RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PLD4Q96BZ4 506 aa8.62□□□□□ -1.03
TGFBR1-208ENST00000550253 PNMA5Q96PV4 448 aa8.62□□□□□ -1.03
TGFBR1-208ENST00000550253 DNAJC7Q99615 494 aa8.62□□□□□ -1.03
TGFBR1-208ENST00000550253 PCDHB5Q9Y5E4 795 aa8.62□□□□□ -1.03
TGFBR1-208ENST00000550253 CDK13Q14004 1512 aaKnown RBP8.62□□□□□ -1.03
TGFBR1-208ENST00000550253 STRCQ7RTU9 1775 aa8.62□□□□□ -1.03
TGFBR1-208ENST00000550253 DCDC2BA2VCK2 349 aa8.61□□□□□ -1.03
TGFBR1-208ENST00000550253 FAM221AA4D161 298 aa8.61□□□□□ -1.03
TGFBR1-208ENST00000550253 KHNYNO15037 678 aaKnown RBP8.61□□□□□ -1.03
TGFBR1-208ENST00000550253 TLR3O15455 904 aaKnown RBP8.61□□□□□ -1.03
TGFBR1-208ENST00000550253 SCARF1Q14162 830 aa8.61□□□□□ -1.03
TGFBR1-208ENST00000550253 TRPM4Q8TD43 1214 aa8.61□□□□□ -1.03
TGFBR1-208ENST00000550253 PCDH12Q9NPG4 1184 aa8.61□□□□□ -1.03
TGFBR1-208ENST00000550253 FANCLQ9NW38 375 aa8.61□□□□□ -1.03
TGFBR1-208ENST00000550253 MAPTP10636 758 aaKnown RBP8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 ANAPC15P60006 121 aa8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 MPP2Q14168 576 aa8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 DDR2Q16832 855 aa8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 RASIP1Q5U651 963 aa8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 KANK3Q6NY19 840 aa8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 DHX32Q7L7V1 743 aaKnown RBP8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 SPC25Q9HBM1 224 aa8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 DNMT3LQ9UJW3 386 aa8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 LRRIQ1Q96JM4 1722 aa8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 PREX1Q8TCU6 1659 aa8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 EFCAB5A4FU69 1503 aa8.6□□□□□ -1.03
TGFBR1-208ENST00000550253 DNAJC6O75061 913 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 CDC45O75419 566 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 BMP6P22004 513 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 SPEM2Q0P670 501 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 NSUN5Q96P11 429 aaKnown RBP8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 SLC30A3Q99726 388 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 TMEM39AQ9NV64 488 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 PRKAB1Q9Y478 270 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 ARHGEF12Q9NZN5 1544 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 KIF14Q15058 1648 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 PDE2AO00408 941 aaPredicted RBP8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 CILPO75339 1184 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 BMP1P13497 986 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 NRLP54845 237 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 TRIM46Q7Z4K8 759 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 REXO1Q8N1G1 1221 aaKnown RBP8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 MIR1-1HGQ9H1L0 117 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 METTL14Q9HCE5 456 aaKnown RBP8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 ST7Q9NRC1 585 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 NDFIP2Q9NV92 336 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 ACTR10Q9NZ32 417 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 MARK1Q9P0L2 795 aa8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 GPN3Q9UHW5 284 aaPredicted RBP8.59□□□□□ -1.03
TGFBR1-208ENST00000550253 POGZQ7Z3K3 1410 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 ESYT3A0FGR9 886 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 PDPK1O15530 556 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 MCM4P33991 863 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 ZNF165P49910 485 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 RASGRF1Q13972 1273 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 CWF19L2Q2TBE0 894 aaKnown RBP8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 KIAA0907Q7Z7F0 614 aaPredicted RBP8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 OR6P1Q8NGX9 317 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 ASAP3Q8TDY4 903 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 APPBP2Q92624 585 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 JARID2Q92833 1246 aaPredicted RBP8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 FERD3LQ96RJ6 166 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 MUC3BQ9H195 1237 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 ZNRF3Q9ULT6 936 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 MYO5CQ9NQX4 1742 aa8.58□□□□□ -1.04
TGFBR1-208ENST00000550253 ZBTB42B2RXF5 422 aa8.57□□□□□ -1.04
TGFBR1-208ENST00000550253 BNIP3LO60238 219 aa8.57□□□□□ -1.04
TGFBR1-208ENST00000550253 MLECQ14165 292 aa8.57□□□□□ -1.04
TGFBR1-208ENST00000550253 RBBP8NLQ8NC74 664 aaPredicted RBP8.57□□□□□ -1.04
TGFBR1-208ENST00000550253 BHMTQ93088 406 aa8.57□□□□□ -1.04
TGFBR1-208ENST00000550253 CRBNQ96SW2 442 aa8.57□□□□□ -1.04
TGFBR1-208ENST00000550253 PBX4Q9BYU1 374 aa8.57□□□□□ -1.04
TGFBR1-208ENST00000550253 TNKS2Q9H2K2 1166 aa8.57□□□□□ -1.04
TGFBR1-208ENST00000550253 RASSF4Q9H2L5 321 aa8.57□□□□□ -1.04
TGFBR1-208ENST00000550253 BRMS1Q9HCU9 246 aa8.57□□□□□ -1.04
TGFBR1-208ENST00000550253 TMEM260Q9NX78 707 aa8.57□□□□□ -1.04
TGFBR1-208ENST00000550253 MAGI2Q86UL8 1455 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 LOC102724428A0A0B4J2F2 783 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 PLEKHD1A6NEE1 506 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 ZNF157P51786 506 aaPredicted RBP8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 SIK1P57059 783 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 FBXW10Q5XX13 1052 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 REC114Q7Z4M0 266 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 RAB44Q7Z6P3 723 aaPredicted RBP8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 HOMER1Q86YM7 354 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 RPUSD2Q8IZ73 545 aaKnown RBP8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 ZFP42Q96MM3 310 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 CYP8B1Q9UNU6 501 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 MAPK8IP1Q9UQF2 711 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 PLCH2O75038 1416 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 SCAPERQ9BY12 1400 aa8.56□□□□□ -1.04
TGFBR1-208ENST00000550253 PPP1R12AO14974 1030 aaPredicted RBP8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 AVPP01185 164 aa8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 CASP7P55210 303 aa8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 ATP11AP98196 1134 aa8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 CLCQ05315 142 aa8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 IFRD2Q12894 506 aaPredicted RBP8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 SQSTM1Q13501 440 aa8.55□□□□□ -1.04
TGFBR1-208ENST00000550253 SEPT6Q14141 434 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms