RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 NFICP08651 508 aa8.95□□□□□ -0.98
SNHG1-224ENST00000545688 GSTP1P09211 210 aaKnown RBP8.95□□□□□ -0.98
SNHG1-224ENST00000545688 ADMP35318 185 aa8.95□□□□□ -0.98
SNHG1-224ENST00000545688 ASPAP45381 313 aa8.95□□□□□ -0.98
SNHG1-224ENST00000545688 PPP2R3AQ06190 1150 aa8.95□□□□□ -0.98
SNHG1-224ENST00000545688 C3orf58Q8NDZ4 430 aa8.95□□□□□ -0.98
SNHG1-224ENST00000545688 FBF1Q8TES7 1133 aa8.95□□□□□ -0.98
SNHG1-224ENST00000545688 SEMA6CQ9H3T2 930 aa8.95□□□□□ -0.98
SNHG1-224ENST00000545688 GSX1Q9H4S2 264 aaPredicted RBP8.95□□□□□ -0.98
SNHG1-224ENST00000545688 ACSS3Q9H6R3 686 aa8.95□□□□□ -0.98
SNHG1-224ENST00000545688 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.94□□□□□ -0.98
SNHG1-224ENST00000545688 TMPRSS2O15393 492 aa8.94□□□□□ -0.98
SNHG1-224ENST00000545688 ZNF862O60290 1169 aa8.94□□□□□ -0.98
SNHG1-224ENST00000545688 SPINK2P20155 84 aa8.94□□□□□ -0.98
SNHG1-224ENST00000545688 HOXA10P31260 410 aaPredicted RBP8.94□□□□□ -0.98
SNHG1-224ENST00000545688 GIMAP7Q8NHV1 300 aa8.94□□□□□ -0.98
SNHG1-224ENST00000545688 STK35Q8TDR2 534 aa8.94□□□□□ -0.98
SNHG1-224ENST00000545688 TBC1D32Q96NH3 1257 aa8.94□□□□□ -0.98
SNHG1-224ENST00000545688 OSBPL1AQ9BXW6 950 aa8.94□□□□□ -0.98
SNHG1-224ENST00000545688 PIM2Q9P1W9 311 aa8.94□□□□□ -0.98
SNHG1-224ENST00000545688 SYNGAP1Q96PV0 1343 aa8.94□□□□□ -0.98
SNHG1-224ENST00000545688 MAP7Q14244 749 aa8.93□□□□□ -0.98
SNHG1-224ENST00000545688 ZAR1Q86SH2 424 aa8.93□□□□□ -0.98
SNHG1-224ENST00000545688 PDZD3Q86UT5 571 aa8.93□□□□□ -0.98
SNHG1-224ENST00000545688 SULF2Q8IWU5 870 aa8.93□□□□□ -0.98
SNHG1-224ENST00000545688 GATA6Q92908 595 aa8.93□□□□□ -0.98
SNHG1-224ENST00000545688 OSBPL7Q9BZF2 842 aa8.93□□□□□ -0.98
SNHG1-224ENST00000545688 PATL2C9JE40 543 aaKnown RBP8.92□□□□□ -0.98
SNHG1-224ENST00000545688 P4HBP07237 508 aaKnown RBP8.92□□□□□ -0.98
SNHG1-224ENST00000545688 ALG1LQ6GMV1 187 aa8.92□□□□□ -0.98
SNHG1-224ENST00000545688 DTX1Q86Y01 620 aa8.92□□□□□ -0.98
SNHG1-224ENST00000545688 KCNB2Q92953 911 aa8.92□□□□□ -0.98
SNHG1-224ENST00000545688 KRT82Q9NSB4 513 aa8.92□□□□□ -0.98
SNHG1-224ENST00000545688 LEMD3Q9Y2U8 911 aa8.92□□□□□ -0.98
SNHG1-224ENST00000545688 DYNC1LI2O43237 492 aaPredicted RBP8.91□□□□□ -0.98
SNHG1-224ENST00000545688 ADAMTS4O75173 837 aa8.91□□□□□ -0.98
SNHG1-224ENST00000545688 GSTT1P30711 240 aa8.91□□□□□ -0.98
SNHG1-224ENST00000545688 ATP2B2Q01814 1243 aa8.91□□□□□ -0.98
SNHG1-224ENST00000545688 KIF4BQ2VIQ3 1234 aa8.91□□□□□ -0.98
SNHG1-224ENST00000545688 CRIM1Q9NZV1 1036 aa8.91□□□□□ -0.98
SNHG1-224ENST00000545688 DAGLAQ9Y4D2 1042 aa8.91□□□□□ -0.98
SNHG1-224ENST00000545688 PCDHGC5Q9Y5F6 944 aa8.91□□□□□ -0.98
SNHG1-224ENST00000545688 FAM170BA6NMN3 283 aa8.9□□□□□ -0.98
SNHG1-224ENST00000545688 SLFN14P0C7P3 912 aa8.9□□□□□ -0.98
SNHG1-224ENST00000545688 ID3Q02535 119 aa8.9□□□□□ -0.98
SNHG1-224ENST00000545688 SEZ6L2Q6UXD5 910 aa8.9□□□□□ -0.98
SNHG1-224ENST00000545688 TPTE2Q6XPS3 522 aa8.9□□□□□ -0.98
SNHG1-224ENST00000545688 NECAB3Q96P71 396 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-224ENST00000545688 FANCD2OSQ96PS1 177 aa8.9□□□□□ -0.98
SNHG1-224ENST00000545688 METTL22Q9BUU2 404 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-224ENST00000545688 SRCIN1Q9C0H9 1055 aa8.9□□□□□ -0.98
SNHG1-224ENST00000545688 LGR6Q9HBX8 967 aa8.9□□□□□ -0.98
SNHG1-224ENST00000545688 FBXO24O75426 580 aa8.89□□□□□ -0.99
SNHG1-224ENST00000545688 FOSL1P15407 271 aa8.89□□□□□ -0.99
SNHG1-224ENST00000545688 NME2P22392 152 aa8.89□□□□□ -0.99
SNHG1-224ENST00000545688 ARNTP27540 789 aa8.89□□□□□ -0.99
SNHG1-224ENST00000545688 CPSF6Q16630 551 aaKnown RBP eCLIP8.89□□□□□ -0.99
SNHG1-224ENST00000545688 C1GALT1Q9NS00 363 aa8.89□□□□□ -0.99
SNHG1-224ENST00000545688 ATXN3LQ9H3M9 355 aa8.88□□□□□ -0.99
SNHG1-224ENST00000545688 DISC1Q9NRI5 854 aa8.88□□□□□ -0.99
SNHG1-224ENST00000545688 ENC1O14682 589 aa8.87□□□□□ -0.99
SNHG1-224ENST00000545688 GIPC1O14908 333 aa8.87□□□□□ -0.99
SNHG1-224ENST00000545688 GP2P55259 537 aaKnown RBP8.87□□□□□ -0.99
SNHG1-224ENST00000545688 HNRNPUQ00839 825 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNHG1-224ENST00000545688 ZNF252P-AS1Q0IIN9 211 aa8.87□□□□□ -0.99
SNHG1-224ENST00000545688 MSMPQ1L6U9 139 aa8.87□□□□□ -0.99
SNHG1-224ENST00000545688 MAP1SQ66K74 1059 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-224ENST00000545688 ZNF765Q7L2R6 523 aa8.87□□□□□ -0.99
SNHG1-224ENST00000545688 AEBP1Q8IUX7 1158 aa8.87□□□□□ -0.99
SNHG1-224ENST00000545688 EMILIN2Q9BXX0 1053 aa8.87□□□□□ -0.99
SNHG1-224ENST00000545688 PIDD1Q9HB75 910 aa8.87□□□□□ -0.99
SNHG1-224ENST00000545688 CBX8Q9HC52 389 aa8.87□□□□□ -0.99
SNHG1-224ENST00000545688 PPM1HQ9ULR3 514 aa8.87□□□□□ -0.99
SNHG1-224ENST00000545688 SPG7Q9UQ90 795 aa8.87□□□□□ -0.99
SNHG1-224ENST00000545688 OAS3Q9Y6K5 1087 aaKnown RBP8.87□□□□□ -0.99
SNHG1-224ENST00000545688 CYP26A1O43174 497 aa8.86□□□□□ -0.99
SNHG1-224ENST00000545688 PAGE1O75459 146 aa8.86□□□□□ -0.99
SNHG1-224ENST00000545688 LDHBP07195 334 aaKnown RBP8.86□□□□□ -0.99
SNHG1-224ENST00000545688 MPRIPQ6WCQ1 1025 aa8.86□□□□□ -0.99
SNHG1-224ENST00000545688 GPBAR1Q8TDU6 330 aa8.86□□□□□ -0.99
SNHG1-224ENST00000545688 KRTAP4-8Q9BYQ9 185 aa8.86□□□□□ -0.99
SNHG1-224ENST00000545688 C12orf49Q9H741 205 aa8.86□□□□□ -0.99
SNHG1-224ENST00000545688 BMP6P22004 513 aa8.85□□□□□ -0.99
SNHG1-224ENST00000545688 TTLL4Q14679 1199 aa8.85□□□□□ -0.99
SNHG1-224ENST00000545688 SND1Q7KZF4 910 aaKnown RBP eCLIP8.85□□□□□ -0.99
SNHG1-224ENST00000545688 PSMG3-AS1Q96PY0 264 aa8.85□□□□□ -0.99
SNHG1-224ENST00000545688 CEP44Q9C0F1 390 aa8.85□□□□□ -0.99
SNHG1-224ENST00000545688 WNT11O96014 354 aa8.84□□□□□ -0.99
SNHG1-224ENST00000545688 USP17L7P0C7H9 530 aa8.84□□□□□ -0.99
SNHG1-224ENST00000545688 HCLS1P14317 486 aaPredicted RBP8.84□□□□□ -0.99
SNHG1-224ENST00000545688 DUSP27Q5VZP5 1158 aa8.84□□□□□ -0.99
SNHG1-224ENST00000545688 SMYD4Q8IYR2 804 aaPredicted RBP8.84□□□□□ -0.99
SNHG1-224ENST00000545688 GRIN3AQ8TCU5 1115 aa8.84□□□□□ -0.99
SNHG1-224ENST00000545688 LRRC4CQ9HCJ2 640 aa8.84□□□□□ -0.99
SNHG1-224ENST00000545688 FAM8A1Q9UBU6 413 aa8.84□□□□□ -0.99
SNHG1-224ENST00000545688 RNGTTO60942 597 aaKnown RBP8.83□□□□□ -1
SNHG1-224ENST00000545688 NEFMP07197 916 aa8.83□□□□□ -1
SNHG1-224ENST00000545688 PDIA4P13667 645 aaKnown RBP8.83□□□□□ -1
SNHG1-224ENST00000545688 CYP27A1Q02318 531 aa8.83□□□□□ -1
SNHG1-224ENST00000545688 CDK5R2Q13319 367 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms