09
FOXN3-206ENST00000554005 CCDC180Q9P1Z9 1646 aa8.24□□□□□ -1.09
FOXN3-206ENST00000554005 ROBO2Q9HCK4 1378 aa8.23□□□□□ -1.09
FOXN3-206ENST00000554005 MEGF11A6BM72 1044 aa8.23□□□□□ -1.09
FOXN3-206ENST00000554005 HNRNPUQ00839 825 aaKnown RBP eCLIP8.23□□□□□ -1.09
FOXN3-206ENST00000554005 RPL6Q02878 288 aaKnown RBP8.23□□□□□ -1.09
FOXN3-206ENST00000554005 MPP2Q14168 576 aa8.23□□□□□ -1.09
FOXN3-206ENST00000554005 AGGF1Q8N302 714 aaeCLIP8.23□□□□□ -1.09
FOXN3-206ENST00000554005 RNF208Q9H0X6 261 aa8.23□□□□□ -1.09
FOXN3-206ENST00000554005 FAM181BA6NEQ2 426 aa8.22□□□□□ -1.09
FOXN3-206ENST00000554005 F8W735 103 aaPredicted RBP8.22□□□□□ -1.09
FOXN3-206ENST00000554005 BPNT1O95861 308 aa8.22□□□□□ -1.09
FOXN3-206ENST00000554005 INPP5AQ14642 412 aa8.22□□□□□ -1.09
FOXN3-206ENST00000554005 WIPI1Q5MNZ9 446 aaPredicted RBP8.22□□□□□ -1.09
FOXN3-206ENST00000554005 LRFN4Q6PJG9 635 aa8.22□□□□□ -1.09
FOXN3-206ENST00000554005 SLITRK4Q8IW52 837 aa8.22□□□□□ -1.09
FOXN3-206ENST00000554005 TMEM130Q8N3G9 435 aa8.22□□□□□ -1.09
FOXN3-206ENST00000554005 LENG1Q96BZ8 264 aaPredicted RBP8.22□□□□□ -1.09
FOXN3-206ENST00000554005 SUGCTQ9HAC7 445 aa8.22□□□□□ -1.09
FOXN3-206ENST00000554005 RAD18Q9NS91 495 aa8.22□□□□□ -1.09
FOXN3-206ENST00000554005 SYNGAP1Q96PV0 1343 aa8.22□□□□□ -1.09
FOXN3-206ENST00000554005 SEZ6Q53EL9 994 aa8.21□□□□□ -1.1
FOXN3-206ENST00000554005 ZC3H12AQ5D1E8 599 aaKnown RBP8.21□□□□□ -1.1
FOXN3-206ENST00000554005 NUTM2GQ5VZR2 741 aa8.21□□□□□ -1.1
FOXN3-206ENST00000554005 DIEXFQ68CQ4 756 aaKnown RBP8.21□□□□□ -1.1
FOXN3-206ENST00000554005 REC114Q7Z4M0 266 aa8.21□□□□□ -1.1
FOXN3-206ENST00000554005 SMG8Q8ND04 991 aaKnown RBP8.21□□□□□ -1.1
FOXN3-206ENST00000554005 SREK1Q8WXA9 508 aaKnown RBP8.21□□□□□ -1.1
FOXN3-206ENST00000554005 NKD1Q969G9 470 aa8.21□□□□□ -1.1
FOXN3-206ENST00000554005 PLPPR2Q96GM1 343 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms