RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PHACTR3Q96KR7 559 aa18.9■□□□□ 0.62
SCARB1-205ENST00000538291 IFT74Q96LB3 600 aa18.9■□□□□ 0.62
SCARB1-205ENST00000538291 MTUS1Q9ULD2 1270 aa18.9■□□□□ 0.62
SCARB1-205ENST00000538291 TRAF5O00463 557 aa18.9■□□□□ 0.62
SCARB1-205ENST00000538291 DEXIO95424 95 aa18.9■□□□□ 0.62
SCARB1-205ENST00000538291 DDX23Q9BUQ8 820 aaKnown RBP18.9■□□□□ 0.62
SCARB1-205ENST00000538291 MAK16Q9BXY0 300 aaKnown RBP18.9■□□□□ 0.62
SCARB1-205ENST00000538291 KIFAP3Q92845 792 aa18.9■□□□□ 0.62
SCARB1-205ENST00000538291 ATP10BO94823 1461 aa18.9■□□□□ 0.62
SCARB1-205ENST00000538291 SNX16P57768 344 aa18.9■□□□□ 0.62
SCARB1-205ENST00000538291 TIMM10P62072 90 aa18.9■□□□□ 0.62
SCARB1-205ENST00000538291 CCDC169A6NNP5 214 aa18.89■□□□□ 0.62
SCARB1-205ENST00000538291 GUCA1BQ9UMX6 200 aa18.89■□□□□ 0.62
SCARB1-205ENST00000538291 PRAG1Q86YV5 1406 aa18.89■□□□□ 0.61
SCARB1-205ENST00000538291 B4E1Z4 1266 aa18.89■□□□□ 0.61
SCARB1-205ENST00000538291 NOP56O00567 594 aaKnown RBP18.89■□□□□ 0.61
SCARB1-205ENST00000538291 CHMP2AO43633 222 aa18.89■□□□□ 0.61
SCARB1-205ENST00000538291 ARMT1Q9H993 441 aa18.89■□□□□ 0.61
SCARB1-205ENST00000538291 MTRF1LQ9UGC7 380 aaKnown RBP18.89■□□□□ 0.61
SCARB1-205ENST00000538291 KRT5P13647 590 aa18.89■□□□□ 0.61
SCARB1-205ENST00000538291 ZMYM3Q14202 1370 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 GAS8O95995 478 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 TNNI3KQ59H18 835 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 INTS4Q96HW7 963 aaKnown RBP18.88■□□□□ 0.61
SCARB1-205ENST00000538291 CCDC87Q9NVE4 849 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 FPGT-TNNI3KV9GXZ4 949 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 SYCP2Q9BX26 1530 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 HSPA4P34932 840 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 ZBTB16Q05516 673 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 PPP1R7Q15435 360 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 SMC6Q96SB8 1091 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 EXOC7Q9UPT5 735 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 ELP1O95163 1332 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 ATP2C2O75185 946 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 JAKMIP2Q96AA8 810 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 HOXB7P09629 217 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 STRN3Q13033 797 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 CCDC6Q16204 474 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 SPATA24Q86W54 205 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 PLEKHM2Q8IWE5 1019 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 XAGE2Q96GT9 111 aa18.88■□□□□ 0.61
SCARB1-205ENST00000538291 ABCC10Q5T3U5 1492 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 TUBB4BP68371 445 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 CCDC129Q6ZRS4 1044 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 ZNF830Q96NB3 372 aaPredicted RBP18.87■□□□□ 0.61
SCARB1-205ENST00000538291 CALCOCO2Q13137 446 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCARB1-205ENST00000538291 STK24Q9Y6E0 443 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 CNGA4Q8IV77 575 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 APPBP2Q92624 585 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 SLU7O95391 586 aaKnown RBP18.87■□□□□ 0.61
SCARB1-205ENST00000538291 NOLC1Q14978 699 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCARB1-205ENST00000538291 SEL1L2Q5TEA6 688 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 GOLGA1Q92805 767 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 BEGAINQ9BUH8 593 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 ZBTB40Q9NUA8 1239 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 A0A1W2PP64 1363 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 ZBED4O75132 1171 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 TNNC1P63316 161 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 TRPC3Q13507 836 aa18.87■□□□□ 0.61
SCARB1-205ENST00000538291 MCM6Q14566 821 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 ATRIPQ8WXE1 791 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 ARHGEF35A5YM69 484 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 ZYXQ15942 572 aaKnown RBP18.86■□□□□ 0.61
SCARB1-205ENST00000538291 VWA3BQ502W6 1294 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 MAP7D1Q3KQU3 841 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 LEO1Q8WVC0 666 aaPredicted RBP18.86■□□□□ 0.61
SCARB1-205ENST00000538291 CAPZA3Q96KX2 299 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 PDE4DQ08499 809 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 INF2Q27J81 1249 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 CFAP58Q5T655 872 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 CNNM4Q6P4Q7 775 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 CCDC114Q96M63 670 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 PPP1R9BQ96SB3 815 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 PRDM10Q9NQV6 1147 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 IFNKQ9P0W0 207 aa18.86■□□□□ 0.61
SCARB1-205ENST00000538291 MYCLP12524 364 aaPredicted RBP18.85■□□□□ 0.61
SCARB1-205ENST00000538291 TERF1P54274 439 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 TSGA10Q9BZW7 698 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 ODF2LQ9ULJ1 636 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 SLC1A4P43007 532 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 RNF34Q969K3 372 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 PARD3Q8TEW0 1356 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 DYNC1I1O14576 645 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 PIK3AP1Q6ZUJ8 805 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 SELENOSQ9BQE4 189 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 NOC4LQ9BVI4 516 aaKnown RBP18.85■□□□□ 0.61
SCARB1-205ENST00000538291 LPIN2Q92539 896 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 DBNDD2Q9BQY9 259 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 CSRNP2Q9H175 543 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 KAT6BQ8WYB5 2073 aa18.85■□□□□ 0.61
SCARB1-205ENST00000538291 MYL5Q02045 173 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 TRIM6Q9C030 488 aaPredicted RBP18.84■□□□□ 0.61
SCARB1-205ENST00000538291 LZTFL1Q9NQ48 299 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 GINS2Q9Y248 185 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 V9GY48 417 aaPredicted RBP18.84■□□□□ 0.61
SCARB1-205ENST00000538291 SBNO1A3KN83 1393 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 CCNT1O60563 726 aaKnown RBP18.84■□□□□ 0.61
SCARB1-205ENST00000538291 FAM98CQ17RN3 349 aaKnown RBP18.84■□□□□ 0.61
SCARB1-205ENST00000538291 KIFC2Q96AC6 838 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms