RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
CIT-218ENST00000546026 ANAPC4Q9UJX5 808 aa12.06□□□□□ -0.48
CIT-218ENST00000546026 JAG2Q9Y219 1238 aa12.06□□□□□ -0.48
CIT-218ENST00000546026 CD2APQ9Y5K6 639 aa12.06□□□□□ -0.48
CIT-218ENST00000546026 WDR19Q8NEZ3 1342 aa12.06□□□□□ -0.48
CIT-218ENST00000546026 LAMA4Q16363 1823 aa12.05□□□□□ -0.48
CIT-218ENST00000546026 C21orf2O43822 256 aa12.05□□□□□ -0.48
CIT-218ENST00000546026 HAND2P61296 217 aa12.05□□□□□ -0.48
CIT-218ENST00000546026 TRDNQ13061 729 aa12.05□□□□□ -0.48
CIT-218ENST00000546026 GRIK5Q16478 980 aa12.05□□□□□ -0.48
CIT-218ENST00000546026 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
CIT-218ENST00000546026 AGXT2Q9BYV1 514 aa12.05□□□□□ -0.48
CIT-218ENST00000546026 MROH7-TTC4A0A0A0MT08 1334 aa12.05□□□□□ -0.48
CIT-218ENST00000546026 GPR75-ASB3A0A0A6YYF3 556 aa12.04□□□□□ -0.48
CIT-218ENST00000546026 PLCG2P16885 1265 aa12.04□□□□□ -0.48
CIT-218ENST00000546026 MCM5P33992 734 aa12.04□□□□□ -0.48
CIT-218ENST00000546026 TOB2Q14106 344 aaPredicted RBP12.04□□□□□ -0.48
CIT-218ENST00000546026 SBK1Q52WX2 424 aa12.04□□□□□ -0.48
CIT-218ENST00000546026 STRIP1Q5VSL9 837 aa12.04□□□□□ -0.48
CIT-218ENST00000546026 Q6ZUG5 572 aa12.04□□□□□ -0.48
CIT-218ENST00000546026 RALYLQ86SE5 291 aaKnown RBP12.04□□□□□ -0.48
CIT-218ENST00000546026 MB21D2Q8IYB1 491 aaPredicted RBP12.04□□□□□ -0.48
CIT-218ENST00000546026 MRIQ9BWK5 157 aa12.04□□□□□ -0.48
CIT-218ENST00000546026 RNF41Q9H4P4 317 aaPredicted RBP12.04□□□□□ -0.48
CIT-218ENST00000546026 CNNM2Q9H8M5 875 aa12.04□□□□□ -0.48
CIT-218ENST00000546026 AATFQ9NY61 560 aaKnown RBP eCLIP12.04□□□□□ -0.48
CIT-218ENST00000546026 GAKO14976 1311 aa12.04□□□□□ -0.48
CIT-218ENST00000546026 CHD4Q14839 1912 aa12.03□□□□□ -0.48
CIT-218ENST00000546026 ECE2O60344 883 aa12.03□□□□□ -0.48
CIT-218ENST00000546026 PCP11498 1178 aaKnown RBP12.03□□□□□ -0.48
CIT-218ENST00000546026 COL9A3Q14050 684 aaPredicted RBP12.03□□□□□ -0.48
CIT-218ENST00000546026 DALRD3Q5D0E6 543 aaKnown RBP12.03□□□□□ -0.48
CIT-218ENST00000546026 AKNAD1Q5T1N1 836 aa12.03□□□□□ -0.48
CIT-218ENST00000546026 NOL8Q76FK4 1167 aaKnown RBP12.03□□□□□ -0.48
CIT-218ENST00000546026 SDR42E1Q8WUS8 393 aa12.03□□□□□ -0.48
CIT-218ENST00000546026 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
CIT-218ENST00000546026 CHMP4CQ96CF2 233 aa12.03□□□□□ -0.48
CIT-218ENST00000546026 KRT23Q9C075 422 aa12.03□□□□□ -0.48
CIT-218ENST00000546026 NBPF3Q9H094 633 aa12.03□□□□□ -0.48
CIT-218ENST00000546026 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
CIT-218ENST00000546026 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.03□□□□□ -0.48
CIT-218ENST00000546026 USP17L3A6NCW0 530 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 USP17L4A6NCW7 530 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 PPIP5K2O43314 1243 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 PTGER2P43116 358 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 NT5C2P49902 561 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 NUCB2P80303 420 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 FGD1P98174 961 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 HDLBPQ00341 1268 aaKnown RBP12.02□□□□□ -0.49
CIT-218ENST00000546026 PPARAQ07869 468 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 DIXDC1Q155Q3 683 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 AOC3Q16853 763 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 MFSD6Q6ZSS7 791 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 USP17L1Q7RTZ2 530 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 TBC1D10CQ8IV04 446 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 MTA3Q9BTC8 594 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 DBNDD1Q9H9R9 158 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 DCP1AQ9NPI6 582 aaPredicted RBP12.02□□□□□ -0.49
CIT-218ENST00000546026 TPCN1Q9ULQ1 816 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 TIAM2Q8IVF5 1701 aa12.02□□□□□ -0.49
CIT-218ENST00000546026 MYH2Q9UKX2 1941 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
CIT-218ENST00000546026 PRC1O43663 620 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 FGRP09769 529 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 BTDP43251 543 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 EVCP57679 992 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 CTDSPL2Q05D32 466 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 ME3Q16798 604 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 DACT2Q5SW24 774 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 CTR9Q6PD62 1173 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 HHIPL2Q6UWX4 724 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 CERS5Q8N5B7 392 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 SH3RF3Q8TEJ3 882 aaPredicted RBP12.01□□□□□ -0.49
CIT-218ENST00000546026 FBXW7Q969H0 707 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 ZNF274Q96GC6 653 aaPredicted RBP12.01□□□□□ -0.49
CIT-218ENST00000546026 TMEM87BQ96K49 555 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 TCEANC2Q96MN5 208 aa12.01□□□□□ -0.49
CIT-218ENST00000546026 ARPP21Q9UBL0 812 aaPredicted RBP12.01□□□□□ -0.49
CIT-218ENST00000546026 MKRN1Q9UHC7 482 aaKnown RBP12.01□□□□□ -0.49
CIT-218ENST00000546026 MINDY4BA8MYZ0 360 aa12□□□□□ -0.49
CIT-218ENST00000546026 USP17L12C9JPN9 530 aa12□□□□□ -0.49
CIT-218ENST00000546026 USP17L21D6R901 530 aa12□□□□□ -0.49
CIT-218ENST00000546026 LARGE1O95461 756 aa12□□□□□ -0.49
CIT-218ENST00000546026 SLC3A2P08195 630 aaKnown RBP12□□□□□ -0.49
CIT-218ENST00000546026 USP5P45974 858 aa12□□□□□ -0.49
CIT-218ENST00000546026 ANTXR2P58335 489 aa12□□□□□ -0.49
CIT-218ENST00000546026 BRF1Q92994 677 aa12□□□□□ -0.49
CIT-218ENST00000546026 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
CIT-218ENST00000546026 TTF2Q9UNY4 1162 aaKnown RBP12□□□□□ -0.49
CIT-218ENST00000546026 DAGLAQ9Y4D2 1042 aa12□□□□□ -0.49
CIT-218ENST00000546026 B4E1Z4 1266 aa11.99□□□□□ -0.49
CIT-218ENST00000546026 PFKFB2O60825 505 aa11.99□□□□□ -0.49
CIT-218ENST00000546026 PDIA4P13667 645 aaKnown RBP11.99□□□□□ -0.49
CIT-218ENST00000546026 RHBDL3P58872 404 aa11.99□□□□□ -0.49
CIT-218ENST00000546026 RAB3GAP1Q15042 981 aa11.99□□□□□ -0.49
CIT-218ENST00000546026 CYB5R4Q7L1T6 521 aa11.99□□□□□ -0.49
CIT-218ENST00000546026 CCDC83Q8IWF9 413 aa11.99□□□□□ -0.49
CIT-218ENST00000546026 AMOTL1Q8IY63 956 aa11.99□□□□□ -0.49
CIT-218ENST00000546026 TEX11Q8IYF3 940 aa11.99□□□□□ -0.49
CIT-218ENST00000546026 LARGE2Q8N3Y3 721 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms