RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 TAF12Q16514 161 aa9.14□□□□□ -0.95
CTNND1-234ENST00000532844 SYT10Q6XYQ8 523 aa9.14□□□□□ -0.95
CTNND1-234ENST00000532844 ZKSCAN3Q9BRR0 538 aa9.14□□□□□ -0.95
CTNND1-234ENST00000532844 SELENOOQ9BVL4 669 aa9.14□□□□□ -0.95
CTNND1-234ENST00000532844 HMGB1P1B2RPK0 211 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-234ENST00000532844 NDC80O14777 642 aa9.14□□□□□ -0.95
CTNND1-234ENST00000532844 CAPZA3Q96KX2 299 aa9.14□□□□□ -0.95
CTNND1-234ENST00000532844 LZTFL1Q9NQ48 299 aa9.14□□□□□ -0.95
CTNND1-234ENST00000532844 A0A1B0GVL5 298 aa9.14□□□□□ -0.95
CTNND1-234ENST00000532844 KRT13P13646 458 aa9.14□□□□□ -0.95
CTNND1-234ENST00000532844 IP6K1Q92551 441 aa9.14□□□□□ -0.95
CTNND1-234ENST00000532844 MCM9Q9NXL9 1143 aa9.14□□□□□ -0.95
CTNND1-234ENST00000532844 EDC4Q6P2E9 1401 aaKnown RBP9.13□□□□□ -0.95
CTNND1-234ENST00000532844 BICDL2A1A5D9 508 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 MGEA5O60502 916 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 ARID5AQ03989 594 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 LRRC45Q96CN5 670 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 ELP1O95163 1332 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 NPC1L1Q9UHC9 1359 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 SMARCC2Q8TAQ2 1214 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 SEPT8Q92599 483 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 NYXQ9GZU5 481 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 TNNI3KQ59H18 835 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 ZNF569Q5MCW4 686 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 PLIN2Q99541 437 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 GUCA1BQ9UMX6 200 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 USH1CQ9Y6N9 552 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 FPGT-TNNI3KV9GXZ4 949 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 AOX1Q06278 1338 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 PCDH11XQ9BZA7 1347 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 PCDH11YQ9BZA8 1340 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 KRT86O43790 486 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 TOM1O60784 492 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 GCP02774 474 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 ATL3Q6DD88 541 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 CPLX4Q7Z7G2 160 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 NBPF11Q86T75 865 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 ARFGAP2Q8N6H7 521 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.13□□□□□ -0.956e-14■□□□□ 9.9
CTNND1-234ENST00000532844 PPP1R12CQ9BZL4 782 aa9.13□□□□□ -0.95
CTNND1-234ENST00000532844 TSPYL2Q9H2G4 693 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-234ENST00000532844 RRAGDQ9NQL2 400 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-234ENST00000532844 MBD4O95243 580 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 MAP7Q14244 749 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 FAM160A1Q05DH4 1040 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 KIF5AQ12840 1032 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 KRT79Q5XKE5 535 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 DDX21Q9NR30 783 aaKnown RBP eCLIP9.12□□□□□ -0.954e-6■□□□□ 11.2
CTNND1-234ENST00000532844 RASAL2Q9UJF2 1139 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 MRVI1Q9Y6F6 885 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 CIB2O75838 187 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 ERCC3P19447 782 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 ARL1P40616 181 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-234ENST00000532844 SH2D4BQ5SQS7 431 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 EP400NLQ6ZTU2 488 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 SBNO1A3KN83 1393 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 KDM5AP29375 1690 aaKnown RBP9.12□□□□□ -0.95
CTNND1-234ENST00000532844 ADGRL2O95490 1459 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 GMNNO75496 209 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 TNNI2P48788 182 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 ATP11AP98196 1134 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 CTNND2Q9UQB3 1225 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 USP19O94966 1318 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 RNF123Q5XPI4 1314 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 TMEM110-MUSTN1A8MSY1 372 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 PPFIA2O75334 1257 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 PRR16Q569H4 304 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 DTHD1Q6ZMT9 781 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 NEK11Q8NG66 645 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 CCDC42Q96M95 316 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 PLVAPQ9BX97 442 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 VCXQ9H320 206 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 SAMD15Q9P1V8 674 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 PBRM1Q86U86 1689 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 ADGBQ8N7X0 1667 aa9.12□□□□□ -0.95
CTNND1-234ENST00000532844 ZNF174Q15697 407 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 DDB1Q16531 1140 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 SMC1BQ8NDV3 1235 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 FAM227BQ96M60 508 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 METTL22Q9BUU2 404 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-234ENST00000532844 SH3BGRP55822 239 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-234ENST00000532844 MYL5Q02045 173 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 KLHDC4Q8TBB5 520 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 IFT74Q96LB3 600 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 HDAC9Q9UKV0 1011 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 VWA3AA6NCI4 1184 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 B4E1Z4 1266 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 FMNL3Q8IVF7 1028 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 CCDC117Q8IWD4 279 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-234ENST00000532844 PLBD2Q8NHP8 589 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 CCDC94Q9BW85 323 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-234ENST00000532844 JAG2Q9Y219 1238 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 RHOXF2BP0C7M4 288 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 WHAMMP3Q1A5X7 153 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 TSNAXIP1Q2TAA8 658 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 RHOXF2Q9BQY4 288 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 TIMM10P62072 90 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 TRAF1Q13077 416 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 NEDD9Q14511 834 aa9.11□□□□□ -0.95
CTNND1-234ENST00000532844 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms