RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PI4KAP1Q8N8J0 262 aa24.5■■□□□ 1.51
CTDSP2-204ENST00000548823 GJA8P48165 433 aa24.49■■□□□ 1.51
CTDSP2-204ENST00000548823 RBM5P52756 815 aaKnown RBP eCLIP24.49■■□□□ 1.51
CTDSP2-204ENST00000548823 MAP3K9P80192 1104 aa24.49■■□□□ 1.51
CTDSP2-204ENST00000548823 VGLL4Q14135 290 aa24.49■■□□□ 1.51
CTDSP2-204ENST00000548823 ANKRD45Q5TZF3 282 aa24.49■■□□□ 1.51
CTDSP2-204ENST00000548823 C15orf52Q6ZUT6 534 aaKnown RBP24.49■■□□□ 1.51
CTDSP2-204ENST00000548823 USP44Q9H0E7 712 aa24.49■■□□□ 1.51
CTDSP2-204ENST00000548823 IRS2Q9Y4H2 1338 aa24.48■■□□□ 1.51
CTDSP2-204ENST00000548823 IL1R1P14778 569 aa24.48■■□□□ 1.51
CTDSP2-204ENST00000548823 ITGA6P23229 1130 aa24.48■■□□□ 1.51
CTDSP2-204ENST00000548823 CHRNDQ07001 517 aa24.48■■□□□ 1.51
CTDSP2-204ENST00000548823 CSADQ9Y600 493 aa24.48■■□□□ 1.51
CTDSP2-204ENST00000548823 GJB1P08034 283 aa24.47■■□□□ 1.51
CTDSP2-204ENST00000548823 ATP8B2P98198 1209 aa24.47■■□□□ 1.51
CTDSP2-204ENST00000548823 TEPSINQ96N21 525 aa24.47■■□□□ 1.51
CTDSP2-204ENST00000548823 CETPP11597 493 aa24.46■■□□□ 1.51
CTDSP2-204ENST00000548823 SPDYE2Q495Y8 402 aa24.46■■□□□ 1.51
CTDSP2-204ENST00000548823 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.46■■□□□ 1.512e-7■□□□□ 10.1
CTDSP2-204ENST00000548823 LNPKQ9C0E8 428 aa24.46■■□□□ 1.51
CTDSP2-204ENST00000548823 ZNF70Q9UC06 446 aaPredicted RBP24.46■■□□□ 1.51
CTDSP2-204ENST00000548823 HDAC5Q9UQL6 1122 aa24.46■■□□□ 1.51
CTDSP2-204ENST00000548823 SOX1O00570 391 aaPredicted RBP24.45■■□□□ 1.5
CTDSP2-204ENST00000548823 UBTFL1P0CB47 393 aaPredicted RBP24.45■■□□□ 1.5
CTDSP2-204ENST00000548823 NEXNQ0ZGT2 675 aa24.45■■□□□ 1.5
CTDSP2-204ENST00000548823 ZNF804AQ7Z570 1209 aa24.45■■□□□ 1.5
CTDSP2-204ENST00000548823 SRRDQ9UH36 339 aa24.45■■□□□ 1.5
CTDSP2-204ENST00000548823 SPDYE5A6NIY4 337 aa24.44■■□□□ 1.5
CTDSP2-204ENST00000548823 BTBD19C9JJ37 291 aa24.44■■□□□ 1.5
CTDSP2-204ENST00000548823 H7C1W4 665 aa24.44■■□□□ 1.5
CTDSP2-204ENST00000548823 GRK4P32298 578 aa24.44■■□□□ 1.5
CTDSP2-204ENST00000548823 UBE3BQ7Z3V4 1068 aa24.44■■□□□ 1.5
CTDSP2-204ENST00000548823 HELBQ8NG08 1087 aaPredicted RBP24.44■■□□□ 1.5
CTDSP2-204ENST00000548823 PLA2G12BQ9BX93 195 aa24.44■■□□□ 1.5
CTDSP2-204ENST00000548823 SNAP23O00161 211 aa24.43■■□□□ 1.5
CTDSP2-204ENST00000548823 HOXD10P28358 340 aa24.43■■□□□ 1.5
CTDSP2-204ENST00000548823 LRCH3Q96II8 777 aa24.43■■□□□ 1.5
CTDSP2-204ENST00000548823 NEURL1BA8MQ27 555 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 CCL5P13501 91 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 CWF19L2Q2TBE0 894 aaKnown RBP24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 C17orf99Q6UX52 265 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 CDAN1Q8IWY9 1227 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 LINS1Q8NG48 757 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 RAET1EQ8TD07 263 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 TDRD3Q9H7E2 651 aaKnown RBP24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 RIPOR2Q9Y4F9 1068 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 CSF1RP07333 972 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 PSMC4P43686 418 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 BMP2KLQ5H9B9 411 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 TRIM47Q96LD4 638 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 RNF208Q9H0X6 261 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 ZBTB47Q9UFB7 747 aaPredicted RBP24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 SERPINA10Q9UK55 444 aa24.42■■□□□ 1.5
CTDSP2-204ENST00000548823 LAMA3Q16787 3333 aa24.41■■□□□ 1.5
CTDSP2-204ENST00000548823 TAF5LO75529 589 aa24.41■■□□□ 1.5
CTDSP2-204ENST00000548823 CTGFP29279 349 aa24.41■■□□□ 1.5
CTDSP2-204ENST00000548823 TNNI2P48788 182 aa24.41■■□□□ 1.5
CTDSP2-204ENST00000548823 SNAPC2Q13487 334 aa24.41■■□□□ 1.5
CTDSP2-204ENST00000548823 ERO1BQ86YB8 467 aa24.41■■□□□ 1.5
CTDSP2-204ENST00000548823 IPO9Q96P70 1041 aaKnown RBP24.41■■□□□ 1.5
CTDSP2-204ENST00000548823 TMEM39BQ9GZU3 492 aa24.41■■□□□ 1.5
CTDSP2-204ENST00000548823 JAG2Q9Y219 1238 aa24.41■■□□□ 1.5
CTDSP2-204ENST00000548823 ARAP2Q8WZ64 1704 aa24.4■■□□□ 1.5
CTDSP2-204ENST00000548823 FARP2O94887 1054 aaPredicted RBP24.4■■□□□ 1.5
CTDSP2-204ENST00000548823 OSBPP22059 807 aa24.4■■□□□ 1.5
CTDSP2-204ENST00000548823 SSH3Q8TE77 659 aa24.4■■□□□ 1.5
CTDSP2-204ENST00000548823 LRRFIP2Q9Y608 721 aaKnown RBP24.4■■□□□ 1.5
CTDSP2-204ENST00000548823 UTYO14607 1347 aa24.4■■□□□ 1.5
CTDSP2-204ENST00000548823 TCP10L2B9ZVM9 353 aa24.39■■□□□ 1.49
CTDSP2-204ENST00000548823 ECM2O94769 699 aaPredicted RBP24.39■■□□□ 1.49
CTDSP2-204ENST00000548823 UBXN2AP68543 259 aa24.39■■□□□ 1.49
CTDSP2-204ENST00000548823 SNCAIPQ9Y6H5 919 aa24.39■■□□□ 1.49
CTDSP2-204ENST00000548823 IRF6O14896 467 aa24.38■■□□□ 1.49
CTDSP2-204ENST00000548823 EVI5O60447 810 aa24.38■■□□□ 1.49
CTDSP2-204ENST00000548823 GPR153Q6NV75 609 aa24.38■■□□□ 1.49
CTDSP2-204ENST00000548823 U2AF1L4Q8WU68 220 aaKnown RBP24.38■■□□□ 1.49
CTDSP2-204ENST00000548823 BIN2Q9UBW5 565 aaPredicted RBP24.38■■□□□ 1.49
CTDSP2-204ENST00000548823 TTF2Q9UNY4 1162 aaKnown RBP24.38■■□□□ 1.49
CTDSP2-204ENST00000548823 FAM205AQ6ZU69 1335 aa24.38■■□□□ 1.49
CTDSP2-204ENST00000548823 ANKRD18BA2A2Z9 1011 aa24.37■■□□□ 1.49
CTDSP2-204ENST00000548823 FMNL1O95466 1100 aaPredicted RBP24.37■■□□□ 1.49
CTDSP2-204ENST00000548823 MTX1Q13505 466 aa24.37■■□□□ 1.49
CTDSP2-204ENST00000548823 POLA2Q14181 598 aa24.37■■□□□ 1.49
CTDSP2-204ENST00000548823 CPA4Q9UI42 421 aa24.37■■□□□ 1.49
CTDSP2-204ENST00000548823 A0A1B0GUL6 1792 aa24.36■■□□□ 1.49
CTDSP2-204ENST00000548823 PPIL2Q13356 520 aa24.36■■□□□ 1.49
CTDSP2-204ENST00000548823 MFSD14BQ5SR56 506 aa24.36■■□□□ 1.49
CTDSP2-204ENST00000548823 STAP2Q9UGK3 403 aa24.36■■□□□ 1.49
CTDSP2-204ENST00000548823 MYPNQ86TC9 1320 aa24.36■■□□□ 1.49
CTDSP2-204ENST00000548823 SGPL1O95470 568 aa24.35■■□□□ 1.49
CTDSP2-204ENST00000548823 CAPN2P17655 700 aa24.35■■□□□ 1.49
CTDSP2-204ENST00000548823 CASP7P55210 303 aa24.35■■□□□ 1.49
CTDSP2-204ENST00000548823 GCKRQ14397 625 aa24.35■■□□□ 1.49
CTDSP2-204ENST00000548823 PLEKHM2Q8IWE5 1019 aa24.35■■□□□ 1.49
CTDSP2-204ENST00000548823 DDRGK1Q96HY6 314 aa24.35■■□□□ 1.49
CTDSP2-204ENST00000548823 PNMA6EA0A0J9YXQ4 647 aa24.34■■□□□ 1.49
CTDSP2-204ENST00000548823 WRNIP1Q96S55 665 aa24.34■■□□□ 1.49
CTDSP2-204ENST00000548823 NBPF7P0C2Y1 421 aaPredicted RBP24.33■■□□□ 1.49
CTDSP2-204ENST00000548823 ANKRD23Q86SG2 305 aa24.33■■□□□ 1.49
CTDSP2-204ENST00000548823 ZKSCAN4Q969J2 545 aaPredicted RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 900.9 ms