RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 DPCR1Q3MIW9 517 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 FILIP1LQ4L180 1135 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 LARP1Q6PKG0 1096 aaKnown RBP8.86□□□□□ -0.99
PTPRK-219ENST00000531050 SPATS2Q86XZ4 545 aaKnown RBP8.86□□□□□ -0.99
PTPRK-219ENST00000531050 CCAR1Q8IX12 1150 aaKnown RBP8.86□□□□□ -0.99
PTPRK-219ENST00000531050 ENGASEQ8NFI3 743 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 TCP11Q8WWU5 503 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 SH3GL2Q99962 352 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 PAGR1Q9BTK6 254 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 TMX4Q9H1E5 349 aaPredicted RBP8.86□□□□□ -0.99
PTPRK-219ENST00000531050 KDM4CQ9H3R0 1056 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 SUDS3Q9H7L9 328 aaPredicted RBP8.86□□□□□ -0.99
PTPRK-219ENST00000531050 TBC1D2BQ9UPU7 963 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 GOLGA6CA6NDK9 693 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 TUBBP07437 444 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 GOLGA6DP0CG33 693 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 IDI1Q13907 227 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 KARSQ15046 597 aaKnown RBP8.86□□□□□ -0.99
PTPRK-219ENST00000531050 TBC1D5Q92609 795 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 DPF2Q92785 391 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 EZH1Q92800 747 aaPredicted RBP8.86□□□□□ -0.99
PTPRK-219ENST00000531050 GOLGA6AQ9NYA3 693 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 IMPDH2P12268 514 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 ACCSLQ4AC99 568 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 HHATQ5VTY9 493 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 CAPRIN2Q6IMN6 1127 aaKnown RBP8.85□□□□□ -0.99
PTPRK-219ENST00000531050 PRPF40BQ6NWY9 871 aaKnown RBP8.85□□□□□ -0.99
PTPRK-219ENST00000531050 MIS18BP1Q6P0N0 1132 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 CYB5D1Q6P9G0 228 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 NOA1Q8NC60 698 aaKnown RBP8.85□□□□□ -0.99
PTPRK-219ENST00000531050 MEIS3Q99687 375 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 MMTAG2Q9BU76 263 aaKnown RBP8.85□□□□□ -0.99
PTPRK-219ENST00000531050 HSD3B7Q9H2F3 369 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 MRPL44Q9H9J2 332 aaKnown RBP8.85□□□□□ -0.99
PTPRK-219ENST00000531050 MIS18AQ9NYP9 233 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 STAP2Q9UGK3 403 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 ANAPC4Q9UJX5 808 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 MYO6Q9UM54 1294 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 G3BP2Q9UN86 482 aaKnown RBP8.85□□□□□ -0.99
PTPRK-219ENST00000531050 NDUFAB1O14561 156 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 MAP4K4O95819 1239 aaPredicted RBP8.85□□□□□ -0.99
PTPRK-219ENST00000531050 FESP07332 822 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 ATP1A3P13637 1013 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 RESTQ13127 1097 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 STIM1Q13586 685 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 CCDC50Q8IVM0 306 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 FUKQ8N0W3 1084 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 COG1Q8WTW3 980 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 HOOK2Q96ED9 719 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 CABP2Q9NPB3 220 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 BLOC1S6Q9UL45 172 aa8.85□□□□□ -0.99
PTPRK-219ENST00000531050 A0A1W2PP64 1363 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 SPDYE3A6NKU9 549 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 BIN1O00499 593 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 AHCYL1O43865 530 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 NPHP4O75161 1426 aaPredicted RBP8.84□□□□□ -0.99
PTPRK-219ENST00000531050 SMNDC1O75940 238 aaKnown RBP eCLIP8.84□□□□□ -0.99
PTPRK-219ENST00000531050 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -0.99
PTPRK-219ENST00000531050 CDR1P51861 262 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 TWISTNBQ3B726 338 aaPredicted RBP8.84□□□□□ -0.99
PTPRK-219ENST00000531050 ADCK5Q3MIX3 580 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 NUTM2GQ5VZR2 741 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 CWF19L1Q69YN2 538 aaKnown RBP8.84□□□□□ -0.99
PTPRK-219ENST00000531050 BZW1Q7L1Q6 419 aaKnown RBP8.84□□□□□ -0.99
PTPRK-219ENST00000531050 SPATA21Q7Z572 469 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 VSTM4Q8IW00 320 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 RSRC1Q96IZ7 334 aaKnown RBP8.84□□□□□ -0.99
PTPRK-219ENST00000531050 SCLT1Q96NL6 688 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 ZSWIM6Q9HCJ5 1215 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 TAOK2Q9UL54 1235 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 ZSCAN9O15535 394 aaPredicted RBP8.84□□□□□ -0.99
PTPRK-219ENST00000531050 PFKFB2O60825 505 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 CDKL5O76039 1030 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 SF3B2Q13435 895 aaKnown RBP8.84□□□□□ -0.99
PTPRK-219ENST00000531050 LAMB3Q13751 1172 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 PTPN21Q16825 1174 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 HSP90AB2PQ58FF8 381 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 CCDC181Q5TID7 509 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 RBM12BQ8IXT5 1001 aaKnown RBP8.84□□□□□ -0.99
PTPRK-219ENST00000531050 C8orf58Q8NAV2 365 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 B4GALNT2Q8NHY0 566 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 DESI2Q9BSY9 194 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 STK31Q9BXU1 1019 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 PCDHGC5Q9Y5F6 944 aa8.84□□□□□ -0.99
PTPRK-219ENST00000531050 TMEM232C9JQI7 657 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 HMMRO75330 724 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 LMOD1P29536 600 aaPredicted RBP8.83□□□□□ -1
PTPRK-219ENST00000531050 SLC8A1P32418 973 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 AMPHP49418 695 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 FAM160A1Q05DH4 1040 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 USP4Q13107 963 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 JAKMIP1Q96N16 626 aaKnown RBP8.83□□□□□ -1
PTPRK-219ENST00000531050 PLEKHG4BQ96PX9 1271 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 FMNL2Q96PY5 1086 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 LRRCC1Q9C099 1032 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 MBIPQ9NS73 344 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 ALKQ9UM73 1620 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 CTAGE15A4D2H0 777 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 SLC4A2P04920 1241 aa8.83□□□□□ -1
PTPRK-219ENST00000531050 CTAGE8P0CG41 777 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms