RNA–Protein interactions for RNA: ENST00000543558.1

LINC02460-201, Transcript of long intergenic non-protein coding RNA 2460, humanhuman

TSL 4 BASIC

Gene LINC02460, Length 536 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02460-201ENST00000543558 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.32□□□□□ -1.4
LINC02460-201ENST00000543558 NPM2Q86SE8 214 aaKnown RBP6.32□□□□□ -1.4
LINC02460-201ENST00000543558 DTX1Q86Y01 620 aa6.32□□□□□ -1.4
LINC02460-201ENST00000543558 CLEC10AQ8IUN9 316 aa6.32□□□□□ -1.4
LINC02460-201ENST00000543558 SHKBP1Q8TBC3 707 aa6.32□□□□□ -1.4
LINC02460-201ENST00000543558 CRELD1Q96HD1 420 aa6.32□□□□□ -1.4
LINC02460-201ENST00000543558 FAM83CQ9BQN1 747 aa6.32□□□□□ -1.4
LINC02460-201ENST00000543558 BACH2Q9BYV9 841 aa6.32□□□□□ -1.4
LINC02460-201ENST00000543558 USP31Q70CQ4 1352 aa6.31□□□□□ -1.4
LINC02460-201ENST00000543558 RECKO95980 971 aa6.31□□□□□ -1.4
LINC02460-201ENST00000543558 ESRRAP11474 423 aaPredicted RBP6.31□□□□□ -1.4
LINC02460-201ENST00000543558 PIP4K2BP78356 416 aa6.31□□□□□ -1.4
LINC02460-201ENST00000543558 ZNF423Q2M1K9 1284 aa6.31□□□□□ -1.4
LINC02460-201ENST00000543558 RPS26P11Q5JNZ5 115 aaPredicted RBP6.31□□□□□ -1.4
LINC02460-201ENST00000543558 LDLRAD1Q5T700 205 aa6.31□□□□□ -1.4
LINC02460-201ENST00000543558 MEI1Q5TIA1 1274 aa6.31□□□□□ -1.4
LINC02460-201ENST00000543558 BEND4Q6ZU67 534 aa6.31□□□□□ -1.4
LINC02460-201ENST00000543558 TMEM87AQ8NBN3 555 aa6.31□□□□□ -1.4
LINC02460-201ENST00000543558 KCNF1Q9H3M0 494 aa6.31□□□□□ -1.4
LINC02460-201ENST00000543558 PPM1HQ9ULR3 514 aa6.31□□□□□ -1.4
LINC02460-201ENST00000543558 TTF2Q9UNY4 1162 aaKnown RBP6.31□□□□□ -1.4
LINC02460-201ENST00000543558 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
LINC02460-201ENST00000543558 SOX1O00570 391 aaPredicted RBP6.3□□□□□ -1.4
LINC02460-201ENST00000543558 SART1O43290 800 aaKnown RBP6.3□□□□□ -1.4
LINC02460-201ENST00000543558 FBXO24O75426 580 aa6.3□□□□□ -1.4
LINC02460-201ENST00000543558 HOXA10P31260 410 aaPredicted RBP6.3□□□□□ -1.4
LINC02460-201ENST00000543558 GRIK1P39086 918 aa6.3□□□□□ -1.4
LINC02460-201ENST00000543558 FAAP100Q0VG06 881 aa6.3□□□□□ -1.4
LINC02460-201ENST00000543558 TAF1CQ15572 869 aaPredicted RBP6.3□□□□□ -1.4
LINC02460-201ENST00000543558 INTS5Q6P9B9 1019 aaKnown RBP6.3□□□□□ -1.4
LINC02460-201ENST00000543558 ANKRD24Q8TF21 1146 aa6.3□□□□□ -1.4
LINC02460-201ENST00000543558 SLC7A3Q8WY07 619 aa6.3□□□□□ -1.4
LINC02460-201ENST00000543558 OSGEPQ9NPF4 335 aa6.3□□□□□ -1.4
LINC02460-201ENST00000543558 GPN3Q9UHW5 284 aaPredicted RBP6.3□□□□□ -1.4
LINC02460-201ENST00000543558 B3GALT4O96024 378 aa6.29□□□□□ -1.4
LINC02460-201ENST00000543558 ARL4DP49703 201 aa6.29□□□□□ -1.4
LINC02460-201ENST00000543558 ZNF157P51786 506 aaPredicted RBP6.29□□□□□ -1.4
LINC02460-201ENST00000543558 ANKRD34AQ69YU3 496 aa6.29□□□□□ -1.4
LINC02460-201ENST00000543558 TPTE2Q6XPS3 522 aa6.29□□□□□ -1.4
LINC02460-201ENST00000543558 WNT8BQ93098 351 aa6.29□□□□□ -1.4
LINC02460-201ENST00000543558 RUSC1Q9BVN2 902 aa6.29□□□□□ -1.4
LINC02460-201ENST00000543558 RNF208Q9H0X6 261 aa6.29□□□□□ -1.4
LINC02460-201ENST00000543558 WDR64B1ANS9 1081 aa6.28□□□□□ -1.4
LINC02460-201ENST00000543558 TXKP42681 527 aa6.28□□□□□ -1.4
LINC02460-201ENST00000543558 ST13P50502 369 aaKnown RBP6.28□□□□□ -1.4
LINC02460-201ENST00000543558 NECAB3Q96P71 396 aaPredicted RBP6.28□□□□□ -1.4
LINC02460-201ENST00000543558 CEP44Q9C0F1 390 aa6.28□□□□□ -1.4
LINC02460-201ENST00000543558 GSTM4Q03013 218 aa6.27□□□□□ -1.41
LINC02460-201ENST00000543558 PPP2R3AQ06190 1150 aa6.27□□□□□ -1.41
LINC02460-201ENST00000543558 C19orf57Q0VDD7 668 aa6.27□□□□□ -1.41
LINC02460-201ENST00000543558 CCDC85BQ15834 202 aaPredicted RBP6.27□□□□□ -1.41
LINC02460-201ENST00000543558 SGO2Q562F6 1265 aa6.27□□□□□ -1.41
LINC02460-201ENST00000543558 SHISA5Q8N114 240 aa6.27□□□□□ -1.41
LINC02460-201ENST00000543558 MFSD14AQ96MC6 490 aa6.27□□□□□ -1.41
LINC02460-201ENST00000543558 SOX17Q9H6I2 414 aaPredicted RBP6.27□□□□□ -1.41
LINC02460-201ENST00000543558 TMEM39AQ9NV64 488 aa6.27□□□□□ -1.41
LINC02460-201ENST00000543558 MEGF11A6BM72 1044 aa6.26□□□□□ -1.41
LINC02460-201ENST00000543558 ENC1O14682 589 aa6.26□□□□□ -1.41
LINC02460-201ENST00000543558 SCAMP3O14828 347 aaKnown RBP6.26□□□□□ -1.41
LINC02460-201ENST00000543558 DLGAP3O95886 979 aa6.26□□□□□ -1.41
LINC02460-201ENST00000543558 WNT11O96014 354 aa6.26□□□□□ -1.41
LINC02460-201ENST00000543558 CELA3AP09093 270 aa6.26□□□□□ -1.41
LINC02460-201ENST00000543558 MAP4P27816 1152 aaKnown RBP6.26□□□□□ -1.41
LINC02460-201ENST00000543558 FDX2Q6P4F2 183 aa6.26□□□□□ -1.41
LINC02460-201ENST00000543558 SV2BQ7L1I2 683 aa6.26□□□□□ -1.41
LINC02460-201ENST00000543558 DDX54Q8TDD1 881 aaKnown RBP6.26□□□□□ -1.41
LINC02460-201ENST00000543558 ADGRE2Q9UHX3 823 aa6.26□□□□□ -1.41
LINC02460-201ENST00000543558 HIF3AQ9Y2N7 669 aa6.26□□□□□ -1.41
LINC02460-201ENST00000543558 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
LINC02460-201ENST00000543558 ZNF76P36508 570 aa6.25□□□□□ -1.41
LINC02460-201ENST00000543558 NOC4LQ9BVI4 516 aaKnown RBP6.25□□□□□ -1.41
LINC02460-201ENST00000543558 TMPRSS13Q9BYE2 586 aa6.25□□□□□ -1.41
LINC02460-201ENST00000543558 METTL5Q9NRN9 209 aaKnown RBP6.25□□□□□ -1.41
LINC02460-201ENST00000543558 GAS2O43903 313 aaKnown RBP6.24□□□□□ -1.41
LINC02460-201ENST00000543558 EIF4EBP3O60516 100 aaPredicted RBP6.24□□□□□ -1.41
LINC02460-201ENST00000543558 PAGE1O75459 146 aa6.24□□□□□ -1.41
LINC02460-201ENST00000543558 F13BP05160 661 aa6.24□□□□□ -1.41
LINC02460-201ENST00000543558 TCF3P15923 654 aa6.24□□□□□ -1.41
LINC02460-201ENST00000543558 FANCCQ00597 558 aa6.24□□□□□ -1.41
LINC02460-201ENST00000543558 FBXL6Q8N531 539 aa6.24□□□□□ -1.41
LINC02460-201ENST00000543558 RNF34Q969K3 372 aa6.24□□□□□ -1.41
LINC02460-201ENST00000543558 TRIM56Q9BRZ2 755 aaKnown RBP6.24□□□□□ -1.41
LINC02460-201ENST00000543558 PIM2Q9P1W9 311 aa6.24□□□□□ -1.41
LINC02460-201ENST00000543558 LOC100289279A0A1B0GTE1 492 aa6.23□□□□□ -1.41
LINC02460-201ENST00000543558 TIAF1O95411 115 aa6.23□□□□□ -1.41
LINC02460-201ENST00000543558 NME2P22392 152 aa6.23□□□□□ -1.41
LINC02460-201ENST00000543558 HDLBPQ00341 1268 aaKnown RBP6.23□□□□□ -1.41
LINC02460-201ENST00000543558 AP3B2Q13367 1082 aa6.23□□□□□ -1.41
LINC02460-201ENST00000543558 POU4F3Q15319 338 aa6.23□□□□□ -1.41
LINC02460-201ENST00000543558 MAP3K11Q16584 847 aa6.23□□□□□ -1.41
LINC02460-201ENST00000543558 HS2ST1Q7LGA3 356 aa6.23□□□□□ -1.41
LINC02460-201ENST00000543558 SULF2Q8IWU5 870 aa6.23□□□□□ -1.41
LINC02460-201ENST00000543558 C12orf50Q8NA57 414 aaPredicted RBP6.23□□□□□ -1.41
LINC02460-201ENST00000543558 STK35Q8TDR2 534 aa6.23□□□□□ -1.41
LINC02460-201ENST00000543558 NRSN2Q9GZP1 204 aa6.23□□□□□ -1.41
LINC02460-201ENST00000543558 SAMM50Q9Y512 469 aa6.23□□□□□ -1.41
LINC02460-201ENST00000543558 CYP11A1P05108 521 aa6.22□□□□□ -1.41
LINC02460-201ENST00000543558 DRD2P14416 443 aa6.22□□□□□ -1.41
LINC02460-201ENST00000543558 YBX3P16989 372 aaKnown RBP eCLIP6.22□□□□□ -1.41
LINC02460-201ENST00000543558 BMP6P22004 513 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms