RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 SP3Q02447 781 aa21.5■■□□□ 1.03
PDCD2-207ENST00000539212 TCP10Q12799 353 aa21.5■■□□□ 1.03
PDCD2-207ENST00000539212 NFIAQ12857 509 aa21.5■■□□□ 1.03
PDCD2-207ENST00000539212 CEP126Q9P2H0 1117 aa21.5■■□□□ 1.03
PDCD2-207ENST00000539212 PTPN22Q9Y2R2 807 aa21.5■■□□□ 1.03
PDCD2-207ENST00000539212 GTF2A2P52657 109 aa21.49■■□□□ 1.03
PDCD2-207ENST00000539212 RARSP54136 660 aaKnown RBP21.49■■□□□ 1.03
PDCD2-207ENST00000539212 FKBP1CQ5VVH2 108 aa21.49■■□□□ 1.03
PDCD2-207ENST00000539212 CDC42EP5Q6NZY7 148 aa21.49■■□□□ 1.03
PDCD2-207ENST00000539212 TNNQ9UQP3 1299 aa21.49■■□□□ 1.03
PDCD2-207ENST00000539212 POTEFA5A3E0 1075 aa21.48■■□□□ 1.03
PDCD2-207ENST00000539212 IRF6O14896 467 aa21.48■■□□□ 1.03
PDCD2-207ENST00000539212 CT47B1P0C2W7 299 aaPredicted RBP21.48■■□□□ 1.03
PDCD2-207ENST00000539212 INPP5BP32019 993 aa21.48■■□□□ 1.03
PDCD2-207ENST00000539212 EFCC1Q9HA90 598 aa21.48■■□□□ 1.03
PDCD2-207ENST00000539212 IL15P40933 162 aaPredicted RBP21.47■■□□□ 1.03
PDCD2-207ENST00000539212 ERO1BQ86YB8 467 aa21.47■■□□□ 1.03
PDCD2-207ENST00000539212 FAM151AQ8WW52 585 aa21.47■■□□□ 1.03
PDCD2-207ENST00000539212 FBXO3Q9UK99 471 aa21.47■■□□□ 1.03
PDCD2-207ENST00000539212 BTBD19C9JJ37 291 aa21.46■■□□□ 1.03
PDCD2-207ENST00000539212 LDHBP07195 334 aaKnown RBP21.46■■□□□ 1.03
PDCD2-207ENST00000539212 DCAF15Q66K64 600 aa21.46■■□□□ 1.03
PDCD2-207ENST00000539212 ZFPM1Q8IX07 1006 aa21.46■■□□□ 1.03
PDCD2-207ENST00000539212 ZNF341Q9BYN7 854 aa21.46■■□□□ 1.03
PDCD2-207ENST00000539212 ZFYVE28Q9HCC9 887 aa21.46■■□□□ 1.03
PDCD2-207ENST00000539212 COPRSQ9NQ92 184 aa21.46■■□□□ 1.03
PDCD2-207ENST00000539212 FAM198AQ9UFP1 575 aa21.46■■□□□ 1.03
PDCD2-207ENST00000539212 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.46■■□□□ 1.03
PDCD2-207ENST00000539212 ECM2O94769 699 aaPredicted RBP21.45■■□□□ 1.02
PDCD2-207ENST00000539212 CCDC102BQ68D86 513 aa21.45■■□□□ 1.02
PDCD2-207ENST00000539212 ARHGAP39Q9C0H5 1083 aa21.45■■□□□ 1.02
PDCD2-207ENST00000539212 USP40Q9NVE5 1235 aa21.45■■□□□ 1.02
PDCD2-207ENST00000539212 GNL3LQ9NVN8 582 aaKnown RBP21.45■■□□□ 1.02
PDCD2-207ENST00000539212 SALL1Q9NSC2 1324 aa21.45■■□□□ 1.02
PDCD2-207ENST00000539212 DOCK1Q14185 1865 aa21.44■■□□□ 1.02
PDCD2-207ENST00000539212 CCER2I3L3R5 266 aa21.44■■□□□ 1.02
PDCD2-207ENST00000539212 CETPP11597 493 aa21.44■■□□□ 1.02
PDCD2-207ENST00000539212 TIMM10P62072 90 aa21.44■■□□□ 1.02
PDCD2-207ENST00000539212 PPIL2Q13356 520 aa21.44■■□□□ 1.02
PDCD2-207ENST00000539212 RASGRF1Q13972 1273 aa21.44■■□□□ 1.02
PDCD2-207ENST00000539212 PRPF38BQ5VTL8 546 aaKnown RBP21.44■■□□□ 1.02
PDCD2-207ENST00000539212 DENND2AQ9ULE3 1009 aa21.44■■□□□ 1.02
PDCD2-207ENST00000539212 PTPRFP10586 1907 aa21.44■■□□□ 1.02
PDCD2-207ENST00000539212 PHIPQ8WWQ0 1821 aa21.43■■□□□ 1.02
PDCD2-207ENST00000539212 SRGAP3O43295 1099 aa21.43■■□□□ 1.02
PDCD2-207ENST00000539212 SNAPC2Q13487 334 aa21.43■■□□□ 1.02
PDCD2-207ENST00000539212 INTS3Q68E01 1043 aaKnown RBP21.43■■□□□ 1.02
PDCD2-207ENST00000539212 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.43■■□□□ 1.02
PDCD2-207ENST00000539212 HOOK2Q96ED9 719 aa21.43■■□□□ 1.02
PDCD2-207ENST00000539212 PTCH2Q9Y6C5 1203 aa21.43■■□□□ 1.02
PDCD2-207ENST00000539212 RFX7Q2KHR2 1363 aa21.43■■□□□ 1.02
PDCD2-207ENST00000539212 SEMA3EO15041 775 aa21.42■■□□□ 1.02
PDCD2-207ENST00000539212 SLURP2P0DP57 97 aa21.42■■□□□ 1.02
PDCD2-207ENST00000539212 TFCP2Q12800 502 aa21.42■■□□□ 1.02
PDCD2-207ENST00000539212 ATRNL1Q5VV63 1379 aa21.42■■□□□ 1.02
PDCD2-207ENST00000539212 ARMC5Q96C12 935 aa21.42■■□□□ 1.02
PDCD2-207ENST00000539212 MGAMO43451 1857 aa21.41■■□□□ 1.02
PDCD2-207ENST00000539212 A0A1B0GUL7 405 aa21.41■■□□□ 1.02
PDCD2-207ENST00000539212 TRIM27P14373 513 aa21.41■■□□□ 1.02
PDCD2-207ENST00000539212 PPATQ06203 517 aa21.41■■□□□ 1.02
PDCD2-207ENST00000539212 ABCF2Q9UG63 623 aa21.41■■□□□ 1.02
PDCD2-207ENST00000539212 ZNF112Q9UJU3 913 aa21.41■■□□□ 1.02
PDCD2-207ENST00000539212 KIAA0100Q14667 2235 aaKnown RBP21.41■■□□□ 1.02
PDCD2-207ENST00000539212 GAKO14976 1311 aa21.4■■□□□ 1.02
PDCD2-207ENST00000539212 TLR2O60603 784 aa21.4■■□□□ 1.02
PDCD2-207ENST00000539212 BCAR3O75815 825 aa21.4■■□□□ 1.02
PDCD2-207ENST00000539212 RGS3P49796 1198 aa21.4■■□□□ 1.02
PDCD2-207ENST00000539212 XAGE2Q96GT9 111 aa21.4■■□□□ 1.02
PDCD2-207ENST00000539212 ATAD5Q96QE3 1844 aa21.4■■□□□ 1.02
PDCD2-207ENST00000539212 MYO5AQ9Y4I1 1855 aaKnown RBP21.39■■□□□ 1.02
PDCD2-207ENST00000539212 MYCP01106 439 aaPredicted RBP21.39■■□□□ 1.01
PDCD2-207ENST00000539212 SH3BP5LQ7L8J4 393 aa21.39■■□□□ 1.01
PDCD2-207ENST00000539212 DZIP1Q86YF9 867 aaKnown RBP21.39■■□□□ 1.01
PDCD2-207ENST00000539212 ARHGAP45Q92619 1136 aa21.39■■□□□ 1.01
PDCD2-207ENST00000539212 FRAT1Q92837 279 aaPredicted RBP21.39■■□□□ 1.01
PDCD2-207ENST00000539212 HDAC5Q9UQL6 1122 aa21.39■■□□□ 1.01
PDCD2-207ENST00000539212 GNAI3P08754 354 aa21.38■■□□□ 1.01
PDCD2-207ENST00000539212 EN2P19622 333 aaPredicted RBP21.38■■□□□ 1.01
PDCD2-207ENST00000539212 KCNA4P22459 653 aa21.38■■□□□ 1.01
PDCD2-207ENST00000539212 CTGFP29279 349 aa21.38■■□□□ 1.01
PDCD2-207ENST00000539212 MTX1Q13505 466 aa21.38■■□□□ 1.01
PDCD2-207ENST00000539212 MOGSQ13724 837 aa21.38■■□□□ 1.01
PDCD2-207ENST00000539212 PI16Q6UXB8 463 aa21.38■■□□□ 1.01
PDCD2-207ENST00000539212 CLUAP1Q96AJ1 413 aa21.38■■□□□ 1.01
PDCD2-207ENST00000539212 ZNF333Q96JL9 665 aa21.38■■□□□ 1.01
PDCD2-207ENST00000539212 DDX4Q9NQI0 724 aaKnown RBP21.38■■□□□ 1.01
PDCD2-207ENST00000539212 CPA4Q9UI42 421 aa21.38■■□□□ 1.01
PDCD2-207ENST00000539212 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
PDCD2-207ENST00000539212 CDK5RAP2Q96SN8 1893 aa21.37■■□□□ 1.01
PDCD2-207ENST00000539212 PNMA6EA0A0J9YXQ4 647 aa21.37■■□□□ 1.01
PDCD2-207ENST00000539212 BTDP43251 543 aa21.37■■□□□ 1.01
PDCD2-207ENST00000539212 LACTBP83111 547 aaPredicted RBP21.37■■□□□ 1.01
PDCD2-207ENST00000539212 PICALMQ13492 652 aa21.37■■□□□ 1.01
PDCD2-207ENST00000539212 NOL9Q5SY16 702 aaKnown RBP21.37■■□□□ 1.01
PDCD2-207ENST00000539212 ZNF384Q8TF68 577 aa21.37■■□□□ 1.01
PDCD2-207ENST00000539212 ZCCHC17Q9NP64 241 aaKnown RBP21.37■■□□□ 1.01
PDCD2-207ENST00000539212 KCNH4Q9UQ05 1017 aa21.37■■□□□ 1.01
PDCD2-207ENST00000539212 ADGRA2Q96PE1 1338 aa21.36■■□□□ 1.01
PDCD2-207ENST00000539212 DDTLA6NHG4 134 aaPredicted RBP21.36■■□□□ 1.01
PDCD2-207ENST00000539212 PDHXO00330 501 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms