RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 C11orf49Q9H6J7 331 aa6.73□□□□□ -1.33
CKAP4-203ENST00000553039 LEMD3Q9Y2U8 911 aa6.73□□□□□ -1.33
CKAP4-203ENST00000553039 COL1A1P02452 1464 aaPredicted RBP6.73□□□□□ -1.33
CKAP4-203ENST00000553039 INHAP05111 366 aa6.72□□□□□ -1.33
CKAP4-203ENST00000553039 U2AF1L5P0DN76 240 aaPredicted RBP6.72□□□□□ -1.33
CKAP4-203ENST00000553039 GTF2IP78347 998 aa6.72□□□□□ -1.33
CKAP4-203ENST00000553039 U2AF1Q01081 240 aaKnown RBP eCLIP6.72□□□□□ -1.33
CKAP4-203ENST00000553039 PRKCZQ05513 592 aa6.72□□□□□ -1.33
CKAP4-203ENST00000553039 IRF5Q13568 498 aa6.72□□□□□ -1.33
CKAP4-203ENST00000553039 ANKRD23Q86SG2 305 aa6.72□□□□□ -1.33
CKAP4-203ENST00000553039 PLBD2Q8NHP8 589 aa6.72□□□□□ -1.33
CKAP4-203ENST00000553039 CCDC97Q96F63 343 aaPredicted RBP6.72□□□□□ -1.33
CKAP4-203ENST00000553039 CDC5LQ99459 802 aaKnown RBP6.72□□□□□ -1.33
CKAP4-203ENST00000553039 REPIN1Q9BWE0 567 aaKnown RBP6.72□□□□□ -1.33
CKAP4-203ENST00000553039 PAK6Q9NQU5 681 aaPredicted RBP6.72□□□□□ -1.33
CKAP4-203ENST00000553039 SEC31BQ9NQW1 1179 aa6.72□□□□□ -1.33
CKAP4-203ENST00000553039 CLRN2A0PK11 232 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 SPDYE5A6NIY4 337 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 PDHXO00330 501 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 RAD21O60216 631 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 CLCN1P35523 988 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 TIE1P35590 1138 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 FLT3LGP49771 235 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 MDM2Q00987 491 aaPredicted RBP6.71□□□□□ -1.34
CKAP4-203ENST00000553039 PPATQ06203 517 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 VGLL4Q14135 290 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 CFAP100Q494V2 611 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 ZBTB38Q8NAP3 1195 aaPredicted RBP6.71□□□□□ -1.34
CKAP4-203ENST00000553039 COA7Q96BR5 231 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 PRMT6Q96LA8 375 aaPredicted RBP6.71□□□□□ -1.34
CKAP4-203ENST00000553039 ISCA1Q9BUE6 129 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 HMX1Q9NP08 348 aaPredicted RBP6.71□□□□□ -1.34
CKAP4-203ENST00000553039 BSDC1Q9NW68 430 aaPredicted RBP6.71□□□□□ -1.34
CKAP4-203ENST00000553039 PRKAG2Q9UGJ0 569 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 ADGRA2Q96PE1 1338 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 PIEZO1Q92508 2521 aa6.71□□□□□ -1.34
CKAP4-203ENST00000553039 ATP5J2-PTCD1G3V325 749 aa6.7□□□□□ -1.34
CKAP4-203ENST00000553039 PDE8AO60658 829 aa6.7□□□□□ -1.34
CKAP4-203ENST00000553039 CTGFP29279 349 aa6.7□□□□□ -1.34
CKAP4-203ENST00000553039 CCT4P50991 539 aaKnown RBP6.7□□□□□ -1.34
CKAP4-203ENST00000553039 MRPS5P82675 430 aaKnown RBP6.7□□□□□ -1.34
CKAP4-203ENST00000553039 PPIL2Q13356 520 aa6.7□□□□□ -1.34
CKAP4-203ENST00000553039 RTL5Q5HYW3 569 aaPredicted RBP6.7□□□□□ -1.34
CKAP4-203ENST00000553039 LRP10Q7Z4F1 713 aa6.7□□□□□ -1.34
CKAP4-203ENST00000553039 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.7□□□□□ -1.34
CKAP4-203ENST00000553039 MYLIPQ8WY64 445 aa6.7□□□□□ -1.34
CKAP4-203ENST00000553039 ASB2Q96Q27 587 aa6.7□□□□□ -1.34
CKAP4-203ENST00000553039 PARK7Q99497 189 aaKnown RBP6.7□□□□□ -1.34
CKAP4-203ENST00000553039 TMEM121BQ9BXQ6 578 aaPredicted RBP6.7□□□□□ -1.34
CKAP4-203ENST00000553039 ANKRD2Q9GZV1 360 aa6.7□□□□□ -1.34
CKAP4-203ENST00000553039 PLSCR2Q9NRY7 297 aa6.7□□□□□ -1.34
CKAP4-203ENST00000553039 MINPP1Q9UNW1 487 aa6.7□□□□□ -1.34
CKAP4-203ENST00000553039 KCNH4Q9UQ05 1017 aa6.7□□□□□ -1.34
CKAP4-203ENST00000553039 MED23Q9ULK4 1368 aa6.69□□□□□ -1.34
CKAP4-203ENST00000553039 KDM3BQ7LBC6 1761 aa6.69□□□□□ -1.34
CKAP4-203ENST00000553039 TNPO2O14787 897 aaKnown RBP6.69□□□□□ -1.34
CKAP4-203ENST00000553039 ELNP15502 786 aa6.69□□□□□ -1.34
CKAP4-203ENST00000553039 FKBP1AP62942 108 aaKnown RBP6.69□□□□□ -1.34
CKAP4-203ENST00000553039 SMAD3P84022 425 aaKnown RBP6.69□□□□□ -1.34
CKAP4-203ENST00000553039 CC2D1BQ5T0F9 858 aaKnown RBP6.69□□□□□ -1.34
CKAP4-203ENST00000553039 ALYREFQ86V81 257 aaKnown RBP6.69□□□□□ -1.34
CKAP4-203ENST00000553039 BANK1Q8NDB2 785 aa6.69□□□□□ -1.34
CKAP4-203ENST00000553039 DIS3LQ8TF46 1054 aaKnown RBP6.69□□□□□ -1.34
CKAP4-203ENST00000553039 PHF12Q96QT6 1004 aa6.69□□□□□ -1.34
CKAP4-203ENST00000553039 UHRF1Q96T88 793 aaPredicted RBP6.69□□□□□ -1.34
CKAP4-203ENST00000553039 P2RX7Q99572 595 aaKnown RBP6.69□□□□□ -1.34
CKAP4-203ENST00000553039 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.69□□□□□ -1.34
CKAP4-203ENST00000553039 PNNQ9H307 717 aaKnown RBP6.69□□□□□ -1.34
CKAP4-203ENST00000553039 GPCPD1Q9NPB8 672 aa6.69□□□□□ -1.34
CKAP4-203ENST00000553039 BABAM1Q9NWV8 329 aa6.69□□□□□ -1.34
CKAP4-203ENST00000553039 ZNF70Q9UC06 446 aaPredicted RBP6.69□□□□□ -1.34
CKAP4-203ENST00000553039 GABRQQ9UN88 632 aa6.69□□□□□ -1.34
CKAP4-203ENST00000553039 TRPC6Q9Y210 931 aa6.69□□□□□ -1.34
CKAP4-203ENST00000553039 BRCA2P51587 3418 aa6.69□□□□□ -1.34
CKAP4-203ENST00000553039 F8W031 263 aaPredicted RBP6.68□□□□□ -1.34
CKAP4-203ENST00000553039 ANXA1P04083 346 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 BCRP11274 1271 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 KCNJ4P48050 445 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 PROSER3Q2NL68 480 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 DCAF15Q66K64 600 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 FASTKD5Q7L8L6 764 aaKnown RBP6.68□□□□□ -1.34
CKAP4-203ENST00000553039 ADAMTS19Q8TE59 1207 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 ZNF428Q96B54 188 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 POM121Q96HA1 1249 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.68□□□□□ -1.34
CKAP4-203ENST00000553039 CD209Q9NNX6 404 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 TSPYL4Q9UJ04 414 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 OGDHLQ9ULD0 1010 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 NUP98P52948 1817 aa6.68□□□□□ -1.34
CKAP4-203ENST00000553039 DUOX1Q9NRD9 1551 aa6.67□□□□□ -1.34
CKAP4-203ENST00000553039 C2orf72A6NCS6 295 aa6.67□□□□□ -1.34
CKAP4-203ENST00000553039 CXCL11O14625 94 aa6.67□□□□□ -1.34
CKAP4-203ENST00000553039 HMGCRP04035 888 aa6.67□□□□□ -1.34
CKAP4-203ENST00000553039 IGHMBP2P38935 993 aaKnown RBP6.67□□□□□ -1.34
CKAP4-203ENST00000553039 TMEM31Q5JXX7 168 aa6.67□□□□□ -1.34
CKAP4-203ENST00000553039 RIC3Q7Z5B4 369 aa6.67□□□□□ -1.34
CKAP4-203ENST00000553039 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.67□□□□□ -1.34
CKAP4-203ENST00000553039 RGS22Q8NE09 1264 aa6.67□□□□□ -1.34
CKAP4-203ENST00000553039 HYPKQ9NX55 129 aa6.67□□□□□ -1.34
CKAP4-203ENST00000553039 COG6Q9Y2V7 657 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms