RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 GPR75-ASB3A0A0A6YYF3 556 aa16.89■□□□□ 0.29
PRKCH-206ENST00000553830 EIF5BO60841 1220 aaKnown RBP16.89■□□□□ 0.29
PRKCH-206ENST00000553830 DDNO94850 711 aaPredicted RBP16.89■□□□□ 0.29
PRKCH-206ENST00000553830 HSPD1P10809 573 aaKnown RBP16.89■□□□□ 0.29
PRKCH-206ENST00000553830 HHIPL2Q6UWX4 724 aa16.89■□□□□ 0.29
PRKCH-206ENST00000553830 TEX11Q8IYF3 940 aa16.89■□□□□ 0.29
PRKCH-206ENST00000553830 USP26Q9BXU7 913 aa16.89■□□□□ 0.29
PRKCH-206ENST00000553830 CRNKL1Q9BZJ0 848 aaKnown RBP16.89■□□□□ 0.29
PRKCH-206ENST00000553830 RBM8AQ9Y5S9 174 aaKnown RBP16.89■□□□□ 0.29
PRKCH-206ENST00000553830 GOLGB1Q14789 3259 aaKnown RBP16.88■□□□□ 0.29
PRKCH-206ENST00000553830 LAMB1P07942 1786 aa16.88■□□□□ 0.29
PRKCH-206ENST00000553830 IGSF3O75054 1194 aa16.88■□□□□ 0.29
PRKCH-206ENST00000553830 RPS12P25398 132 aaKnown RBP16.88■□□□□ 0.29
PRKCH-206ENST00000553830 USP5P45974 858 aa16.88■□□□□ 0.29
PRKCH-206ENST00000553830 DLGAP5Q15398 846 aa16.88■□□□□ 0.29
PRKCH-206ENST00000553830 SLC4A8Q2Y0W8 1093 aa16.88■□□□□ 0.29
PRKCH-206ENST00000553830 GPC2Q8N158 579 aa16.88■□□□□ 0.29
PRKCH-206ENST00000553830 USP40Q9NVE5 1235 aa16.88■□□□□ 0.29
PRKCH-206ENST00000553830 CNOT7Q9UIV1 285 aaKnown RBP16.88■□□□□ 0.29
PRKCH-206ENST00000553830 SERPINA10Q9UK55 444 aa16.88■□□□□ 0.29
PRKCH-206ENST00000553830 LAMA4Q16363 1823 aa16.87■□□□□ 0.29
PRKCH-206ENST00000553830 GNAT2P19087 354 aa16.87■□□□□ 0.29
PRKCH-206ENST00000553830 MCCP23508 829 aa16.87■□□□□ 0.29
PRKCH-206ENST00000553830 TDO2P48775 406 aa16.87■□□□□ 0.29
PRKCH-206ENST00000553830 CACNB3P54284 484 aa16.87■□□□□ 0.29
PRKCH-206ENST00000553830 HDLBPQ00341 1268 aaKnown RBP16.87■□□□□ 0.29
PRKCH-206ENST00000553830 PICALMQ13492 652 aa16.87■□□□□ 0.29
PRKCH-206ENST00000553830 TMED8Q6PL24 325 aaPredicted RBP16.87■□□□□ 0.29
PRKCH-206ENST00000553830 TGFBRAP1Q8WUH2 860 aa16.87■□□□□ 0.29
PRKCH-206ENST00000553830 FAM163AQ96GL9 167 aaPredicted RBP16.87■□□□□ 0.29
PRKCH-206ENST00000553830 ZDHHC15Q96MV8 337 aa16.87■□□□□ 0.29
PRKCH-206ENST00000553830 C22orf23Q9BZE7 217 aa16.87■□□□□ 0.29
PRKCH-206ENST00000553830 CLRN2A0PK11 232 aa16.86■□□□□ 0.29
PRKCH-206ENST00000553830 GSG1L2A8MUP6 293 aa16.86■□□□□ 0.29
PRKCH-206ENST00000553830 PATL2C9JE40 543 aaKnown RBP16.86■□□□□ 0.29
PRKCH-206ENST00000553830 FOXP2O15409 715 aa16.86■□□□□ 0.29
PRKCH-206ENST00000553830 PLCG2P16885 1265 aa16.86■□□□□ 0.29
PRKCH-206ENST00000553830 PPP4CP60510 307 aa16.86■□□□□ 0.29
PRKCH-206ENST00000553830 TBC1D10BQ4KMP7 808 aaPredicted RBP16.86■□□□□ 0.29
PRKCH-206ENST00000553830 APOBEC3HQ6NTF7 200 aaKnown RBP16.86■□□□□ 0.29
PRKCH-206ENST00000553830 CDC42EP5Q6NZY7 148 aa16.86■□□□□ 0.29
PRKCH-206ENST00000553830 SAMD7Q7Z3H4 446 aa16.86■□□□□ 0.29
PRKCH-206ENST00000553830 MAPKAPK5Q8IW41 473 aa16.86■□□□□ 0.29
PRKCH-206ENST00000553830 PRMT6Q96LA8 375 aaPredicted RBP16.86■□□□□ 0.29
PRKCH-206ENST00000553830 DSCC1Q9BVC3 393 aa16.86■□□□□ 0.29
PRKCH-206ENST00000553830 NAPBQ9H115 298 aa16.86■□□□□ 0.29
PRKCH-206ENST00000553830 TDRD3Q9H7E2 651 aaKnown RBP16.86■□□□□ 0.29
PRKCH-206ENST00000553830 EPB41L4AQ9HCS5 686 aaPredicted RBP16.86■□□□□ 0.29
PRKCH-206ENST00000553830 MYOZ2Q9NPC6 264 aa16.86■□□□□ 0.29
PRKCH-206ENST00000553830 U3KPZ7 1027 aaPredicted RBP16.86■□□□□ 0.29
PRKCH-206ENST00000553830 H7C1D1 291 aa16.85■□□□□ 0.29
PRKCH-206ENST00000553830 LMOD1P29536 600 aaPredicted RBP16.85■□□□□ 0.29
PRKCH-206ENST00000553830 RHBDL3P58872 404 aa16.85■□□□□ 0.29
PRKCH-206ENST00000553830 HAND2P61296 217 aa16.85■□□□□ 0.29
PRKCH-206ENST00000553830 DPY19L2Q6NUT2 758 aa16.85■□□□□ 0.29
PRKCH-206ENST00000553830 IFNL3Q8IZI9 196 aa16.85■□□□□ 0.29
PRKCH-206ENST00000553830 STK11IPQ8N1F8 1099 aa16.85■□□□□ 0.29
PRKCH-206ENST00000553830 MAP4K1Q92918 833 aa16.85■□□□□ 0.29
PRKCH-206ENST00000553830 NACAP1Q9BZK3 213 aa16.85■□□□□ 0.29
PRKCH-206ENST00000553830 SAP30BPQ9UHR5 308 aaKnown RBP16.85■□□□□ 0.29
PRKCH-206ENST00000553830 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
PRKCH-206ENST00000553830 EGFRP00533 1210 aa16.84■□□□□ 0.29
PRKCH-206ENST00000553830 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
PRKCH-206ENST00000553830 EPS15P42566 896 aa16.84■□□□□ 0.29
PRKCH-206ENST00000553830 KIF4BQ2VIQ3 1234 aa16.84■□□□□ 0.29
PRKCH-206ENST00000553830 DPF2Q92785 391 aa16.84■□□□□ 0.29
PRKCH-206ENST00000553830 DDRGK1Q96HY6 314 aa16.84■□□□□ 0.29
PRKCH-206ENST00000553830 MRIQ9BWK5 157 aa16.84■□□□□ 0.29
PRKCH-206ENST00000553830 VEZTQ9HBM0 779 aa16.84■□□□□ 0.29
PRKCH-206ENST00000553830 TSHZ2Q9NRE2 1034 aa16.84■□□□□ 0.29
PRKCH-206ENST00000553830 GPRC5DQ9NZD1 345 aa16.84■□□□□ 0.29
PRKCH-206ENST00000553830 CYP2D7A0A087X1C5 515 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 MINDY4BA8MYZ0 360 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 SLC27A2O14975 620 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 FGAP02671 866 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 POLR2AP24928 1970 aaKnown RBP16.83■□□□□ 0.28
PRKCH-206ENST00000553830 ZNF280AP59817 542 aaPredicted RBP16.83■□□□□ 0.28
PRKCH-206ENST00000553830 NBPF9Q3BBW0 867 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 CREB3L3Q68CJ9 461 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 CERS3Q8IU89 383 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 TRPM4Q8TD43 1214 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 TBC1D32Q96NH3 1257 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 DCP1AQ9NPI6 582 aaPredicted RBP16.83■□□□□ 0.28
PRKCH-206ENST00000553830 MCM9Q9NXL9 1143 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 TMOD2Q9NZR1 351 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 PALD1Q9ULE6 856 aa16.83■□□□□ 0.28
PRKCH-206ENST00000553830 MYH8P13535 1937 aa16.82■□□□□ 0.28
PRKCH-206ENST00000553830 DDX60LQ5H9U9 1706 aaKnown RBP16.82■□□□□ 0.28
PRKCH-206ENST00000553830 FLT1P17948 1338 aa16.82■□□□□ 0.28
PRKCH-206ENST00000553830 TCP10L2B9ZVM9 353 aa16.82■□□□□ 0.28
PRKCH-206ENST00000553830 CYP2D6P10635 497 aa16.82■□□□□ 0.28
PRKCH-206ENST00000553830 TCP10Q12799 353 aa16.82■□□□□ 0.28
PRKCH-206ENST00000553830 DDX4Q9NQI0 724 aaKnown RBP16.82■□□□□ 0.28
PRKCH-206ENST00000553830 ZNF70Q9UC06 446 aaPredicted RBP16.82■□□□□ 0.28
PRKCH-206ENST00000553830 CTNNA3Q9UI47 895 aa16.82■□□□□ 0.28
PRKCH-206ENST00000553830 ASTN2O75129 1339 aaPredicted RBP16.81■□□□□ 0.28
PRKCH-206ENST00000553830 MYO1BO43795 1136 aa16.81■□□□□ 0.28
PRKCH-206ENST00000553830 WDHD1O75717 1129 aaPredicted RBP16.81■□□□□ 0.28
PRKCH-206ENST00000553830 POLR3DP05423 398 aaPredicted RBP16.81■□□□□ 0.28
PRKCH-206ENST00000553830 HSPA4P34932 840 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms