RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 Q3C1V9 767 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 DALRD3Q5D0E6 543 aaKnown RBP8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 CCDC158Q5M9N0 1113 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 STYK1Q6J9G0 422 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 GRAPLQ8TC17 118 aaPredicted RBP8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 ANKRD2Q9GZV1 360 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 OSBPL3Q9H4L5 887 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 STAP2Q9UGK3 403 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 WWC3Q9ULE0 1092 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 TNRC6CQ9HCJ0 1690 aaKnown RBP8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 RIC1Q4ADV7 1423 aa8.1□□□□□ -1.11
CLTCL1-206ENST00000540896 DDX60Q8IY21 1712 aaKnown RBP8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 TTC41PQ6P2S7 1318 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 A0A1B0GUL7 405 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 GLRX3O76003 335 aaKnown RBP8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 IFIT1P09914 478 aaKnown RBP8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 SLC5A1P13866 664 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 ALDH1B1P30837 517 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 CHRNDQ07001 517 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 TTC39AQ5SRH9 613 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 TTC22Q5TAA0 569 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 TTLL6Q8N841 843 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 LPIN2Q92539 896 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 CNKSR1Q969H4 720 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 RILPL2Q969X0 211 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 THAP11Q96EK4 314 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 CRAMP1Q96RY5 1269 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 ANKIB1Q9P2G1 1089 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 MINPP1Q9UNW1 487 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 SLC27A5Q9Y2P5 690 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 KIAA1551Q9HCM1 1747 aa8.09□□□□□ -1.11
CLTCL1-206ENST00000540896 AOX1Q06278 1338 aa8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 LAMB2P55268 1798 aa8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 ZBTB24O43167 697 aaPredicted RBP8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 MAP4K4O95819 1239 aaPredicted RBP8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 GPR162Q16538 588 aa8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 BMP2KLQ5H9B9 411 aa8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 BRICD5Q6PL45 260 aa8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 TMC4Q7Z404 712 aa8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 XAGE2Q96GT9 111 aa8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 DBNDD2Q9BQY9 259 aa8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 TLR7Q9NYK1 1049 aaKnown RBP8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 DBNLQ9UJU6 430 aaKnown RBP8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 BCS1LQ9Y276 419 aa8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 COL11A2P13942 1736 aaPredicted RBP8.08□□□□□ -1.12
CLTCL1-206ENST00000540896 SALL3Q9BXA9 1300 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 FAM187AA6NFU0 413 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 ATP5JP18859 108 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 SDSP20132 328 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 ADORA1P30542 326 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 MAP2K5Q13163 448 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 PRPF40BQ6NWY9 871 aaKnown RBP8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 CASC1Q6TDU7 716 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 VPS37DQ86XT2 251 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 CNTROBQ8N137 903 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 VGLL2Q8N8G2 317 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 PI4K2BQ8TCG2 481 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 BOLA2Q9H3K6 86 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 NSFL1CQ9UNZ2 370 aaKnown RBP8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 DLEC1Q9Y238 1755 aa8.07□□□□□ -1.12
CLTCL1-206ENST00000540896 MYH3P11055 1940 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 SNAP23O00161 211 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 TNFRSF10AO00220 468 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 C21orf2O43822 256 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 CDC45O75419 566 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 GSPT1P15170 499 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 YBX3P16989 372 aaKnown RBP eCLIP8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 UBE4AQ14139 1066 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 MSS51Q4VC12 460 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 CAVIN4Q5BKX8 364 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 PLA2G2CQ5R387 149 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 SP8Q8IXZ3 490 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 PHOX2BQ99453 314 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 DNAJC2Q99543 621 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 GNL3LQ9NVN8 582 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 LEMD3Q9Y2U8 911 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 FCF1Q9Y324 198 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 ATP6V0A2Q9Y487 856 aa8.06□□□□□ -1.12
CLTCL1-206ENST00000540896 ZNF804BA4D1E1 1349 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 XDHP47989 1333 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 ZNF609O15014 1411 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 TAF1P21675 1872 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 BRCA1P38398 1863 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 GOLGB1Q14789 3259 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 C6orf229H3BNL8 230 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 IRF6O14896 467 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 FRAT2O75474 233 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 UQCRFS1P1P0C7P4 283 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 FGFR2P21802 821 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 ATP2B4P23634 1241 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 USP46P62068 366 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 GPSM2P81274 684 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 FKBP4Q02790 459 aaKnown RBP eCLIP8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 CCDC102BQ68D86 513 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 OLFM4Q6UX06 510 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 FAM160A2Q8N612 972 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 C7orf43Q8WVR3 580 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 NLRP7Q8WX94 980 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms