RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 MVPQ14764 893 aaKnown RBP20.03■□□□□ 0.8
CLSTN3-204ENST00000535313 CDC42EP5Q6NZY7 148 aa20.03■□□□□ 0.8
CLSTN3-204ENST00000535313 XAGE2Q96GT9 111 aa20.03■□□□□ 0.8
CLSTN3-204ENST00000535313 WRNIP1Q96S55 665 aa20.03■□□□□ 0.8
CLSTN3-204ENST00000535313 RPAP1Q9BWH6 1393 aaPredicted RBP20.03■□□□□ 0.8
CLSTN3-204ENST00000535313 OTOFQ9HC10 1997 aa20.03■□□□□ 0.8
CLSTN3-204ENST00000535313 TESPA1A2RU30 521 aaPredicted RBP20.02■□□□□ 0.8
CLSTN3-204ENST00000535313 GTF2A2P52657 109 aa20.02■□□□□ 0.8
CLSTN3-204ENST00000535313 TMEM57Q8N5G2 664 aa20.02■□□□□ 0.8
CLSTN3-204ENST00000535313 FAM151AQ8WW52 585 aa20.02■□□□□ 0.8
CLSTN3-204ENST00000535313 CNKSR2Q8WXI2 1034 aa20.02■□□□□ 0.8
CLSTN3-204ENST00000535313 OTUD5Q96G74 571 aa20.02■□□□□ 0.8
CLSTN3-204ENST00000535313 HPS5Q9UPZ3 1129 aa20.02■□□□□ 0.8
CLSTN3-204ENST00000535313 PDS5AQ29RF7 1337 aaKnown RBP20.02■□□□□ 0.79
CLSTN3-204ENST00000535313 G3BP1Q13283 466 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLSTN3-204ENST00000535313 RASGRF1Q13972 1273 aa20.01■□□□□ 0.79
CLSTN3-204ENST00000535313 DZIP1Q86YF9 867 aaKnown RBP20.01■□□□□ 0.79
CLSTN3-204ENST00000535313 FTSJ3Q8IY81 847 aaKnown RBP20.01■□□□□ 0.79
CLSTN3-204ENST00000535313 MS4A4AQ96JQ5 239 aa20.01■□□□□ 0.79
CLSTN3-204ENST00000535313 NEUROD6Q96NK8 337 aa20.01■□□□□ 0.79
CLSTN3-204ENST00000535313 PTPN18Q99952 460 aa20.01■□□□□ 0.79
CLSTN3-204ENST00000535313 ZNF341Q9BYN7 854 aa20.01■□□□□ 0.79
CLSTN3-204ENST00000535313 USP40Q9NVE5 1235 aa20.01■□□□□ 0.79
CLSTN3-204ENST00000535313 ABCF2Q9UG63 623 aa20.01■□□□□ 0.79
CLSTN3-204ENST00000535313 LAMB1P07942 1786 aa20■□□□□ 0.79
CLSTN3-204ENST00000535313 SPDYE5A6NIY4 337 aa20■□□□□ 0.79
CLSTN3-204ENST00000535313 TCP10Q12799 353 aa20■□□□□ 0.79
CLSTN3-204ENST00000535313 CRHR2Q13324 411 aa20■□□□□ 0.79
CLSTN3-204ENST00000535313 GORABQ5T7V8 394 aa20■□□□□ 0.79
CLSTN3-204ENST00000535313 SPTY2D1Q68D10 685 aaPredicted RBP20■□□□□ 0.79
CLSTN3-204ENST00000535313 FBXO46Q6PJ61 603 aaPredicted RBP20■□□□□ 0.79
CLSTN3-204ENST00000535313 MIGA2Q7L4E1 593 aa20■□□□□ 0.79
CLSTN3-204ENST00000535313 ERO1BQ86YB8 467 aa20■□□□□ 0.79
CLSTN3-204ENST00000535313 SLF2Q8IX21 1173 aa20■□□□□ 0.79
CLSTN3-204ENST00000535313 CCL15-CCL14A0A0B4J2E2 113 aa19.99■□□□□ 0.79
CLSTN3-204ENST00000535313 PNMA6EA0A0J9YXQ4 647 aa19.99■□□□□ 0.79
CLSTN3-204ENST00000535313 SOX10P56693 466 aa19.99■□□□□ 0.79
CLSTN3-204ENST00000535313 NFIAQ12857 509 aa19.99■□□□□ 0.79
CLSTN3-204ENST00000535313 CCL15Q16663 113 aa19.99■□□□□ 0.79
CLSTN3-204ENST00000535313 ZKSCAN4Q969J2 545 aaPredicted RBP19.99■□□□□ 0.79
CLSTN3-204ENST00000535313 SNCAIPQ9Y6H5 919 aa19.99■□□□□ 0.79
CLSTN3-204ENST00000535313 BRI3BPQ8WY22 251 aa19.98■□□□□ 0.79
CLSTN3-204ENST00000535313 ERO1AQ96HE7 468 aa19.98■□□□□ 0.79
CLSTN3-204ENST00000535313 CETPP11597 493 aa19.97■□□□□ 0.79
CLSTN3-204ENST00000535313 ERICH6Q7L0X2 663 aa19.97■□□□□ 0.79
CLSTN3-204ENST00000535313 FAM198AQ9UFP1 575 aa19.97■□□□□ 0.79
CLSTN3-204ENST00000535313 TRIM17Q9Y577 477 aa19.97■□□□□ 0.79
CLSTN3-204ENST00000535313 GAKO14976 1311 aa19.97■□□□□ 0.79
CLSTN3-204ENST00000535313 WDHD1O75717 1129 aaPredicted RBP19.96■□□□□ 0.79
CLSTN3-204ENST00000535313 PPIL2Q13356 520 aa19.96■□□□□ 0.79
CLSTN3-204ENST00000535313 SNAPC2Q13487 334 aa19.96■□□□□ 0.79
CLSTN3-204ENST00000535313 TAF1CQ15572 869 aaPredicted RBP19.96■□□□□ 0.79
CLSTN3-204ENST00000535313 ITPRIPQ8IWB1 547 aa19.96■□□□□ 0.79
CLSTN3-204ENST00000535313 ZFYVE28Q9HCC9 887 aa19.96■□□□□ 0.79
CLSTN3-204ENST00000535313 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.96■□□□□ 0.79
CLSTN3-204ENST00000535313 INPP5BP32019 993 aa19.95■□□□□ 0.78
CLSTN3-204ENST00000535313 SP3Q02447 781 aa19.95■□□□□ 0.78
CLSTN3-204ENST00000535313 OS9Q13438 667 aaPredicted RBP19.95■□□□□ 0.78
CLSTN3-204ENST00000535313 SPATA5Q8NB90 893 aa19.95■□□□□ 0.78
CLSTN3-204ENST00000535313 FAM163AQ96GL9 167 aaPredicted RBP19.95■□□□□ 0.78
CLSTN3-204ENST00000535313 IDI2Q9BXS1 227 aa19.95■□□□□ 0.78
CLSTN3-204ENST00000535313 ZBED9Q6R2W3 1325 aa19.95■□□□□ 0.78
CLSTN3-204ENST00000535313 AK9Q5TCS8 1911 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 MYH2Q9UKX2 1941 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 IRF6O14896 467 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 ENTPD3O75355 529 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 RGS3P49796 1198 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 ATP8B2P98198 1209 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 PPATQ06203 517 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 POLA2Q14181 598 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 OTOP1Q7RTM1 612 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 CD99L2Q8TCZ2 262 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 HMG20BQ9P0W2 317 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 ZNF112Q9UJU3 913 aa19.94■□□□□ 0.78
CLSTN3-204ENST00000535313 UQCRFS1P1P0C7P4 283 aa19.93■□□□□ 0.78
CLSTN3-204ENST00000535313 ARID4AP29374 1257 aaPredicted RBP19.93■□□□□ 0.78
CLSTN3-204ENST00000535313 BTDP43251 543 aa19.93■□□□□ 0.78
CLSTN3-204ENST00000535313 GSTO1P78417 241 aa19.93■□□□□ 0.78
CLSTN3-204ENST00000535313 ZSCAN29Q8IWY8 852 aaPredicted RBP19.93■□□□□ 0.78
CLSTN3-204ENST00000535313 ZFPM1Q8IX07 1006 aa19.93■□□□□ 0.78
CLSTN3-204ENST00000535313 FAM43AQ8N2R8 423 aa19.93■□□□□ 0.78
CLSTN3-204ENST00000535313 SSH3Q8TE77 659 aa19.93■□□□□ 0.78
CLSTN3-204ENST00000535313 C1orf115Q9H7X2 142 aa19.93■□□□□ 0.78
CLSTN3-204ENST00000535313 MROH7-TTC4A0A0A0MT08 1334 aa19.93■□□□□ 0.78
CLSTN3-204ENST00000535313 SURF6O75683 361 aaKnown RBP19.92■□□□□ 0.78
CLSTN3-204ENST00000535313 LDHCP07864 332 aa19.92■□□□□ 0.78
CLSTN3-204ENST00000535313 MECOMQ03112 1051 aa19.92■□□□□ 0.78
CLSTN3-204ENST00000535313 EFCC1Q9HA90 598 aa19.92■□□□□ 0.78
CLSTN3-204ENST00000535313 ZCCHC17Q9NP64 241 aaKnown RBP19.92■□□□□ 0.78
CLSTN3-204ENST00000535313 BTBD19C9JJ37 291 aa19.91■□□□□ 0.78
CLSTN3-204ENST00000535313 RLBP1P12271 317 aa19.91■□□□□ 0.78
CLSTN3-204ENST00000535313 ARHGEF6Q15052 776 aa19.91■□□□□ 0.78
CLSTN3-204ENST00000535313 NOL9Q5SY16 702 aaKnown RBP19.91■□□□□ 0.78
CLSTN3-204ENST00000535313 PI16Q6UXB8 463 aa19.91■□□□□ 0.78
CLSTN3-204ENST00000535313 GPR108Q9NPR9 543 aa19.91■□□□□ 0.78
CLSTN3-204ENST00000535313 RAI14Q9P0K7 980 aa19.91■□□□□ 0.78
CLSTN3-204ENST00000535313 GPR75-ASB3A0A0A6YYF3 556 aa19.9■□□□□ 0.78
CLSTN3-204ENST00000535313 ZBTB7BO15156 539 aaPredicted RBP19.9■□□□□ 0.78
CLSTN3-204ENST00000535313 PICALMQ13492 652 aa19.9■□□□□ 0.78
CLSTN3-204ENST00000535313 TNNI3KQ59H18 835 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms