RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ABCF2Q9UG63 623 aa14.89□□□□□ -0.03
TRAPPC4-209ENST00000528230 SSC5DA1L4H1 1573 aa14.89□□□□□ -0.03
TRAPPC4-209ENST00000528230 IGSF3O75054 1194 aa14.88□□□□□ -0.03
TRAPPC4-209ENST00000528230 LBX1P52954 281 aa14.88□□□□□ -0.03
TRAPPC4-209ENST00000528230 DZIP1Q86YF9 867 aaKnown RBP14.88□□□□□ -0.03
TRAPPC4-209ENST00000528230 HOOK2Q96ED9 719 aa14.88□□□□□ -0.03
TRAPPC4-209ENST00000528230 SLC10A4Q96EP9 437 aa14.88□□□□□ -0.03
TRAPPC4-209ENST00000528230 DBNDD2Q9BQY9 259 aa14.88□□□□□ -0.03
TRAPPC4-209ENST00000528230 TMEM39BQ9GZU3 492 aa14.88□□□□□ -0.03
TRAPPC4-209ENST00000528230 GAKO14976 1311 aa14.88□□□□□ -0.03
TRAPPC4-209ENST00000528230 MCAMP43121 646 aa14.87□□□□□ -0.03
TRAPPC4-209ENST00000528230 TTC39AQ5SRH9 613 aa14.87□□□□□ -0.03
TRAPPC4-209ENST00000528230 C20orf194Q5TEA3 1177 aa14.87□□□□□ -0.03
TRAPPC4-209ENST00000528230 CDC42EP5Q6NZY7 148 aa14.87□□□□□ -0.03
TRAPPC4-209ENST00000528230 ANKRD13AQ8IZ07 590 aa14.87□□□□□ -0.03
TRAPPC4-209ENST00000528230 EAF2Q96CJ1 260 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-209ENST00000528230 SAGE1Q9NXZ1 904 aa14.87□□□□□ -0.03
TRAPPC4-209ENST00000528230 EXOC6BQ9Y2D4 811 aa14.87□□□□□ -0.03
TRAPPC4-209ENST00000528230 RPAP1Q9BWH6 1393 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC4-209ENST00000528230 AK9Q5TCS8 1911 aa14.86□□□□□ -0.03
TRAPPC4-209ENST00000528230 LDHCP07864 332 aa14.86□□□□□ -0.03
TRAPPC4-209ENST00000528230 TM4SF4P48230 202 aa14.86□□□□□ -0.03
TRAPPC4-209ENST00000528230 CACNB3P54284 484 aa14.86□□□□□ -0.03
TRAPPC4-209ENST00000528230 GSTO1P78417 241 aa14.86□□□□□ -0.03
TRAPPC4-209ENST00000528230 SIRT2Q8IXJ6 389 aa14.86□□□□□ -0.03
TRAPPC4-209ENST00000528230 FAM151AQ8WW52 585 aa14.86□□□□□ -0.03
TRAPPC4-209ENST00000528230 USP40Q9NVE5 1235 aa14.86□□□□□ -0.03
TRAPPC4-209ENST00000528230 DBNLQ9UJU6 430 aaKnown RBP14.86□□□□□ -0.03
TRAPPC4-209ENST00000528230 FZD1Q9UP38 647 aa14.86□□□□□ -0.03
TRAPPC4-209ENST00000528230 LAMB1P07942 1786 aa14.85□□□□□ -0.03
TRAPPC4-209ENST00000528230 RAB11FIP3O75154 756 aa14.85□□□□□ -0.03
TRAPPC4-209ENST00000528230 MAP4K4O95819 1239 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC4-209ENST00000528230 ZBTB48P10074 688 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC4-209ENST00000528230 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC4-209ENST00000528230 MECOMQ03112 1051 aa14.85□□□□□ -0.03
TRAPPC4-209ENST00000528230 SPRYD7Q5W111 196 aa14.85□□□□□ -0.03
TRAPPC4-209ENST00000528230 RHPN1Q8TCX5 695 aa14.85□□□□□ -0.03
TRAPPC4-209ENST00000528230 KIF1BPQ96EK5 621 aa14.85□□□□□ -0.03
TRAPPC4-209ENST00000528230 IDI2Q9BXS1 227 aa14.85□□□□□ -0.03
TRAPPC4-209ENST00000528230 CCDC8Q9H0W5 538 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC4-209ENST00000528230 GPR75-ASB3A0A0A6YYF3 556 aa14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 INHBEP58166 350 aa14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 MAP3K9P80192 1104 aa14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 IFFO2Q5TF58 517 aa14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 PI16Q6UXB8 463 aa14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 TBC1D9Q6ZT07 1266 aa14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 CDAN1Q8IWY9 1227 aa14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 NSUN4Q96CB9 384 aaKnown RBP14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 RNF186Q9NXI6 227 aa14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 LRP2BPQ9P2M1 347 aa14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 MROH7-TTC4A0A0A0MT08 1334 aa14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 OTOFQ9HC10 1997 aa14.84□□□□□ -0.03
TRAPPC4-209ENST00000528230 ENTPD3O75355 529 aa14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 SREBF2Q12772 1141 aa14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 DCAF15Q66K64 600 aa14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 AACSQ86V21 672 aa14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 TNS4Q8IZW8 715 aa14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 CLASRPQ8N2M8 674 aaKnown RBP14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 ZNF384Q8TF68 577 aa14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 WNK4Q96J92 1243 aa14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 CLMNQ96JQ2 1002 aa14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 RAI14Q9P0K7 980 aa14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 FAM198AQ9UFP1 575 aa14.83□□□□□ -0.04
TRAPPC4-209ENST00000528230 MYO5AQ9Y4I1 1855 aaKnown RBP14.82□□□□□ -0.04
TRAPPC4-209ENST00000528230 CASP8AP2Q9UKL3 1982 aa14.82□□□□□ -0.04
TRAPPC4-209ENST00000528230 MANSC4A6NHS7 340 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC4-209ENST00000528230 TRPA1O75762 1119 aa14.82□□□□□ -0.04
TRAPPC4-209ENST00000528230 CYP2E1P05181 493 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC4-209ENST00000528230 BTDP43251 543 aa14.82□□□□□ -0.04
TRAPPC4-209ENST00000528230 NFIAQ12857 509 aa14.82□□□□□ -0.04
TRAPPC4-209ENST00000528230 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC4-209ENST00000528230 SNRKQ9NRH2 765 aa14.82□□□□□ -0.04
TRAPPC4-209ENST00000528230 TLR7Q9NYK1 1049 aaKnown RBP14.82□□□□□ -0.04
TRAPPC4-209ENST00000528230 TSKSQ9UJT2 592 aa14.82□□□□□ -0.04
TRAPPC4-209ENST00000528230 TCP10Q12799 353 aa14.81□□□□□ -0.04
TRAPPC4-209ENST00000528230 YTHDC1Q96MU7 727 aaKnown RBP14.81□□□□□ -0.04
TRAPPC4-209ENST00000528230 ZNF341Q9BYN7 854 aa14.81□□□□□ -0.04
TRAPPC4-209ENST00000528230 IL1RAPL2Q9NP60 686 aa14.81□□□□□ -0.04
TRAPPC4-209ENST00000528230 CSADQ9Y600 493 aa14.81□□□□□ -0.04
TRAPPC4-209ENST00000528230 MAST2Q6P0Q8 1798 aa14.8□□□□□ -0.04
TRAPPC4-209ENST00000528230 WDHD1O75717 1129 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC4-209ENST00000528230 ZAP70P43403 619 aa14.8□□□□□ -0.04
TRAPPC4-209ENST00000528230 RGS3P49796 1198 aa14.8□□□□□ -0.04
TRAPPC4-209ENST00000528230 RHBDL3P58872 404 aa14.8□□□□□ -0.04
TRAPPC4-209ENST00000528230 MKRN3Q13064 507 aaKnown RBP14.8□□□□□ -0.04
TRAPPC4-209ENST00000528230 NAA16Q6N069 864 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC4-209ENST00000528230 TMED8Q6PL24 325 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC4-209ENST00000528230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.8□□□□□ -0.04
TRAPPC4-209ENST00000528230 RFX7Q2KHR2 1363 aa14.8□□□□□ -0.04
TRAPPC4-209ENST00000528230 BAG3O95817 575 aa14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 ALDH1A1P00352 501 aa14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 IFIT2P09913 472 aaKnown RBP14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 RRP1P56182 461 aaKnown RBP14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 PPP4CP60510 307 aa14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 VGLL4Q14135 290 aa14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 MIGA2Q7L4E1 593 aa14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 ZFPM1Q8IX07 1006 aa14.79□□□□□ -0.04
TRAPPC4-209ENST00000528230 DOCK2Q92608 1830 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms