RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 PDE6AP16499 860 aa25.93■■□□□ 1.74
NEK3-202ENST00000550841 COL13A1Q5TAT6 717 aaPredicted RBP25.93■■□□□ 1.74
NEK3-202ENST00000550841 CERS3Q8IU89 383 aa25.93■■□□□ 1.74
NEK3-202ENST00000550841 ZNF384Q8TF68 577 aa25.93■■□□□ 1.74
NEK3-202ENST00000550841 FSD1Q9BTV5 496 aa25.93■■□□□ 1.74
NEK3-202ENST00000550841 PLCG2P16885 1265 aa25.92■■□□□ 1.74
NEK3-202ENST00000550841 UBE3CQ15386 1083 aa25.92■■□□□ 1.74
NEK3-202ENST00000550841 TTC22Q5TAA0 569 aa25.92■■□□□ 1.74
NEK3-202ENST00000550841 RILPL2Q969X0 211 aa25.92■■□□□ 1.74
NEK3-202ENST00000550841 TDRD3Q9H7E2 651 aaKnown RBP25.92■■□□□ 1.74
NEK3-202ENST00000550841 CREBZFQ9NS37 354 aa25.92■■□□□ 1.74
NEK3-202ENST00000550841 ZNF70Q9UC06 446 aaPredicted RBP25.92■■□□□ 1.74
NEK3-202ENST00000550841 PCDHAC2Q9Y5I4 1007 aa25.92■■□□□ 1.74
NEK3-202ENST00000550841 MYO5AQ9Y4I1 1855 aaKnown RBP25.91■■□□□ 1.74
NEK3-202ENST00000550841 DOCK2Q92608 1830 aa25.91■■□□□ 1.74
NEK3-202ENST00000550841 ADD2P35612 726 aa25.91■■□□□ 1.74
NEK3-202ENST00000550841 BTDP43251 543 aa25.91■■□□□ 1.74
NEK3-202ENST00000550841 PPP4CP60510 307 aa25.91■■□□□ 1.74
NEK3-202ENST00000550841 SPDYE2Q495Y8 402 aa25.91■■□□□ 1.74
NEK3-202ENST00000550841 ANGEL2Q5VTE6 544 aaKnown RBP25.91■■□□□ 1.74
NEK3-202ENST00000550841 CDC37L1Q7L3B6 337 aa25.91■■□□□ 1.74
NEK3-202ENST00000550841 APOBEC3FQ8IUX4 373 aaKnown RBP25.91■■□□□ 1.74
NEK3-202ENST00000550841 USP40Q9NVE5 1235 aa25.91■■□□□ 1.74
NEK3-202ENST00000550841 GGA3Q9NZ52 723 aa25.91■■□□□ 1.74
NEK3-202ENST00000550841 ZNF532Q9HCE3 1301 aa25.9■■□□□ 1.74
NEK3-202ENST00000550841 RNF113AO15541 343 aaKnown RBP25.9■■□□□ 1.74
NEK3-202ENST00000550841 SULF1Q8IWU6 871 aa25.9■■□□□ 1.74
NEK3-202ENST00000550841 TNFAIP1Q13829 316 aa25.89■■□□□ 1.74
NEK3-202ENST00000550841 FKBP1CQ5VVH2 108 aa25.89■■□□□ 1.74
NEK3-202ENST00000550841 CDC42EP5Q6NZY7 148 aa25.89■■□□□ 1.74
NEK3-202ENST00000550841 MAST2Q6P0Q8 1798 aa25.88■■□□□ 1.73
NEK3-202ENST00000550841 CLRN2A0PK11 232 aa25.88■■□□□ 1.73
NEK3-202ENST00000550841 HSPA1AP0DMV8 641 aaKnown RBP25.88■■□□□ 1.73
NEK3-202ENST00000550841 HSPA1BP0DMV9 641 aaKnown RBP25.88■■□□□ 1.73
NEK3-202ENST00000550841 TNNI2P48788 182 aa25.88■■□□□ 1.73
NEK3-202ENST00000550841 MAP1SQ66K74 1059 aaPredicted RBP25.88■■□□□ 1.73
NEK3-202ENST00000550841 VEZTQ9HBM0 779 aa25.88■■□□□ 1.73
NEK3-202ENST00000550841 TCRBV5S4A2TA0A5A2 114 aa25.87■■□□□ 1.73
NEK3-202ENST00000550841 RGS3P49796 1198 aa25.87■■□□□ 1.73
NEK3-202ENST00000550841 KRT26Q7Z3Y9 468 aa25.87■■□□□ 1.73
NEK3-202ENST00000550841 AATFQ9NY61 560 aaKnown RBP eCLIP25.87■■□□□ 1.73
NEK3-202ENST00000550841 ADAMTSL1Q8N6G6 1762 aa25.87■■□□□ 1.73
NEK3-202ENST00000550841 ASTN2O75129 1339 aaPredicted RBP25.87■■□□□ 1.73
NEK3-202ENST00000550841 MAGEB6P1A0A0J9YX57 407 aa25.86■■□□□ 1.73
NEK3-202ENST00000550841 MKRN1Q9UHC7 482 aaKnown RBP25.86■■□□□ 1.73
NEK3-202ENST00000550841 HIP1O00291 1037 aa25.85■■□□□ 1.73
NEK3-202ENST00000550841 ADGRA1Q86SQ6 560 aa25.85■■□□□ 1.73
NEK3-202ENST00000550841 USP48Q86UV5 1035 aa25.85■■□□□ 1.73
NEK3-202ENST00000550841 APPBP2Q92624 585 aa25.85■■□□□ 1.73
NEK3-202ENST00000550841 PPP2R3BQ9Y5P8 575 aa25.85■■□□□ 1.73
NEK3-202ENST00000550841 ECM29Q5VYK3 1845 aa25.85■■□□□ 1.73
NEK3-202ENST00000550841 POLR2AP24928 1970 aaKnown RBP25.85■■□□□ 1.73
NEK3-202ENST00000550841 MYH7P12883 1935 aa25.84■■□□□ 1.73
NEK3-202ENST00000550841 RFX7Q2KHR2 1363 aa25.84■■□□□ 1.73
NEK3-202ENST00000550841 RHBDL3P58872 404 aa25.84■■□□□ 1.73
NEK3-202ENST00000550841 TNS4Q8IZW8 715 aa25.84■■□□□ 1.73
NEK3-202ENST00000550841 MIGA1Q8NAN2 632 aa25.84■■□□□ 1.73
NEK3-202ENST00000550841 IDI2Q9BXS1 227 aa25.84■■□□□ 1.73
NEK3-202ENST00000550841 GTF3C3Q9Y5Q9 886 aa25.84■■□□□ 1.73
NEK3-202ENST00000550841 TCP10L2B9ZVM9 353 aa25.83■■□□□ 1.73
NEK3-202ENST00000550841 GSPT1P15170 499 aaKnown RBP25.83■■□□□ 1.73
NEK3-202ENST00000550841 SDSP20132 328 aa25.83■■□□□ 1.73
NEK3-202ENST00000550841 FAM83AQ86UY5 434 aa25.83■■□□□ 1.73
NEK3-202ENST00000550841 TEX11Q8IYF3 940 aa25.83■■□□□ 1.73
NEK3-202ENST00000550841 DEFB129Q9H1M3 183 aa25.83■■□□□ 1.73
NEK3-202ENST00000550841 NPM3O75607 178 aaKnown RBP25.82■■□□□ 1.72
NEK3-202ENST00000550841 SH3RF3Q8TEJ3 882 aaPredicted RBP25.82■■□□□ 1.72
NEK3-202ENST00000550841 AIDAQ96BJ3 306 aa25.82■■□□□ 1.72
NEK3-202ENST00000550841 GLIS2Q9BZE0 524 aaPredicted RBP25.82■■□□□ 1.72
NEK3-202ENST00000550841 PASKQ96RG2 1323 aa25.82■■□□□ 1.72
NEK3-202ENST00000550841 ITGBL1O95965 494 aaPredicted RBP25.81■■□□□ 1.72
NEK3-202ENST00000550841 DYNLL1P63167 89 aaKnown RBP25.81■■□□□ 1.72
NEK3-202ENST00000550841 ZMYM1Q5SVZ6 1142 aa25.81■■□□□ 1.72
NEK3-202ENST00000550841 RIOK1Q9BRS2 568 aaKnown RBP25.81■■□□□ 1.72
NEK3-202ENST00000550841 CRNKL1Q9BZJ0 848 aaKnown RBP25.81■■□□□ 1.72
NEK3-202ENST00000550841 TMEM88BA6NKF7 163 aa25.8■■□□□ 1.72
NEK3-202ENST00000550841 ENTPD3O75355 529 aa25.8■■□□□ 1.72
NEK3-202ENST00000550841 CACNB3P54284 484 aa25.8■■□□□ 1.72
NEK3-202ENST00000550841 RASA3Q14644 834 aa25.8■■□□□ 1.72
NEK3-202ENST00000550841 BMP2KLQ5H9B9 411 aa25.8■■□□□ 1.72
NEK3-202ENST00000550841 SKAP1Q86WV1 359 aa25.8■■□□□ 1.72
NEK3-202ENST00000550841 FAM151AQ8WW52 585 aa25.8■■□□□ 1.72
NEK3-202ENST00000550841 HELLSQ9NRZ9 838 aa25.8■■□□□ 1.72
NEK3-202ENST00000550841 WDHD1O75717 1129 aaPredicted RBP25.79■■□□□ 1.72
NEK3-202ENST00000550841 SLFNL1Q499Z3 407 aa25.79■■□□□ 1.72
NEK3-202ENST00000550841 OSBP2Q969R2 916 aa25.79■■□□□ 1.72
NEK3-202ENST00000550841 PUS7LQ9H0K6 701 aaKnown RBP25.79■■□□□ 1.72
NEK3-202ENST00000550841 DIAPH3Q9NSV4 1193 aa25.79■■□□□ 1.72
NEK3-202ENST00000550841 ADM5C9JUS6 153 aa25.78■■□□□ 1.72
NEK3-202ENST00000550841 MBD4O95243 580 aa25.78■■□□□ 1.72
NEK3-202ENST00000550841 USP5P45974 858 aa25.78■■□□□ 1.72
NEK3-202ENST00000550841 SUPT20HL1Q3ZLR7 823 aa25.78■■□□□ 1.72
NEK3-202ENST00000550841 TGFBRAP1Q8WUH2 860 aa25.78■■□□□ 1.72
NEK3-202ENST00000550841 AK9Q5TCS8 1911 aa25.78■■□□□ 1.72
NEK3-202ENST00000550841 CHGBP05060 677 aa25.77■■□□□ 1.72
NEK3-202ENST00000550841 GNAT2P19087 354 aa25.77■■□□□ 1.72
NEK3-202ENST00000550841 NF2P35240 595 aa25.77■■□□□ 1.72
NEK3-202ENST00000550841 NFIAQ12857 509 aa25.77■■□□□ 1.72
NEK3-202ENST00000550841 HOOK2Q96ED9 719 aa25.77■■□□□ 1.72
NEK3-202ENST00000550841 ARMT1Q9H993 441 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms