RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 STK38Q15208 465 aa20.63■□□□□ 0.89
SCARB1-208ENST00000544327 MTA3Q9BTC8 594 aa20.63■□□□□ 0.89
SCARB1-208ENST00000544327 NAPBQ9H115 298 aa20.63■□□□□ 0.89
SCARB1-208ENST00000544327 CLIC4Q9Y696 253 aa20.63■□□□□ 0.89
SCARB1-208ENST00000544327 STK36Q9NRP7 1315 aa20.63■□□□□ 0.89
SCARB1-208ENST00000544327 RGL2O15211 777 aa20.62■□□□□ 0.89
SCARB1-208ENST00000544327 SPTLC2O15270 562 aa20.62■□□□□ 0.89
SCARB1-208ENST00000544327 ANO10Q9NW15 660 aa20.62■□□□□ 0.89
SCARB1-208ENST00000544327 NIP7Q9Y221 180 aaKnown RBP eCLIP20.62■□□□□ 0.89
SCARB1-208ENST00000544327 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
SCARB1-208ENST00000544327 GSG1L2A8MUP6 293 aa20.62■□□□□ 0.89
SCARB1-208ENST00000544327 KIF28PB7ZC32 967 aa20.62■□□□□ 0.89
SCARB1-208ENST00000544327 CLEC4GQ6UXB4 293 aa20.62■□□□□ 0.89
SCARB1-208ENST00000544327 ACSBG1Q96GR2 724 aa20.62■□□□□ 0.89
SCARB1-208ENST00000544327 CDC5LQ99459 802 aaKnown RBP20.62■□□□□ 0.89
SCARB1-208ENST00000544327 KRT23Q9C075 422 aa20.62■□□□□ 0.89
SCARB1-208ENST00000544327 LTBP4Q8N2S1 1624 aa20.62■□□□□ 0.89
SCARB1-208ENST00000544327 ZBTB43O43298 467 aa20.61■□□□□ 0.89
SCARB1-208ENST00000544327 NTRK3Q16288 839 aa20.61■□□□□ 0.89
SCARB1-208ENST00000544327 AKNAD1Q5T1N1 836 aa20.61■□□□□ 0.89
SCARB1-208ENST00000544327 ANO1Q5XXA6 986 aa20.61■□□□□ 0.89
SCARB1-208ENST00000544327 C11orf57Q6ZUT1 292 aaPredicted RBP20.61■□□□□ 0.89
SCARB1-208ENST00000544327 RAB11FIP4Q86YS3 637 aa20.61■□□□□ 0.89
SCARB1-208ENST00000544327 SPC24Q8NBT2 197 aa20.61■□□□□ 0.89
SCARB1-208ENST00000544327 STAG1Q8WVM7 1258 aa20.61■□□□□ 0.89
SCARB1-208ENST00000544327 ALG1Q9BT22 464 aa20.61■□□□□ 0.89
SCARB1-208ENST00000544327 ZNF804BA4D1E1 1349 aa20.61■□□□□ 0.89
SCARB1-208ENST00000544327 TMEM67Q5HYA8 995 aa20.6■□□□□ 0.89
SCARB1-208ENST00000544327 TRIM5Q9C035 493 aa20.6■□□□□ 0.89
SCARB1-208ENST00000544327 FAM217BQ9NTX9 383 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-208ENST00000544327 ADAMTS2O95450 1211 aa20.6■□□□□ 0.89
SCARB1-208ENST00000544327 POLR3DP05423 398 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-208ENST00000544327 CDC27P30260 824 aa20.6■□□□□ 0.89
SCARB1-208ENST00000544327 CHRNDQ07001 517 aa20.6■□□□□ 0.89
SCARB1-208ENST00000544327 SF3A1Q15459 793 aaKnown RBP20.6■□□□□ 0.89
SCARB1-208ENST00000544327 SYNE3Q6ZMZ3 975 aa20.6■□□□□ 0.89
SCARB1-208ENST00000544327 NACAP1Q9BZK3 213 aa20.6■□□□□ 0.89
SCARB1-208ENST00000544327 ARMT1Q9H993 441 aa20.6■□□□□ 0.89
SCARB1-208ENST00000544327 GOLGA6L19H0YKK7 550 aa20.59■□□□□ 0.89
SCARB1-208ENST00000544327 SNAP23O00161 211 aa20.59■□□□□ 0.89
SCARB1-208ENST00000544327 RRP9O43818 475 aaKnown RBP20.59■□□□□ 0.89
SCARB1-208ENST00000544327 BCAMP50895 628 aa20.59■□□□□ 0.89
SCARB1-208ENST00000544327 AXDND1Q5T1B0 1012 aaPredicted RBP20.59■□□□□ 0.89
SCARB1-208ENST00000544327 PRIMPOLQ96LW4 560 aa20.59■□□□□ 0.89
SCARB1-208ENST00000544327 SENP2Q9HC62 589 aa20.59■□□□□ 0.89
SCARB1-208ENST00000544327 PYCARDQ9ULZ3 195 aa20.59■□□□□ 0.89
SCARB1-208ENST00000544327 UQCRHLA0A096LP55 91 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 FAM177BA6PVY3 158 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 GOLGA8AA7E2F4 631 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 UQCRHP07919 91 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 CMA1P23946 247 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 NDUFA8P51970 172 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 SLC39A14Q15043 492 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 KRT40Q6A162 431 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 MRFAP1L1Q96HT8 127 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 ZSWIM5Q9P217 1185 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 TACC3Q9Y6A5 838 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 COL4A1P02462 1669 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 CASZ1Q86V15 1759 aa20.58■□□□□ 0.89
SCARB1-208ENST00000544327 SCN7AQ01118 1682 aa20.58■□□□□ 0.88
SCARB1-208ENST00000544327 PTGS1P23219 599 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 RCAN1P53805 252 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 SF3B3Q15393 1217 aaKnown RBP20.57■□□□□ 0.88
SCARB1-208ENST00000544327 NFXL1Q6ZNB6 911 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 LCORLQ8N3X6 602 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 BPIFA3Q9BQP9 254 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 GJB4Q9NTQ9 266 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 A0A1B0GVL5 298 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 DYNC1I1O14576 645 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 PPP6R2O75170 966 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 U2AF2P26368 475 aaKnown RBP eCLIP20.57■□□□□ 0.88
SCARB1-208ENST00000544327 IARSP41252 1262 aaKnown RBP20.57■□□□□ 0.88
SCARB1-208ENST00000544327 CTDSPL2Q05D32 466 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 MFSD6Q6ZSS7 791 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 MICU3Q86XE3 530 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 VPS37DQ86XT2 251 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 DHX40Q8IX18 779 aaKnown RBP20.57■□□□□ 0.88
SCARB1-208ENST00000544327 CEP57L1Q8IYX8 460 aa20.57■□□□□ 0.88
SCARB1-208ENST00000544327 NAT10Q9H0A0 1025 aaKnown RBP20.57■□□□□ 0.88
SCARB1-208ENST00000544327 IFIT3O14879 490 aaKnown RBP20.56■□□□□ 0.88
SCARB1-208ENST00000544327 RANBP6O60518 1105 aaKnown RBP20.56■□□□□ 0.88
SCARB1-208ENST00000544327 TIGD1Q96MW7 591 aa20.56■□□□□ 0.88
SCARB1-208ENST00000544327 KIAA1468Q9P260 1216 aa20.56■□□□□ 0.88
SCARB1-208ENST00000544327 SLC12A7Q9Y666 1083 aa20.56■□□□□ 0.88
SCARB1-208ENST00000544327 SLC4A4Q9Y6R1 1079 aa20.56■□□□□ 0.88
SCARB1-208ENST00000544327 FAM237AA0A1B0GTK4 181 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 CCDC69A6NI79 296 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 FMNL1O95466 1100 aaPredicted RBP20.55■□□□□ 0.88
SCARB1-208ENST00000544327 IFNAR1P17181 557 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 UBE4AQ14139 1066 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 CCDC186Q7Z3E2 898 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 WASF1Q92558 559 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 AIFM3Q96NN9 605 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 SDF4Q9BRK5 362 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 RNF41Q9H4P4 317 aaPredicted RBP20.55■□□□□ 0.88
SCARB1-208ENST00000544327 PRKAB2O43741 272 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 TDO2P48775 406 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 TMTC2Q8N394 836 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 C17orf53Q8N3J3 647 aaPredicted RBP20.55■□□□□ 0.88
SCARB1-208ENST00000544327 MYRIPQ8NFW9 859 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms