RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 RPAP1Q9BWH6 1393 aaPredicted RBP21.73■■□□□ 1.07
PKP3-208ENST00000531857 ECM2O94769 699 aaPredicted RBP21.72■■□□□ 1.07
PKP3-208ENST00000531857 IFIT1P09914 478 aaKnown RBP21.72■■□□□ 1.07
PKP3-208ENST00000531857 INPP5BP32019 993 aa21.72■■□□□ 1.07
PKP3-208ENST00000531857 SLC4A8Q2Y0W8 1093 aa21.72■■□□□ 1.07
PKP3-208ENST00000531857 HOOK2Q96ED9 719 aa21.72■■□□□ 1.07
PKP3-208ENST00000531857 KIF16BQ96L93 1317 aa21.72■■□□□ 1.07
PKP3-208ENST00000531857 MGAMO43451 1857 aa21.71■■□□□ 1.07
PKP3-208ENST00000531857 WDHD1O75717 1129 aaPredicted RBP21.71■■□□□ 1.07
PKP3-208ENST00000531857 RFX5P48382 616 aaPredicted RBP21.71■■□□□ 1.07
PKP3-208ENST00000531857 DCAF15Q66K64 600 aa21.71■■□□□ 1.07
PKP3-208ENST00000531857 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.71■■□□□ 1.07
PKP3-208ENST00000531857 ZNF341Q9BYN7 854 aa21.71■■□□□ 1.07
PKP3-208ENST00000531857 PTPRCP08575 1304 aa21.71■■□□□ 1.07
PKP3-208ENST00000531857 CTGFP29279 349 aa21.7■■□□□ 1.06
PKP3-208ENST00000531857 PPATQ06203 517 aa21.7■■□□□ 1.06
PKP3-208ENST00000531857 KIF22Q14807 665 aa21.7■■□□□ 1.06
PKP3-208ENST00000531857 MYH2Q9UKX2 1941 aa21.7■■□□□ 1.06
PKP3-208ENST00000531857 EYA2O00167 538 aa21.69■■□□□ 1.06
PKP3-208ENST00000531857 TCP10Q12799 353 aa21.69■■□□□ 1.06
PKP3-208ENST00000531857 C17orf99Q6UX52 265 aa21.69■■□□□ 1.06
PKP3-208ENST00000531857 FAM151AQ8WW52 585 aa21.69■■□□□ 1.06
PKP3-208ENST00000531857 SSH1Q8WYL5 1049 aa21.69■■□□□ 1.06
PKP3-208ENST00000531857 CPA4Q9UI42 421 aa21.69■■□□□ 1.06
PKP3-208ENST00000531857 DAGLAQ9Y4D2 1042 aa21.69■■□□□ 1.06
PKP3-208ENST00000531857 CEP290O15078 2479 aa21.69■■□□□ 1.06
PKP3-208ENST00000531857 DOCK2Q92608 1830 aa21.69■■□□□ 1.06
PKP3-208ENST00000531857 DIXDC1Q155Q3 683 aa21.68■■□□□ 1.06
PKP3-208ENST00000531857 CDC42EP5Q6NZY7 148 aa21.68■■□□□ 1.06
PKP3-208ENST00000531857 ATG9AQ7Z3C6 839 aa21.68■■□□□ 1.06
PKP3-208ENST00000531857 WDR66Q8TBY9 1149 aa21.68■■□□□ 1.06
PKP3-208ENST00000531857 SLC5A1P13866 664 aa21.67■■□□□ 1.06
PKP3-208ENST00000531857 FXR1P51114 621 aaKnown RBP eCLIP21.67■■□□□ 1.06
PKP3-208ENST00000531857 NFIAQ12857 509 aa21.67■■□□□ 1.06
PKP3-208ENST00000531857 LPIN2Q92539 896 aa21.67■■□□□ 1.06
PKP3-208ENST00000531857 ZNF112Q9UJU3 913 aa21.67■■□□□ 1.06
PKP3-208ENST00000531857 COLQQ9Y215 455 aaPredicted RBP21.67■■□□□ 1.06
PKP3-208ENST00000531857 ADGRA2Q96PE1 1338 aa21.66■■□□□ 1.06
PKP3-208ENST00000531857 PDHXO00330 501 aa21.66■■□□□ 1.06
PKP3-208ENST00000531857 GNRH1P01148 92 aa21.66■■□□□ 1.06
PKP3-208ENST00000531857 PRDX5P30044 214 aa21.66■■□□□ 1.06
PKP3-208ENST00000531857 MOGSQ13724 837 aa21.66■■□□□ 1.06
PKP3-208ENST00000531857 ANKRD23Q86SG2 305 aa21.66■■□□□ 1.06
PKP3-208ENST00000531857 TRIM47Q96LD4 638 aa21.66■■□□□ 1.06
PKP3-208ENST00000531857 KCNH4Q9UQ05 1017 aa21.66■■□□□ 1.06
PKP3-208ENST00000531857 PTPRFP10586 1907 aa21.65■■□□□ 1.06
PKP3-208ENST00000531857 PSMC4P43686 418 aa21.65■■□□□ 1.06
PKP3-208ENST00000531857 MTFR1Q15390 333 aa21.65■■□□□ 1.06
PKP3-208ENST00000531857 FAM198AQ9UFP1 575 aa21.65■■□□□ 1.06
PKP3-208ENST00000531857 PRMT2P55345 433 aa21.64■■□□□ 1.05
PKP3-208ENST00000531857 ZFPM1Q8IX07 1006 aa21.64■■□□□ 1.05
PKP3-208ENST00000531857 SIL1Q9H173 461 aa21.64■■□□□ 1.05
PKP3-208ENST00000531857 SRRDQ9UH36 339 aa21.64■■□□□ 1.05
PKP3-208ENST00000531857 H0YGN5 161 aa21.63■■□□□ 1.05
PKP3-208ENST00000531857 OSBPP22059 807 aa21.63■■□□□ 1.05
PKP3-208ENST00000531857 SHISA4Q96DD7 197 aa21.63■■□□□ 1.05
PKP3-208ENST00000531857 USP40Q9NVE5 1235 aa21.63■■□□□ 1.05
PKP3-208ENST00000531857 PHIPQ8WWQ0 1821 aa21.63■■□□□ 1.05
PKP3-208ENST00000531857 LDHBP07195 334 aaKnown RBP21.62■■□□□ 1.05
PKP3-208ENST00000531857 ATP2B3Q16720 1220 aa21.62■■□□□ 1.05
PKP3-208ENST00000531857 NOL9Q5SY16 702 aaKnown RBP21.62■■□□□ 1.05
PKP3-208ENST00000531857 FMNL1O95466 1100 aaPredicted RBP21.61■■□□□ 1.05
PKP3-208ENST00000531857 DOCK1Q14185 1865 aa21.6■■□□□ 1.05
PKP3-208ENST00000531857 TRIOBPQ9H2D6 2365 aa21.6■■□□□ 1.05
PKP3-208ENST00000531857 E9PSI1 815 aa21.6■■□□□ 1.05
PKP3-208ENST00000531857 PHKA1P46020 1223 aa21.6■■□□□ 1.05
PKP3-208ENST00000531857 GPAT2Q6NUI2 795 aa21.6■■□□□ 1.05
PKP3-208ENST00000531857 ATRNL1Q5VV63 1379 aa21.6■■□□□ 1.05
PKP3-208ENST00000531857 MYPNQ86TC9 1320 aa21.59■■□□□ 1.05
PKP3-208ENST00000531857 SALL1Q9NSC2 1324 aa21.59■■□□□ 1.05
PKP3-208ENST00000531857 PHF20L1A8MW92 1017 aa21.59■■□□□ 1.05
PKP3-208ENST00000531857 CIAO1O76071 339 aa21.59■■□□□ 1.05
PKP3-208ENST00000531857 CYP2C8P10632 490 aa21.59■■□□□ 1.05
PKP3-208ENST00000531857 GRK4P32298 578 aa21.59■■□□□ 1.05
PKP3-208ENST00000531857 SLFN5Q08AF3 891 aa21.59■■□□□ 1.05
PKP3-208ENST00000531857 RAET1EQ8TD07 263 aa21.59■■□□□ 1.05
PKP3-208ENST00000531857 CEP126Q9P2H0 1117 aa21.59■■□□□ 1.05
PKP3-208ENST00000531857 CENPBP07199 599 aaPredicted RBP21.58■■□□□ 1.05
PKP3-208ENST00000531857 HOXD10P28358 340 aa21.58■■□□□ 1.05
PKP3-208ENST00000531857 MIER1Q8N108 512 aa21.58■■□□□ 1.05
PKP3-208ENST00000531857 GNL3LQ9NVN8 582 aaKnown RBP21.58■■□□□ 1.05
PKP3-208ENST00000531857 FBXO3Q9UK99 471 aa21.58■■□□□ 1.05
PKP3-208ENST00000531857 DOCK3Q8IZD9 2030 aa21.58■■□□□ 1.04
PKP3-208ENST00000531857 CXCL11O14625 94 aa21.57■■□□□ 1.04
PKP3-208ENST00000531857 UBTFL1P0CB47 393 aaPredicted RBP21.57■■□□□ 1.04
PKP3-208ENST00000531857 SLURP2P0DP57 97 aa21.57■■□□□ 1.04
PKP3-208ENST00000531857 BCRP11274 1271 aa21.57■■□□□ 1.04
PKP3-208ENST00000531857 ADORA1P30542 326 aa21.57■■□□□ 1.04
PKP3-208ENST00000531857 RGS3P49796 1198 aa21.57■■□□□ 1.04
PKP3-208ENST00000531857 ALDH1L2Q3SY69 923 aa21.57■■□□□ 1.04
PKP3-208ENST00000531857 SH3BP5LQ7L8J4 393 aa21.57■■□□□ 1.04
PKP3-208ENST00000531857 CDCA7LQ96GN5 454 aa21.57■■□□□ 1.04
PKP3-208ENST00000531857 PARK7Q99497 189 aaKnown RBP21.57■■□□□ 1.04
PKP3-208ENST00000531857 SMC4Q9NTJ3 1288 aa21.57■■□□□ 1.04
PKP3-208ENST00000531857 DENND2AQ9ULE3 1009 aa21.57■■□□□ 1.04
PKP3-208ENST00000531857 PA2G4Q9UQ80 394 aaKnown RBP21.57■■□□□ 1.04
PKP3-208ENST00000531857 SEMA3EO15041 775 aa21.56■■□□□ 1.04
PKP3-208ENST00000531857 CCL5P13501 91 aa21.56■■□□□ 1.04
PKP3-208ENST00000531857 PRKCZQ05513 592 aa21.56■■□□□ 1.04
PKP3-208ENST00000531857 SCYL3Q8IZE3 742 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms