RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 AKAP17AQ02040 695 aaKnown RBP15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 NR5A1Q13285 461 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 TRMT44Q8IYL2 757 aaKnown RBP15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 CNNM3Q8NE01 707 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 UBAC1Q9BSL1 405 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 GPR108Q9NPR9 543 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 TPM3P06753 285 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 LCORLQ8N3X6 602 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 PRIMPOLQ96LW4 560 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 PDE8AO60658 829 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 PDIA4P13667 645 aaKnown RBP15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 KIF23Q02241 960 aaPredicted RBP15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 IQCB1Q15051 598 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 SAFBQ15424 915 aaKnown RBP eCLIP15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 CEP135Q66GS9 1140 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 KCNG4Q8TDN1 519 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 KIAA1468Q9P260 1216 aa15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 ZHX1Q9UKY1 873 aaPredicted RBP15.81■□□□□ 0.12
PRPF40B-209ENST00000548825 LMO7Q8WWI1 1683 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 CTAGE5O15320 804 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 AFMP43652 599 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 TPM4P67936 248 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 ADALQ6DHV7 355 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 LRRC8AQ8IWT6 810 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 IFNL3Q8IZI9 196 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 SLIT3O75094 1523 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 SSRP1Q08945 709 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 CCAR2Q8N163 923 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 C5P01031 1676 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 CAMTA1Q9Y6Y1 1673 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 UBN2Q6ZU65 1347 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 OVOS2A0A0G2JMS6 1433 aa15.8■□□□□ 0.12
PRPF40B-209ENST00000548825 CYP19A1P11511 503 aaPredicted RBP15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 CASP1P29466 404 aa15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 PUM3Q15397 648 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 DHX40Q8IX18 779 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 ZNF710Q8N1W2 664 aa15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 CPLX3Q8WVH0 158 aa15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 KCNQ2O43526 872 aa15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 STX17P56962 302 aa15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 PLA2G4DQ86XP0 818 aa15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 FMR1NBQ8N0W7 255 aaPredicted RBP15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 TEX13AQ9BXU3 409 aaPredicted RBP15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 ALDH8A1Q9H2A2 487 aaPredicted RBP15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 SFPQP23246 707 aaKnown RBP eCLIP15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 GRIN1Q05586 938 aa15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 WTAPQ15007 396 aa15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 NBPF3Q9H094 633 aa15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 TFCP2L1Q9NZI6 479 aa15.79■□□□□ 0.12
PRPF40B-209ENST00000548825 PES1O00541 588 aaKnown RBP15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 TTF1Q15361 905 aaPredicted RBP15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 TRIM22Q8IYM9 498 aa15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 CABP5Q9NP86 173 aa15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 RTEL1Q9NZ71 1219 aa15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 MROH7-TTC4A0A0A0MT08 1334 aa15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 SART3Q15020 963 aaKnown RBP15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 DIS3L2Q8IYB7 885 aaKnown RBP15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 NACAP1Q9BZK3 213 aa15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 DYNLL1P63167 89 aaKnown RBP15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 LPIN2Q92539 896 aa15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 STRBPQ96SI9 672 aaKnown RBP15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 VPS54Q9P1Q0 977 aa15.78■□□□□ 0.12
PRPF40B-209ENST00000548825 DDB1Q16531 1140 aa15.77■□□□□ 0.12
PRPF40B-209ENST00000548825 RTN1Q16799 776 aa15.77■□□□□ 0.12
PRPF40B-209ENST00000548825 ENGASEQ8NFI3 743 aa15.77■□□□□ 0.12
PRPF40B-209ENST00000548825 UTP14AQ9BVJ6 771 aaKnown RBP15.77■□□□□ 0.12
PRPF40B-209ENST00000548825 EPB41L4AQ9HCS5 686 aaPredicted RBP15.77■□□□□ 0.12
PRPF40B-209ENST00000548825 TUBGCP6Q96RT7 1819 aa15.77■□□□□ 0.12
PRPF40B-209ENST00000548825 POLR2DO15514 142 aaKnown RBP15.77■□□□□ 0.11
PRPF40B-209ENST00000548825 CDKL5O76039 1030 aa15.77■□□□□ 0.11
PRPF40B-209ENST00000548825 CRKLP46109 303 aaKnown RBP15.77■□□□□ 0.11
PRPF40B-209ENST00000548825 OLFM4Q6UX06 510 aa15.77■□□□□ 0.11
PRPF40B-209ENST00000548825 FAM205CA6NFA0 338 aa15.76■□□□□ 0.11
PRPF40B-209ENST00000548825 UBASH3AP57075 661 aa15.76■□□□□ 0.11
PRPF40B-209ENST00000548825 SYT10Q6XYQ8 523 aa15.76■□□□□ 0.11
PRPF40B-209ENST00000548825 RASSF8Q8NHQ8 419 aa15.76■□□□□ 0.11
PRPF40B-209ENST00000548825 SH2B2O14492 632 aaPredicted RBP15.76■□□□□ 0.11
PRPF40B-209ENST00000548825 EVX2Q03828 476 aa15.76■□□□□ 0.11
PRPF40B-209ENST00000548825 LONRF3Q496Y0 759 aa15.76■□□□□ 0.11
PRPF40B-209ENST00000548825 OXER1Q8TDS5 423 aa15.76■□□□□ 0.11
PRPF40B-209ENST00000548825 SPTLC3Q9NUV7 552 aa15.76■□□□□ 0.11
PRPF40B-209ENST00000548825 CSF1RP07333 972 aa15.76■□□□□ 0.11
PRPF40B-209ENST00000548825 FAM47AQ5JRC9 791 aa15.75■□□□□ 0.11
PRPF40B-209ENST00000548825 DHX58Q96C10 678 aa15.75■□□□□ 0.11
PRPF40B-209ENST00000548825 AFDNP55196 1824 aaKnown RBP15.75■□□□□ 0.11
PRPF40B-209ENST00000548825 NRDCO43847 1150 aa15.75■□□□□ 0.11
PRPF40B-209ENST00000548825 CHRNDQ07001 517 aa15.75■□□□□ 0.11
PRPF40B-209ENST00000548825 USP49Q70CQ1 688 aa15.75■□□□□ 0.11
PRPF40B-209ENST00000548825 UQCRFS1P1P0C7P4 283 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 JMYQ8N9B5 988 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 DPF2Q92785 391 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 FANCLQ9NW38 375 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 KCNH3Q9ULD8 1083 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 AKNAD1Q5T1N1 836 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 SHC4Q6S5L8 630 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 BRAPQ7Z569 592 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 ZNF215Q9UL58 517 aaPredicted RBP15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 PCDHA5Q9Y5H7 936 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 ZMYM6O95789 1325 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 TMEM232C9JQI7 657 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms