RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 ELP3Q9H9T3 547 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 ZFYVE28Q9HCC9 887 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 USP40Q9NVE5 1235 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 ABCF2Q9UG63 623 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 FZD1Q9UP38 647 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 POLR2AP24928 1970 aaKnown RBP8.04□□□□□ -1.12
FOXN3-205ENST00000553904 PDS5AQ29RF7 1337 aaKnown RBP8.03□□□□□ -1.12
FOXN3-205ENST00000553904 ENTPD3O75355 529 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 PRDX5P30044 214 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 PHKA1P46020 1223 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 ATP8B2P98198 1209 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 PPATQ06203 517 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 TCP10Q12799 353 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 SNAPC2Q13487 334 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 KIF22Q14807 665 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 GRIK5Q16478 980 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 CDC42EP5Q6NZY7 148 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.03□□□□□ -1.12
FOXN3-205ENST00000553904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.03□□□□□ -1.12
FOXN3-205ENST00000553904 FAM163AQ96GL9 167 aaPredicted RBP8.03□□□□□ -1.12
FOXN3-205ENST00000553904 WRNIP1Q96S55 665 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 NOL10Q9BSC4 688 aaKnown RBP8.03□□□□□ -1.12
FOXN3-205ENST00000553904 ZCCHC17Q9NP64 241 aaKnown RBP8.03□□□□□ -1.12
FOXN3-205ENST00000553904 SPEF2Q9C093 1822 aa8.03□□□□□ -1.12
FOXN3-205ENST00000553904 CCL15-CCL14A0A0B4J2E2 113 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 SPDYE5A6NIY4 337 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 CACNB3P54284 484 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 SP3Q02447 781 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 VGLL4Q14135 290 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 CCL15Q16663 113 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 HSP90AB4PQ58FF6 505 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 MIGA2Q7L4E1 593 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 ZSCAN29Q8IWY8 852 aaPredicted RBP8.02□□□□□ -1.13
FOXN3-205ENST00000553904 TMEM57Q8N5G2 664 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 MS4A4AQ96JQ5 239 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 IDI2Q9BXS1 227 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 GPR108Q9NPR9 543 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 LRP2BPQ9P2M1 347 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 DAGLAQ9Y4D2 1042 aa8.02□□□□□ -1.13
FOXN3-205ENST00000553904 ZBTB7BO15156 539 aaPredicted RBP8.01□□□□□ -1.13
FOXN3-205ENST00000553904 NPM3O75607 178 aaKnown RBP8.01□□□□□ -1.13
FOXN3-205ENST00000553904 SURF6O75683 361 aaKnown RBP8.01□□□□□ -1.13
FOXN3-205ENST00000553904 BAG3O95817 575 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 GNRH1P01148 92 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 PLCG2P16885 1265 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 PPIL2Q13356 520 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 TAF1CQ15572 869 aaPredicted RBP8.01□□□□□ -1.13
FOXN3-205ENST00000553904 DIXDC1Q155Q3 683 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 NBPF11Q86T75 865 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 ITPRIPQ8IWB1 547 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 SPATA5Q8NB90 893 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 OTUD5Q96G74 571 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 EFCC1Q9HA90 598 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 PICK1Q9NRD5 415 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 ZNF112Q9UJU3 913 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 HPS5Q9UPZ3 1129 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 TRIM17Q9Y577 477 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 AOX1Q06278 1338 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 ZBED9Q6R2W3 1325 aa8.01□□□□□ -1.13
FOXN3-205ENST00000553904 RPAP1Q9BWH6 1393 aaPredicted RBP8□□□□□ -1.13
FOXN3-205ENST00000553904 GPR75-ASB3A0A0A6YYF3 556 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 PNMA6EA0A0J9YXQ4 647 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 IGF2BP3O00425 579 aaKnown RBP eCLIP8□□□□□ -1.13
FOXN3-205ENST00000553904 CXCL11O14625 94 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 HOXD10P28358 340 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 ADORA1P30542 326 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 CRHR2Q13324 411 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 RASGRF1Q13972 1273 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 TTC39AQ5SRH9 613 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 TMED8Q6PL24 325 aaPredicted RBP8□□□□□ -1.13
FOXN3-205ENST00000553904 FASTKD5Q7L8L6 764 aaKnown RBP8□□□□□ -1.13
FOXN3-205ENST00000553904 CERS3Q8IU89 383 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 ERC1Q8IUD2 1116 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 SSH3Q8TE77 659 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 ZKSCAN4Q969J2 545 aaPredicted RBP8□□□□□ -1.13
FOXN3-205ENST00000553904 ZNF512BQ96KM6 892 aaPredicted RBP8□□□□□ -1.13
FOXN3-205ENST00000553904 PTPN18Q99952 460 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 RAI14Q9P0K7 980 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 HMG20BQ9P0W2 317 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 GAKO14976 1311 aa8□□□□□ -1.13
FOXN3-205ENST00000553904 IRF6O14896 467 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 TBC1D12O60347 775 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 TLR2O60603 784 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 CTNND1O60716 968 aaKnown RBP7.99□□□□□ -1.13
FOXN3-205ENST00000553904 HMMRO75330 724 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 ARID4AP29374 1257 aaPredicted RBP7.99□□□□□ -1.13
FOXN3-205ENST00000553904 GJA5P36382 358 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 BTDP43251 543 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 RGS3P49796 1198 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 PRMT2P55345 433 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 MECOMQ03112 1051 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 POLA2Q14181 598 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 TNNI3KQ59H18 835 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 ANKRD23Q86SG2 305 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 BRI3BPQ8WY22 251 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 TMEM106CQ9BVX2 250 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 TBC1D2Q9BYX2 928 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 DHX36Q9H2U1 1008 aaKnown RBP7.99□□□□□ -1.13
FOXN3-205ENST00000553904 FAM198AQ9UFP1 575 aa7.99□□□□□ -1.13
FOXN3-205ENST00000553904 NOP58Q9Y2X3 529 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms