RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 CCDC102BQ68D86 513 aa11.74□□□□□ -0.53
USP15-208ENST00000548524 MOB2Q70IA6 237 aa11.74□□□□□ -0.53
USP15-208ENST00000548524 ARMC9Q7Z3E5 817 aa11.74□□□□□ -0.53
USP15-208ENST00000548524 XAGE2Q96GT9 111 aa11.74□□□□□ -0.53
USP15-208ENST00000548524 TDRD3Q9H7E2 651 aaKnown RBP11.74□□□□□ -0.53
USP15-208ENST00000548524 ZNF70Q9UC06 446 aaPredicted RBP11.74□□□□□ -0.53
USP15-208ENST00000548524 A0A1B0GUL6 1792 aa11.74□□□□□ -0.53
USP15-208ENST00000548524 SEMA3EO15041 775 aa11.73□□□□□ -0.53
USP15-208ENST00000548524 SURF6O75683 361 aaKnown RBP11.73□□□□□ -0.53
USP15-208ENST00000548524 COL1A1P02452 1464 aaPredicted RBP11.73□□□□□ -0.53
USP15-208ENST00000548524 AOX1Q06278 1338 aa11.73□□□□□ -0.53
USP15-208ENST00000548524 SUPT20HL1Q3ZLR7 823 aa11.73□□□□□ -0.53
USP15-208ENST00000548524 COL13A1Q5TAT6 717 aaPredicted RBP11.73□□□□□ -0.53
USP15-208ENST00000548524 SSH3Q8TE77 659 aa11.73□□□□□ -0.53
USP15-208ENST00000548524 TMOD2Q9NZR1 351 aa11.73□□□□□ -0.53
USP15-208ENST00000548524 TCP10L2B9ZVM9 353 aa11.72□□□□□ -0.53
USP15-208ENST00000548524 PPP1R12BO60237 982 aaPredicted RBP11.72□□□□□ -0.53
USP15-208ENST00000548524 LDHBP07195 334 aaKnown RBP11.72□□□□□ -0.53
USP15-208ENST00000548524 SLC10A3P09131 477 aa11.72□□□□□ -0.53
USP15-208ENST00000548524 TNNI2P48788 182 aa11.72□□□□□ -0.53
USP15-208ENST00000548524 RASA3Q14644 834 aa11.72□□□□□ -0.53
USP15-208ENST00000548524 ZGPATQ8N5A5 531 aaKnown RBP11.72□□□□□ -0.53
USP15-208ENST00000548524 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.72□□□□□ -0.53
USP15-208ENST00000548524 ZDHHC15Q96MV8 337 aa11.72□□□□□ -0.53
USP15-208ENST00000548524 MRIQ9BWK5 157 aa11.72□□□□□ -0.53
USP15-208ENST00000548524 ANGEL1Q9UNK9 670 aaKnown RBP11.72□□□□□ -0.53
USP15-208ENST00000548524 TRPM7Q96QT4 1865 aa11.72□□□□□ -0.53
USP15-208ENST00000548524 FAM155AB1AL88 458 aaPredicted RBP11.71□□□□□ -0.53
USP15-208ENST00000548524 PRDX5P30044 214 aa11.71□□□□□ -0.53
USP15-208ENST00000548524 LBX1P52954 281 aa11.71□□□□□ -0.53
USP15-208ENST00000548524 KIF23Q02241 960 aaPredicted RBP11.71□□□□□ -0.53
USP15-208ENST00000548524 CEP85Q6P2H3 762 aa11.71□□□□□ -0.53
USP15-208ENST00000548524 HHIPL2Q6UWX4 724 aa11.71□□□□□ -0.53
USP15-208ENST00000548524 RASAL3Q86YV0 1011 aa11.71□□□□□ -0.53
USP15-208ENST00000548524 ZIC5Q96T25 663 aa11.71□□□□□ -0.53
USP15-208ENST00000548524 CHMP4BQ9H444 224 aaKnown RBP11.71□□□□□ -0.53
USP15-208ENST00000548524 PRDM10Q9NQV6 1147 aa11.71□□□□□ -0.53
USP15-208ENST00000548524 RYDENQ9NUL5 291 aaKnown RBP11.71□□□□□ -0.53
USP15-208ENST00000548524 DDX19BQ9UMR2 479 aa11.71□□□□□ -0.53
USP15-208ENST00000548524 COG6Q9Y2V7 657 aa11.71□□□□□ -0.53
USP15-208ENST00000548524 ZNF646O15015 1829 aaPredicted RBP11.7□□□□□ -0.54
USP15-208ENST00000548524 SALL1Q9NSC2 1324 aa11.7□□□□□ -0.54
USP15-208ENST00000548524 CA12O43570 354 aa11.7□□□□□ -0.54
USP15-208ENST00000548524 HSPA8P11142 646 aaKnown RBP11.7□□□□□ -0.54
USP15-208ENST00000548524 RASGRF1Q13972 1273 aa11.7□□□□□ -0.54
USP15-208ENST00000548524 NBPF12Q5TAG4 269 aaPredicted RBP11.7□□□□□ -0.54
USP15-208ENST00000548524 SPTY2D1Q68D10 685 aaPredicted RBP11.7□□□□□ -0.54
USP15-208ENST00000548524 APOBEC3HQ6NTF7 200 aaKnown RBP11.7□□□□□ -0.54
USP15-208ENST00000548524 DZIP1Q86YF9 867 aaKnown RBP11.7□□□□□ -0.54
USP15-208ENST00000548524 TNS4Q8IZW8 715 aa11.7□□□□□ -0.54
USP15-208ENST00000548524 FBXO22Q8NEZ5 403 aa11.7□□□□□ -0.54
USP15-208ENST00000548524 ABCF2Q9UG63 623 aa11.7□□□□□ -0.54
USP15-208ENST00000548524 NOP58Q9Y2X3 529 aaKnown RBP11.7□□□□□ -0.54
USP15-208ENST00000548524 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.7□□□□□ -0.54
USP15-208ENST00000548524 UQCRFS1P1P0C7P4 283 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
USP15-208ENST00000548524 CACNB3P54284 484 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 DIXDC1Q155Q3 683 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 TNNI3KQ59H18 835 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 TTC39AQ5SRH9 613 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 SLF2Q8IX21 1173 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 YTHDC1Q96MU7 727 aaKnown RBP11.69□□□□□ -0.54
USP15-208ENST00000548524 GPR108Q9NPR9 543 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 TSKSQ9UJT2 592 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 FZD1Q9UP38 647 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 FPGT-TNNI3KV9GXZ4 949 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 PAPPA2Q9BXP8 1791 aa11.69□□□□□ -0.54
USP15-208ENST00000548524 PDS5AQ29RF7 1337 aaKnown RBP11.68□□□□□ -0.54
USP15-208ENST00000548524 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
USP15-208ENST00000548524 LDLRAD1Q5T700 205 aa11.68□□□□□ -0.54
USP15-208ENST00000548524 IER5LQ5T953 404 aa11.68□□□□□ -0.54
USP15-208ENST00000548524 ERICH6Q7L0X2 663 aa11.68□□□□□ -0.54
USP15-208ENST00000548524 SLC10A4Q96EP9 437 aa11.68□□□□□ -0.54
USP15-208ENST00000548524 TMEM39BQ9GZU3 492 aa11.68□□□□□ -0.54
USP15-208ENST00000548524 HMMRO75330 724 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 ARID4AP29374 1257 aaPredicted RBP11.67□□□□□ -0.54
USP15-208ENST00000548524 PDE3AQ14432 1141 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 MAP3K11Q16584 847 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 HSP90AB4PQ58FF6 505 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 IFFO2Q5TF58 517 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 FKBP1CQ5VVH2 108 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 FAM83AQ86UY5 434 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 ERC1Q8IUD2 1116 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 RPAP2Q8IXW5 612 aaPredicted RBP11.67□□□□□ -0.54
USP15-208ENST00000548524 SPATA5Q8NB90 893 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 CSRNP1Q96S65 589 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 DBNDD2Q9BQY9 259 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 ZBTB40Q9NUA8 1239 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 USP40Q9NVE5 1235 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 HMG20BQ9P0W2 317 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 EXOC6BQ9Y2D4 811 aa11.67□□□□□ -0.54
USP15-208ENST00000548524 UNCXA6NJT0 531 aa11.66□□□□□ -0.54
USP15-208ENST00000548524 USP2O75604 605 aaPredicted RBP11.66□□□□□ -0.54
USP15-208ENST00000548524 C20orf194Q5TEA3 1177 aa11.66□□□□□ -0.54
USP15-208ENST00000548524 CDC42EP5Q6NZY7 148 aa11.66□□□□□ -0.54
USP15-208ENST00000548524 PI16Q6UXB8 463 aa11.66□□□□□ -0.54
USP15-208ENST00000548524 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
USP15-208ENST00000548524 HOOK2Q96ED9 719 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms