RNA–Protein interactions for RNA: ENST00000531184.5

GSDMD-211, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,213 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-211ENST00000531184 SBF2Q86WG5 1849 aa23.79■■□□□ 1.4
GSDMD-211ENST00000531184 CEMIPQ8WUJ3 1361 aa23.79■■□□□ 1.4
GSDMD-211ENST00000531184 ELF1P32519 619 aa23.79■■□□□ 1.4
GSDMD-211ENST00000531184 KCNB2Q92953 911 aa23.79■■□□□ 1.4
GSDMD-211ENST00000531184 JAKMIP1Q96N16 626 aaKnown RBP23.79■■□□□ 1.4
GSDMD-211ENST00000531184 PLEKHA4Q9H4M7 779 aa23.79■■□□□ 1.4
GSDMD-211ENST00000531184 ANKZF1Q9H8Y5 726 aa23.79■■□□□ 1.4
GSDMD-211ENST00000531184 SLC52A2Q9HAB3 445 aa23.79■■□□□ 1.4
GSDMD-211ENST00000531184 TMOD3Q9NYL9 352 aa23.79■■□□□ 1.4
GSDMD-211ENST00000531184 GPTP24298 496 aa23.78■■□□□ 1.4
GSDMD-211ENST00000531184 PRPF38AQ8NAV1 312 aaKnown RBP23.78■■□□□ 1.4
GSDMD-211ENST00000531184 CFAP45Q9UL16 551 aa23.78■■□□□ 1.4
GSDMD-211ENST00000531184 KLHL33A6NCF5 533 aa23.78■■□□□ 1.4
GSDMD-211ENST00000531184 TEFQ10587 303 aa23.78■■□□□ 1.4
GSDMD-211ENST00000531184 FBXW10Q5XX13 1052 aa23.78■■□□□ 1.4
GSDMD-211ENST00000531184 KIFC2Q96AC6 838 aa23.78■■□□□ 1.4
GSDMD-211ENST00000531184 SCN11AQ9UI33 1791 aa23.77■■□□□ 1.4
GSDMD-211ENST00000531184 GNG11P61952 73 aa23.77■■□□□ 1.4
GSDMD-211ENST00000531184 WDR24Q96S15 920 aa23.77■■□□□ 1.4
GSDMD-211ENST00000531184 MCM8Q9UJA3 840 aa23.77■■□□□ 1.4
GSDMD-211ENST00000531184 AFAP1L1Q8TED9 768 aa23.76■■□□□ 1.39
GSDMD-211ENST00000531184 CCDC102AQ96A19 550 aa23.76■■□□□ 1.39
GSDMD-211ENST00000531184 TPCN1Q9ULQ1 816 aa23.76■■□□□ 1.39
GSDMD-211ENST00000531184 PPP2R2CQ9Y2T4 447 aa23.76■■□□□ 1.39
GSDMD-211ENST00000531184 CHMP4BP1P59074 171 aa23.76■■□□□ 1.39
GSDMD-211ENST00000531184 IRX1P78414 480 aaPredicted RBP23.76■■□□□ 1.39
GSDMD-211ENST00000531184 SCRN1Q12765 414 aa23.76■■□□□ 1.39
GSDMD-211ENST00000531184 SRGAP1Q7Z6B7 1085 aa23.76■■□□□ 1.39
GSDMD-211ENST00000531184 GBP3Q9H0R5 595 aa23.76■■□□□ 1.39
GSDMD-211ENST00000531184 KINO60870 393 aaKnown RBP23.75■■□□□ 1.39
GSDMD-211ENST00000531184 GNAI2P04899 355 aa23.75■■□□□ 1.39
GSDMD-211ENST00000531184 CASP8Q14790 479 aa23.75■■□□□ 1.39
GSDMD-211ENST00000531184 JPH2Q9BR39 696 aaPredicted RBP23.75■■□□□ 1.39
GSDMD-211ENST00000531184 FAM169AQ9Y6X4 670 aa23.75■■□□□ 1.39
GSDMD-211ENST00000531184 ITGB4P16144 1822 aa23.75■■□□□ 1.39
GSDMD-211ENST00000531184 BIRC2Q13490 618 aa23.75■■□□□ 1.39
GSDMD-211ENST00000531184 CPLX2Q6PUV4 134 aaKnown RBP23.75■■□□□ 1.39
GSDMD-211ENST00000531184 CCAR1Q8IX12 1150 aaKnown RBP23.75■■□□□ 1.39
GSDMD-211ENST00000531184 CABS1Q96KC9 395 aa23.75■■□□□ 1.39
GSDMD-211ENST00000531184 ABCB6Q9NP58 842 aa23.75■■□□□ 1.39
GSDMD-211ENST00000531184 MIS18AQ9NYP9 233 aa23.75■■□□□ 1.39
GSDMD-211ENST00000531184 ASAP1Q9ULH1 1129 aa23.75■■□□□ 1.39
GSDMD-211ENST00000531184 ADAMTS7Q9UKP4 1686 aa23.75■■□□□ 1.39
GSDMD-211ENST00000531184 ARHGAP6O43182 974 aa23.74■■□□□ 1.39
GSDMD-211ENST00000531184 APBA3O96018 575 aa23.74■■□□□ 1.39
GSDMD-211ENST00000531184 CCDC73Q6ZRK6 1079 aa23.74■■□□□ 1.39
GSDMD-211ENST00000531184 UPF1Q92900 1129 aaKnown RBP eCLIP23.74■■□□□ 1.39
GSDMD-211ENST00000531184 DHX58Q96C10 678 aa23.74■■□□□ 1.39
GSDMD-211ENST00000531184 BSDC1Q9NW68 430 aaPredicted RBP23.74■■□□□ 1.39
GSDMD-211ENST00000531184 SHOX2O60902 331 aaPredicted RBP23.74■■□□□ 1.39
GSDMD-211ENST00000531184 RESTQ13127 1097 aa23.74■■□□□ 1.39
GSDMD-211ENST00000531184 SLC39A6Q13433 755 aa23.74■■□□□ 1.39
GSDMD-211ENST00000531184 ADCK5Q3MIX3 580 aa23.74■■□□□ 1.39
GSDMD-211ENST00000531184 VEZTQ9HBM0 779 aa23.74■■□□□ 1.39
GSDMD-211ENST00000531184 EBAG9O00559 213 aa23.73■■□□□ 1.39
GSDMD-211ENST00000531184 GCFC2P16383 781 aaKnown RBP23.73■■□□□ 1.39
GSDMD-211ENST00000531184 FMNL3Q8IVF7 1028 aa23.73■■□□□ 1.39
GSDMD-211ENST00000531184 NHSQ6T4R5 1651 aa23.73■■□□□ 1.39
GSDMD-211ENST00000531184 TMCO5BA8MYB1 307 aa23.72■■□□□ 1.39
GSDMD-211ENST00000531184 TUBBP07437 444 aa23.72■■□□□ 1.39
GSDMD-211ENST00000531184 CCT4P50991 539 aaKnown RBP23.72■■□□□ 1.39
GSDMD-211ENST00000531184 TEX11Q8IYF3 940 aa23.72■■□□□ 1.39
GSDMD-211ENST00000531184 ENGASEQ8NFI3 743 aa23.72■■□□□ 1.39
GSDMD-211ENST00000531184 H0YHG0 523 aa23.72■■□□□ 1.39
GSDMD-211ENST00000531184 AARSP49588 968 aaKnown RBP eCLIP23.72■■□□□ 1.39
GSDMD-211ENST00000531184 SARNPP82979 210 aaKnown RBP23.72■■□□□ 1.39
GSDMD-211ENST00000531184 FAM160A1Q05DH4 1040 aa23.72■■□□□ 1.39
GSDMD-211ENST00000531184 CEP112Q8N8E3 955 aa23.72■■□□□ 1.39
GSDMD-211ENST00000531184 CLIC6Q96NY7 704 aa23.72■■□□□ 1.39
GSDMD-211ENST00000531184 PNKPQ96T60 521 aa23.72■■□□□ 1.39
GSDMD-211ENST00000531184 GOLPH3LQ9H4A5 285 aa23.72■■□□□ 1.39
GSDMD-211ENST00000531184 VIPAS39Q9H9C1 493 aa23.72■■□□□ 1.39
GSDMD-211ENST00000531184 A0A087WWV3 80 aa23.71■■□□□ 1.39
GSDMD-211ENST00000531184 CUTAO60888 179 aa23.71■■□□□ 1.39
GSDMD-211ENST00000531184 INPP5BP32019 993 aa23.71■■□□□ 1.39
GSDMD-211ENST00000531184 ATXN2Q99700 1313 aaKnown RBP23.71■■□□□ 1.39
GSDMD-211ENST00000531184 RNF40O75150 1001 aa23.71■■□□□ 1.39
GSDMD-211ENST00000531184 NBPF10Q6P3W6 841 aaKnown RBP23.71■■□□□ 1.39
GSDMD-211ENST00000531184 FAM177A1Q8N128 213 aaPredicted RBP23.71■■□□□ 1.39
GSDMD-211ENST00000531184 MRC1P22897 1456 aa23.7■■□□□ 1.38
GSDMD-211ENST00000531184 PHACTR2O75167 634 aa23.7■■□□□ 1.38
GSDMD-211ENST00000531184 TAF7Q15545 349 aaPredicted RBP23.7■■□□□ 1.38
GSDMD-211ENST00000531184 DEFB132Q7Z7B7 95 aa23.7■■□□□ 1.38
GSDMD-211ENST00000531184 CTCFLQ8NI51 663 aaPredicted RBP23.7■■□□□ 1.38
GSDMD-211ENST00000531184 BTBD11A6QL63 1104 aa23.69■■□□□ 1.38
GSDMD-211ENST00000531184 PRPF6O94906 941 aaKnown RBP23.69■■□□□ 1.38
GSDMD-211ENST00000531184 PREPLQ4J6C6 727 aaPredicted RBP23.69■■□□□ 1.38
GSDMD-211ENST00000531184 CNTROBQ8N137 903 aa23.69■■□□□ 1.38
GSDMD-211ENST00000531184 BTAF1O14981 1849 aa23.69■■□□□ 1.38
GSDMD-211ENST00000531184 CHUKO15111 745 aa23.69■■□□□ 1.38
GSDMD-211ENST00000531184 KCNQ3O43525 872 aa23.69■■□□□ 1.38
GSDMD-211ENST00000531184 NF2P35240 595 aa23.69■■□□□ 1.38
GSDMD-211ENST00000531184 SF3B2Q13435 895 aaKnown RBP23.69■■□□□ 1.38
GSDMD-211ENST00000531184 ANKRD1Q15327 319 aa23.69■■□□□ 1.38
GSDMD-211ENST00000531184 ERCC4Q92889 916 aaPredicted RBP23.69■■□□□ 1.38
GSDMD-211ENST00000531184 RCOR1Q9UKL0 485 aa23.69■■□□□ 1.38
GSDMD-211ENST00000531184 RDXP35241 583 aaKnown RBP23.68■■□□□ 1.38
GSDMD-211ENST00000531184 ATP8B2P98198 1209 aa23.68■■□□□ 1.38
GSDMD-211ENST00000531184 CRYMQ14894 314 aa23.68■■□□□ 1.38
GSDMD-211ENST00000531184 TMEM139Q8IV31 216 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms