RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 SERPINA10Q9UK55 444 aa6.7□□□□□ -1.34
CHD4-205ENST00000536301 PHIPQ8WWQ0 1821 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 CDH23Q9H251 3354 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 APAF1O14727 1248 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 ADCY3O60266 1144 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 TFRCP02786 760 aaKnown RBP6.69□□□□□ -1.34
CHD4-205ENST00000536301 HOXD10P28358 340 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 MAGEA10P43363 369 aaPredicted RBP6.69□□□□□ -1.34
CHD4-205ENST00000536301 FLT3LGP49771 235 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 TRIM32Q13049 653 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 CHAF1AQ13111 956 aaPredicted RBP6.69□□□□□ -1.34
CHD4-205ENST00000536301 CCDC30Q5VVM6 783 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 ANKRD23Q86SG2 305 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.69□□□□□ -1.34
CHD4-205ENST00000536301 FAM84BQ96KN1 310 aaPredicted RBP6.69□□□□□ -1.34
CHD4-205ENST00000536301 GUCD1Q96NT3 240 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 PUS3Q9BZE2 481 aaKnown RBP6.69□□□□□ -1.34
CHD4-205ENST00000536301 CRISPLD2Q9H0B8 497 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 KCNH4Q9UQ05 1017 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 CHMP3Q9Y3E7 222 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 PLXNB2O15031 1838 aa6.69□□□□□ -1.34
CHD4-205ENST00000536301 BMP8BP34820 402 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 TNNI2P48788 182 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 FCGRTP55899 365 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 GNAI1P63096 354 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 PPATQ06203 517 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 NEXNQ0ZGT2 675 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 IFIT5Q13325 482 aaKnown RBP6.68□□□□□ -1.34
CHD4-205ENST00000536301 LRIT3Q3SXY7 679 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 APOBEC3HQ6NTF7 200 aaKnown RBP6.68□□□□□ -1.34
CHD4-205ENST00000536301 LMBR1LQ6UX01 489 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 CCDC84Q86UT8 332 aaPredicted RBP6.68□□□□□ -1.34
CHD4-205ENST00000536301 SLAIN1Q8ND83 568 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 FAM161BQ96MY7 647 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 PAK6Q9NQU5 681 aaPredicted RBP6.68□□□□□ -1.34
CHD4-205ENST00000536301 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.68□□□□□ -1.34
CHD4-205ENST00000536301 RAPGEFL1Q9UHV5 662 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 TAOK2Q9UL54 1235 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 MYO9BQ13459 2157 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 MUC3AQ02505 3323 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 DNAH12Q6ZR08 3092 aa6.68□□□□□ -1.34
CHD4-205ENST00000536301 F6X3S4 739 aa6.67□□□□□ -1.34
CHD4-205ENST00000536301 WDHD1O75717 1129 aaPredicted RBP6.67□□□□□ -1.34
CHD4-205ENST00000536301 HIBADHP31937 336 aaKnown RBP6.67□□□□□ -1.34
CHD4-205ENST00000536301 TCP10Q12799 353 aa6.67□□□□□ -1.34
CHD4-205ENST00000536301 NFIAQ12857 509 aa6.67□□□□□ -1.34
CHD4-205ENST00000536301 FLIIQ13045 1269 aa6.67□□□□□ -1.34
CHD4-205ENST00000536301 GPR153Q6NV75 609 aa6.67□□□□□ -1.34
CHD4-205ENST00000536301 ZFPM1Q8IX07 1006 aa6.67□□□□□ -1.34
CHD4-205ENST00000536301 DNAAF4Q8WXU2 420 aa6.67□□□□□ -1.34
CHD4-205ENST00000536301 ZNF341Q9BYN7 854 aa6.67□□□□□ -1.34
CHD4-205ENST00000536301 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.67□□□□□ -1.34
CHD4-205ENST00000536301 CNNM1Q9NRU3 951 aa6.67□□□□□ -1.34
CHD4-205ENST00000536301 ZNF112Q9UJU3 913 aa6.67□□□□□ -1.34
CHD4-205ENST00000536301 MYH13Q9UKX3 1938 aa6.67□□□□□ -1.34
CHD4-205ENST00000536301 CACNA1FO60840 1977 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 SLC4A2P04920 1241 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 WDR43Q15061 677 aaKnown RBP eCLIP6.66□□□□□ -1.341e-6■□□□□ 9.3
CHD4-205ENST00000536301 LDHAL6AQ6ZMR3 332 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 NECAB2Q7Z6G3 386 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 FBXO33Q7Z6M2 555 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 FAM83AQ86UY5 434 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 TDHQ8IZJ6 230 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 ZDHHC15Q96MV8 337 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 PARK7Q99497 189 aaKnown RBP6.66□□□□□ -1.34
CHD4-205ENST00000536301 PFASO15067 1338 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 RPTORQ8N122 1335 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 MYBBP1AQ9BQG0 1328 aaKnown RBP6.66□□□□□ -1.34
CHD4-205ENST00000536301 DOCK2Q92608 1830 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 ATRNL1Q5VV63 1379 aa6.66□□□□□ -1.34
CHD4-205ENST00000536301 RPAP1Q9BWH6 1393 aaPredicted RBP6.66□□□□□ -1.34
CHD4-205ENST00000536301 NCOR1O75376 2440 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 DOCK1Q14185 1865 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 TNPO2O14787 897 aaKnown RBP6.65□□□□□ -1.34
CHD4-205ENST00000536301 PEX10O60683 326 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 MDM2Q00987 491 aaPredicted RBP6.65□□□□□ -1.34
CHD4-205ENST00000536301 FKBP5Q13451 457 aaPredicted RBP6.65□□□□□ -1.34
CHD4-205ENST00000536301 IRF5Q13568 498 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 UBE4AQ14139 1066 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 RALBP1Q15311 655 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 TWISTNBQ3B726 338 aaPredicted RBP6.65□□□□□ -1.34
CHD4-205ENST00000536301 LRRC24Q50LG9 513 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 NOL9Q5SY16 702 aaKnown RBP6.65□□□□□ -1.34
CHD4-205ENST00000536301 DCAF15Q66K64 600 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 GADL1Q6ZQY3 521 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 LINS1Q8NG48 757 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 PXYLP1Q8TE99 480 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 TEKT1Q969V4 418 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 KAZALD1Q96I82 304 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 STK31Q9BXU1 1019 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 UBE2OQ9C0C9 1292 aaKnown RBP6.65□□□□□ -1.34
CHD4-205ENST00000536301 MYH16Q9H6N6 1097 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 PRDM6Q9NQX0 595 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 FAM198AQ9UFP1 575 aa6.65□□□□□ -1.34
CHD4-205ENST00000536301 COL2A1P02458 1487 aaPredicted RBP6.65□□□□□ -1.35
CHD4-205ENST00000536301 FRMPD3Q5JV73 1810 aa6.64□□□□□ -1.35
CHD4-205ENST00000536301 A0A0G2JLL6 359 aaPredicted RBP6.64□□□□□ -1.35
CHD4-205ENST00000536301 PHF20L1A8MW92 1017 aa6.64□□□□□ -1.35
CHD4-205ENST00000536301 POTEB2H3BUK9 544 aa6.64□□□□□ -1.35
CHD4-205ENST00000536301 HDLBPQ00341 1268 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms