RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 HP1BP3Q5SSJ5 553 aaPredicted RBP6.74□□□□□ -1.33
LEMD3-204ENST00000542032 NXPE4Q6UWF7 544 aa6.74□□□□□ -1.33
LEMD3-204ENST00000542032 BEND4Q6ZU67 534 aa6.74□□□□□ -1.33
LEMD3-204ENST00000542032 EZH1Q92800 747 aaPredicted RBP6.74□□□□□ -1.33
LEMD3-204ENST00000542032 SETDB2Q96T68 719 aa6.74□□□□□ -1.33
LEMD3-204ENST00000542032 ZNF865P0CJ78 1059 aaPredicted RBP6.73□□□□□ -1.33
LEMD3-204ENST00000542032 ADH5P11766 374 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 MAP4P27816 1152 aaKnown RBP6.73□□□□□ -1.33
LEMD3-204ENST00000542032 FCGRTP55899 365 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 ALG1LQ6GMV1 187 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 CDPF1Q6NVV7 123 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 DTHD1Q6ZMT9 781 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 ANKRD24Q8TF21 1146 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 DBNDD2Q9BQY9 259 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 CORO1BQ9BR76 489 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 OSBPL7Q9BZF2 842 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 SRCIN1Q9C0H9 1055 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 PPP4R2Q9NY27 417 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 WWC3Q9ULE0 1092 aa6.73□□□□□ -1.33
LEMD3-204ENST00000542032 GAS2O43903 313 aaKnown RBP6.72□□□□□ -1.33
LEMD3-204ENST00000542032 MAPK8P45983 427 aa6.72□□□□□ -1.33
LEMD3-204ENST00000542032 SND1Q7KZF4 910 aaKnown RBP eCLIP6.72□□□□□ -1.33
LEMD3-204ENST00000542032 PDZD3Q86UT5 571 aa6.72□□□□□ -1.33
LEMD3-204ENST00000542032 WDR18Q9BV38 432 aa6.72□□□□□ -1.33
LEMD3-204ENST00000542032 TMEM39AQ9NV64 488 aa6.72□□□□□ -1.33
LEMD3-204ENST00000542032 PRR19A6NJB7 356 aa6.71□□□□□ -1.34
LEMD3-204ENST00000542032 GIPC1O14908 333 aa6.71□□□□□ -1.34
LEMD3-204ENST00000542032 AOC2O75106 756 aa6.71□□□□□ -1.34
LEMD3-204ENST00000542032 P4HBP07237 508 aaKnown RBP6.71□□□□□ -1.34
LEMD3-204ENST00000542032 PDIA4P13667 645 aaKnown RBP6.71□□□□□ -1.34
LEMD3-204ENST00000542032 ZNF157P51786 506 aaPredicted RBP6.71□□□□□ -1.34
LEMD3-204ENST00000542032 COL19A1Q14993 1142 aa6.71□□□□□ -1.34
LEMD3-204ENST00000542032 ZNF124Q15973 351 aa6.71□□□□□ -1.34
LEMD3-204ENST00000542032 DTX1Q86Y01 620 aa6.71□□□□□ -1.34
LEMD3-204ENST00000542032 KCNF1Q9H3M0 494 aa6.71□□□□□ -1.34
LEMD3-204ENST00000542032 KRT82Q9NSB4 513 aa6.71□□□□□ -1.34
LEMD3-204ENST00000542032 ACTL7BQ9Y614 415 aa6.71□□□□□ -1.34
LEMD3-204ENST00000542032 ZNF862O60290 1169 aa6.7□□□□□ -1.34
LEMD3-204ENST00000542032 GSTP1P09211 210 aaKnown RBP6.7□□□□□ -1.34
LEMD3-204ENST00000542032 GRIK1P39086 918 aa6.7□□□□□ -1.34
LEMD3-204ENST00000542032 ABI1Q8IZP0 508 aa6.7□□□□□ -1.34
LEMD3-204ENST00000542032 ASIC4Q96FT7 647 aa6.7□□□□□ -1.34
LEMD3-204ENST00000542032 CCDC86Q9H6F5 360 aaKnown RBP6.7□□□□□ -1.34
LEMD3-204ENST00000542032 ACSS3Q9H6R3 686 aa6.7□□□□□ -1.34
LEMD3-204ENST00000542032 CACNA2D2Q9NY47 1150 aa6.7□□□□□ -1.34
LEMD3-204ENST00000542032 PCDHGC5Q9Y5F6 944 aa6.7□□□□□ -1.34
LEMD3-204ENST00000542032 DBX1A6NMT0 343 aa6.69□□□□□ -1.34
LEMD3-204ENST00000542032 GSTT1P30711 240 aa6.69□□□□□ -1.34
LEMD3-204ENST00000542032 KIF4BQ2VIQ3 1234 aa6.69□□□□□ -1.34
LEMD3-204ENST00000542032 ZNF648Q5T619 568 aaPredicted RBP6.69□□□□□ -1.34
LEMD3-204ENST00000542032 INTS5Q6P9B9 1019 aaKnown RBP6.69□□□□□ -1.34
LEMD3-204ENST00000542032 SHKBP1Q8TBC3 707 aa6.69□□□□□ -1.34
LEMD3-204ENST00000542032 STK35Q8TDR2 534 aa6.69□□□□□ -1.34
LEMD3-204ENST00000542032 FBLIM1Q8WUP2 373 aa6.69□□□□□ -1.34
LEMD3-204ENST00000542032 WDR89Q96FK6 387 aaPredicted RBP6.69□□□□□ -1.34
LEMD3-204ENST00000542032 NECAB3Q96P71 396 aaPredicted RBP6.69□□□□□ -1.34
LEMD3-204ENST00000542032 PPM1HQ9ULR3 514 aa6.69□□□□□ -1.34
LEMD3-204ENST00000542032 NCANO14594 1321 aa6.69□□□□□ -1.34
LEMD3-204ENST00000542032 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.68□□□□□ -1.34
LEMD3-204ENST00000542032 FAM95CA0A1B0GW59 222 aa6.68□□□□□ -1.34
LEMD3-204ENST00000542032 TMPRSS2O15393 492 aa6.68□□□□□ -1.34
LEMD3-204ENST00000542032 PPP2R3AQ06190 1150 aa6.68□□□□□ -1.34
LEMD3-204ENST00000542032 ZNF252P-AS1Q0IIN9 211 aa6.68□□□□□ -1.34
LEMD3-204ENST00000542032 AKAP4Q5JQC9 854 aa6.68□□□□□ -1.34
LEMD3-204ENST00000542032 SEZ6L2Q6UXD5 910 aa6.68□□□□□ -1.34
LEMD3-204ENST00000542032 AEBP1Q8IUX7 1158 aa6.68□□□□□ -1.34
LEMD3-204ENST00000542032 GATA6Q92908 595 aa6.68□□□□□ -1.34
LEMD3-204ENST00000542032 FAM105AQ9NUU6 356 aa6.68□□□□□ -1.34
LEMD3-204ENST00000542032 GPN3Q9UHW5 284 aaPredicted RBP6.68□□□□□ -1.34
LEMD3-204ENST00000542032 PPP1R9AQ9ULJ8 1098 aa6.68□□□□□ -1.34
LEMD3-204ENST00000542032 AKAP2Q9Y2D5 859 aa6.68□□□□□ -1.34
LEMD3-204ENST00000542032 PRRG2O14669 202 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 ENC1O14682 589 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 F13BP05160 661 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 LIG1P18858 919 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 NME2P22392 152 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 ARNTP27540 789 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 USP11P51784 963 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 ATP2B2Q01814 1243 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 PDE3AQ14432 1141 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 DNAJC14Q6Y2X3 702 aaPredicted RBP6.67□□□□□ -1.34
LEMD3-204ENST00000542032 FRMD6Q96NE9 622 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 SEMA6CQ9H3T2 930 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 C12orf49Q9H741 205 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 RAD18Q9NS91 495 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 CRIM1Q9NZV1 1036 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 PRKAG2Q9UGJ0 569 aa6.67□□□□□ -1.34
LEMD3-204ENST00000542032 LDHBP07195 334 aaKnown RBP6.66□□□□□ -1.34
LEMD3-204ENST00000542032 BMP6P22004 513 aa6.66□□□□□ -1.34
LEMD3-204ENST00000542032 RXRBP28702 533 aa6.66□□□□□ -1.34
LEMD3-204ENST00000542032 CPSF6Q16630 551 aaKnown RBP eCLIP6.66□□□□□ -1.34
LEMD3-204ENST00000542032 PAOXQ6QHF9 649 aa6.66□□□□□ -1.34
LEMD3-204ENST00000542032 DYMQ7RTS9 669 aa6.66□□□□□ -1.34
LEMD3-204ENST00000542032 SULF2Q8IWU5 870 aa6.66□□□□□ -1.34
LEMD3-204ENST00000542032 SHISA5Q8N114 240 aa6.66□□□□□ -1.34
LEMD3-204ENST00000542032 MFSD14AQ96MC6 490 aa6.66□□□□□ -1.34
LEMD3-204ENST00000542032 YIPF2Q9BWQ6 316 aa6.66□□□□□ -1.34
LEMD3-204ENST00000542032 SPG7Q9UQ90 795 aa6.66□□□□□ -1.34
LEMD3-204ENST00000542032 ANKRD33BA6NCL7 494 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms