RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 RAI14Q9P0K7 980 aa14.48□□□□□ -0.09
RAB5C-204ENST00000547517 LRP2BPQ9P2M1 347 aa14.48□□□□□ -0.09
RAB5C-204ENST00000547517 ANGEL1Q9UNK9 670 aaKnown RBP14.48□□□□□ -0.09
RAB5C-204ENST00000547517 AKAP11Q9UKA4 1901 aa14.48□□□□□ -0.09
RAB5C-204ENST00000547517 MROH7-TTC4A0A0A0MT08 1334 aa14.47□□□□□ -0.09
RAB5C-204ENST00000547517 FAM155AB1AL88 458 aaPredicted RBP14.47□□□□□ -0.09
RAB5C-204ENST00000547517 SLC10A3P09131 477 aa14.47□□□□□ -0.09
RAB5C-204ENST00000547517 IFIT2P09913 472 aaKnown RBP14.47□□□□□ -0.09
RAB5C-204ENST00000547517 ZAP70P43403 619 aa14.47□□□□□ -0.09
RAB5C-204ENST00000547517 SUPT20HL1Q3ZLR7 823 aa14.47□□□□□ -0.09
RAB5C-204ENST00000547517 CDC42EP5Q6NZY7 148 aa14.47□□□□□ -0.09
RAB5C-204ENST00000547517 RASAL3Q86YV0 1011 aa14.47□□□□□ -0.09
RAB5C-204ENST00000547517 SLF2Q8IX21 1173 aa14.47□□□□□ -0.09
RAB5C-204ENST00000547517 AIDAQ96BJ3 306 aa14.47□□□□□ -0.09
RAB5C-204ENST00000547517 PPP1R12BO60237 982 aaPredicted RBP14.46□□□□□ -0.09
RAB5C-204ENST00000547517 BTDP43251 543 aa14.46□□□□□ -0.09
RAB5C-204ENST00000547517 NOGQ13253 232 aa14.46□□□□□ -0.09
RAB5C-204ENST00000547517 ZNF384Q8TF68 577 aa14.46□□□□□ -0.09
RAB5C-204ENST00000547517 CCDC102AQ96A19 550 aa14.46□□□□□ -0.09
RAB5C-204ENST00000547517 NSUN4Q96CB9 384 aaKnown RBP14.46□□□□□ -0.09
RAB5C-204ENST00000547517 TEPSINQ96N21 525 aa14.46□□□□□ -0.09
RAB5C-204ENST00000547517 LRRCC1Q9C099 1032 aa14.46□□□□□ -0.09
RAB5C-204ENST00000547517 USP40Q9NVE5 1235 aa14.46□□□□□ -0.09
RAB5C-204ENST00000547517 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.46□□□□□ -0.09
RAB5C-204ENST00000547517 PCDHB15Q9Y5E8 787 aa14.46□□□□□ -0.09
RAB5C-204ENST00000547517 NDUFB9Q9Y6M9 179 aa14.46□□□□□ -0.09
RAB5C-204ENST00000547517 RPAP1Q9BWH6 1393 aaPredicted RBP14.46□□□□□ -0.1
RAB5C-204ENST00000547517 OTOFQ9HC10 1997 aa14.45□□□□□ -0.1
RAB5C-204ENST00000547517 CYP2E1P05181 493 aaPredicted RBP14.45□□□□□ -0.1
RAB5C-204ENST00000547517 MAP2K2P36507 400 aa14.45□□□□□ -0.1
RAB5C-204ENST00000547517 GSTO1P78417 241 aa14.45□□□□□ -0.1
RAB5C-204ENST00000547517 MAP2K1Q02750 393 aaPredicted RBP14.45□□□□□ -0.1
RAB5C-204ENST00000547517 TCP10Q12799 353 aa14.45□□□□□ -0.1
RAB5C-204ENST00000547517 NFIAQ12857 509 aa14.45□□□□□ -0.1
RAB5C-204ENST00000547517 FAM83AQ86UY5 434 aa14.45□□□□□ -0.1
RAB5C-204ENST00000547517 ZIC5Q96T25 663 aa14.45□□□□□ -0.1
RAB5C-204ENST00000547517 PIH1D3Q9NQM4 214 aaKnown RBP14.45□□□□□ -0.1
RAB5C-204ENST00000547517 RFX7Q2KHR2 1363 aa14.45□□□□□ -0.1
RAB5C-204ENST00000547517 FOXN1O15353 648 aa14.44□□□□□ -0.1
RAB5C-204ENST00000547517 SMARCA5O60264 1052 aaPredicted RBP14.44□□□□□ -0.1
RAB5C-204ENST00000547517 COL13A1Q5TAT6 717 aaPredicted RBP14.44□□□□□ -0.1
RAB5C-204ENST00000547517 FKBP1CQ5VVH2 108 aa14.44□□□□□ -0.1
RAB5C-204ENST00000547517 WBP1LQ9NX94 342 aa14.44□□□□□ -0.1
RAB5C-204ENST00000547517 IDH1O75874 414 aaKnown RBP14.43□□□□□ -0.1
RAB5C-204ENST00000547517 IREB2P48200 963 aaKnown RBP14.43□□□□□ -0.1
RAB5C-204ENST00000547517 MKRN3Q13064 507 aaKnown RBP14.43□□□□□ -0.1
RAB5C-204ENST00000547517 MAP3K11Q16584 847 aa14.43□□□□□ -0.1
RAB5C-204ENST00000547517 NAA16Q6N069 864 aaPredicted RBP14.43□□□□□ -0.1
RAB5C-204ENST00000547517 FAM163AQ96GL9 167 aaPredicted RBP14.43□□□□□ -0.1
RAB5C-204ENST00000547517 CLMNQ96JQ2 1002 aa14.43□□□□□ -0.1
RAB5C-204ENST00000547517 DNAJC2Q99543 621 aaKnown RBP14.43□□□□□ -0.1
RAB5C-204ENST00000547517 BEGAINQ9BUH8 593 aa14.43□□□□□ -0.1
RAB5C-204ENST00000547517 FAM198AQ9UFP1 575 aa14.43□□□□□ -0.1
RAB5C-204ENST00000547517 MYO5AQ9Y4I1 1855 aaKnown RBP14.43□□□□□ -0.1
RAB5C-204ENST00000547517 GPR75-ASB3A0A0A6YYF3 556 aa14.42□□□□□ -0.1
RAB5C-204ENST00000547517 USP2O75604 605 aaPredicted RBP14.42□□□□□ -0.1
RAB5C-204ENST00000547517 LDHCP07864 332 aa14.42□□□□□ -0.1
RAB5C-204ENST00000547517 RGS3P49796 1198 aa14.42□□□□□ -0.1
RAB5C-204ENST00000547517 KIF23Q02241 960 aaPredicted RBP14.42□□□□□ -0.1
RAB5C-204ENST00000547517 PICALMQ13492 652 aa14.42□□□□□ -0.1
RAB5C-204ENST00000547517 LDLRAD1Q5T700 205 aa14.42□□□□□ -0.1
RAB5C-204ENST00000547517 FAM151AQ8WW52 585 aa14.42□□□□□ -0.1
RAB5C-204ENST00000547517 NOL10Q9BSC4 688 aaKnown RBP14.42□□□□□ -0.1
RAB5C-204ENST00000547517 ANTXR1Q9H6X2 564 aa14.42□□□□□ -0.1
RAB5C-204ENST00000547517 DCTPP1Q9H773 170 aa14.42□□□□□ -0.1
RAB5C-204ENST00000547517 SUPT16HQ9Y5B9 1047 aaKnown RBP14.42□□□□□ -0.1
RAB5C-204ENST00000547517 DOCK2Q92608 1830 aa14.42□□□□□ -0.1
RAB5C-204ENST00000547517 WDHD1O75717 1129 aaPredicted RBP14.41□□□□□ -0.1
RAB5C-204ENST00000547517 RHBDL3P58872 404 aa14.41□□□□□ -0.1
RAB5C-204ENST00000547517 ADGRA1Q86SQ6 560 aa14.41□□□□□ -0.1
RAB5C-204ENST00000547517 IDI2Q9BXS1 227 aa14.41□□□□□ -0.1
RAB5C-204ENST00000547517 DDX4Q9NQI0 724 aaKnown RBP14.41□□□□□ -0.1
RAB5C-204ENST00000547517 AATFQ9NY61 560 aaKnown RBP eCLIP14.41□□□□□ -0.1
RAB5C-204ENST00000547517 GOLIM4O00461 696 aa14.4□□□□□ -0.1
RAB5C-204ENST00000547517 ENTPD3O75355 529 aa14.4□□□□□ -0.1
RAB5C-204ENST00000547517 ZFPM1Q8IX07 1006 aa14.4□□□□□ -0.1
RAB5C-204ENST00000547517 ANKRD13AQ8IZ07 590 aa14.4□□□□□ -0.1
RAB5C-204ENST00000547517 MAGEB6Q8N7X4 407 aa14.4□□□□□ -0.1
RAB5C-204ENST00000547517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.4□□□□□ -0.1
RAB5C-204ENST00000547517 HOOK2Q96ED9 719 aa14.4□□□□□ -0.1
RAB5C-204ENST00000547517 TSKSQ9UJT2 592 aa14.4□□□□□ -0.1
RAB5C-204ENST00000547517 BAG3O95817 575 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 HSPA8P11142 646 aaKnown RBP14.39□□□□□ -0.11
RAB5C-204ENST00000547517 CYP7A1P22680 504 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 CTCFP49711 727 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-204ENST00000547517 MAP3K12Q12852 859 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 VGLL4Q14135 290 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 TTF1Q15361 905 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-204ENST00000547517 SPRYD7Q5W111 196 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 DCAF15Q66K64 600 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 MIGA2Q7L4E1 593 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 ZSCAN29Q8IWY8 852 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-204ENST00000547517 TEX11Q8IYF3 940 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.39□□□□□ -0.11
RAB5C-204ENST00000547517 EXOC6Q8TAG9 804 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 SH3RF3Q8TEJ3 882 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-204ENST00000547517 SLC10A4Q96EP9 437 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 EDC3Q96F86 508 aaKnown RBP14.39□□□□□ -0.11
RAB5C-204ENST00000547517 WNK4Q96J92 1243 aa14.39□□□□□ -0.11
RAB5C-204ENST00000547517 WRNIP1Q96S55 665 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms