RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 ALG1Q9BT22 464 aa23.7■■□□□ 1.38
SMIM3-201ENST00000526627 LY9Q9HBG7 655 aa23.7■■□□□ 1.38
SMIM3-201ENST00000526627 FAM217BQ9NTX9 383 aaPredicted RBP23.7■■□□□ 1.38
SMIM3-201ENST00000526627 CEP57L1Q8IYX8 460 aa23.69■■□□□ 1.38
SMIM3-201ENST00000526627 KIAA1468Q9P260 1216 aa23.69■■□□□ 1.38
SMIM3-201ENST00000526627 BECN2A8MW95 431 aa23.68■■□□□ 1.38
SMIM3-201ENST00000526627 PATL2C9JE40 543 aaKnown RBP23.68■■□□□ 1.38
SMIM3-201ENST00000526627 SLC5A1P13866 664 aa23.68■■□□□ 1.38
SMIM3-201ENST00000526627 SYNE3Q6ZMZ3 975 aa23.68■■□□□ 1.38
SMIM3-201ENST00000526627 SGMS1Q86VZ5 419 aa23.68■■□□□ 1.38
SMIM3-201ENST00000526627 AOPEPQ8N6M6 819 aa23.68■■□□□ 1.38
SMIM3-201ENST00000526627 WDHD1O75717 1129 aaPredicted RBP23.68■■□□□ 1.38
SMIM3-201ENST00000526627 IFNL3Q8IZI9 196 aa23.68■■□□□ 1.38
SMIM3-201ENST00000526627 MAGEB6Q8N7X4 407 aa23.68■■□□□ 1.38
SMIM3-201ENST00000526627 SEC31BQ9NQW1 1179 aa23.68■■□□□ 1.38
SMIM3-201ENST00000526627 MBD4O95243 580 aa23.67■■□□□ 1.38
SMIM3-201ENST00000526627 SLC39A14Q15043 492 aa23.67■■□□□ 1.38
SMIM3-201ENST00000526627 KRT40Q6A162 431 aa23.67■■□□□ 1.38
SMIM3-201ENST00000526627 ZNF710Q8N1W2 664 aa23.67■■□□□ 1.38
SMIM3-201ENST00000526627 PHKBQ93100 1093 aa23.67■■□□□ 1.38
SMIM3-201ENST00000526627 MROH7-TTC4A0A0A0MT08 1334 aa23.67■■□□□ 1.38
SMIM3-201ENST00000526627 RANBP6O60518 1105 aaKnown RBP23.67■■□□□ 1.38
SMIM3-201ENST00000526627 CDKL5O76039 1030 aa23.67■■□□□ 1.38
SMIM3-201ENST00000526627 CMA1P23946 247 aa23.67■■□□□ 1.38
SMIM3-201ENST00000526627 ARID5BQ14865 1188 aa23.67■■□□□ 1.38
SMIM3-201ENST00000526627 MICU3Q86XE3 530 aa23.67■■□□□ 1.38
SMIM3-201ENST00000526627 VPS37DQ86XT2 251 aa23.67■■□□□ 1.38
SMIM3-201ENST00000526627 TIAM2Q8IVF5 1701 aa23.66■■□□□ 1.38
SMIM3-201ENST00000526627 ZNF202O95125 648 aa23.66■■□□□ 1.38
SMIM3-201ENST00000526627 DPCR1Q3MIW9 517 aa23.66■■□□□ 1.38
SMIM3-201ENST00000526627 LRRC8AQ8IWT6 810 aa23.66■■□□□ 1.38
SMIM3-201ENST00000526627 FBXW7Q969H0 707 aa23.66■■□□□ 1.38
SMIM3-201ENST00000526627 ZBTB43O43298 467 aa23.66■■□□□ 1.38
SMIM3-201ENST00000526627 PFKFB1P16118 471 aa23.66■■□□□ 1.38
SMIM3-201ENST00000526627 CTDSPL2Q05D32 466 aa23.66■■□□□ 1.38
SMIM3-201ENST00000526627 ARMT1Q9H993 441 aa23.66■■□□□ 1.38
SMIM3-201ENST00000526627 ZSWIM5Q9P217 1185 aa23.66■■□□□ 1.38
SMIM3-201ENST00000526627 CHD4Q14839 1912 aa23.66■■□□□ 1.38
SMIM3-201ENST00000526627 KDM4FA0A1W2PPD8 638 aa23.65■■□□□ 1.38
SMIM3-201ENST00000526627 GSG1L2A8MUP6 293 aa23.65■■□□□ 1.38
SMIM3-201ENST00000526627 RIOK3O14730 519 aaKnown RBP23.65■■□□□ 1.38
SMIM3-201ENST00000526627 MAP3K12Q12852 859 aa23.65■■□□□ 1.38
SMIM3-201ENST00000526627 MYL10Q9BUA6 226 aa23.65■■□□□ 1.38
SMIM3-201ENST00000526627 PTPAQ15257 358 aa23.65■■□□□ 1.38
SMIM3-201ENST00000526627 TMEM67Q5HYA8 995 aa23.65■■□□□ 1.38
SMIM3-201ENST00000526627 MTERF4Q7Z6M4 381 aaKnown RBP23.65■■□□□ 1.38
SMIM3-201ENST00000526627 UTP14AQ9BVJ6 771 aaKnown RBP23.65■■□□□ 1.38
SMIM3-201ENST00000526627 NAT10Q9H0A0 1025 aaKnown RBP23.65■■□□□ 1.38
SMIM3-201ENST00000526627 CCDC87Q9NVE4 849 aa23.65■■□□□ 1.38
SMIM3-201ENST00000526627 PHLPP1O60346 1717 aa23.64■■□□□ 1.38
SMIM3-201ENST00000526627 FAM177BA6PVY3 158 aa23.64■■□□□ 1.38
SMIM3-201ENST00000526627 CAMTA2O94983 1202 aa23.64■■□□□ 1.38
SMIM3-201ENST00000526627 MARCKSP29966 332 aaPredicted RBP23.64■■□□□ 1.38
SMIM3-201ENST00000526627 LIFRP42702 1097 aa23.64■■□□□ 1.38
SMIM3-201ENST00000526627 BPIFA3Q9BQP9 254 aa23.64■■□□□ 1.38
SMIM3-201ENST00000526627 NAPBQ9H115 298 aa23.64■■□□□ 1.38
SMIM3-201ENST00000526627 UBE2Q2LH0YL09 131 aa23.64■■□□□ 1.37
SMIM3-201ENST00000526627 MPHOSPH8Q99549 860 aa23.64■■□□□ 1.37
SMIM3-201ENST00000526627 MAP3K14Q99558 947 aa23.64■■□□□ 1.37
SMIM3-201ENST00000526627 RREB1Q92766 1687 aa23.63■■□□□ 1.37
SMIM3-201ENST00000526627 GOLGA8AA7E2F4 631 aa23.63■■□□□ 1.37
SMIM3-201ENST00000526627 PRKAB2O43741 272 aa23.63■■□□□ 1.37
SMIM3-201ENST00000526627 SLC3A2P08195 630 aaKnown RBP23.63■■□□□ 1.37
SMIM3-201ENST00000526627 CRKLP46109 303 aaKnown RBP23.63■■□□□ 1.37
SMIM3-201ENST00000526627 CPLX2Q6PUV4 134 aaKnown RBP23.63■■□□□ 1.37
SMIM3-201ENST00000526627 COL22A1Q8NFW1 1626 aaPredicted RBP23.63■■□□□ 1.37
SMIM3-201ENST00000526627 U2AF2P26368 475 aaKnown RBP eCLIP23.62■■□□□ 1.37
SMIM3-201ENST00000526627 RBM6P78332 1123 aaKnown RBP23.62■■□□□ 1.37
SMIM3-201ENST00000526627 NFXL1Q6ZNB6 911 aa23.62■■□□□ 1.37
SMIM3-201ENST00000526627 NBPF11Q86T75 865 aa23.62■■□□□ 1.37
SMIM3-201ENST00000526627 HPSEQ9Y251 543 aa23.62■■□□□ 1.37
SMIM3-201ENST00000526627 IARSP41252 1262 aaKnown RBP23.62■■□□□ 1.37
SMIM3-201ENST00000526627 BCAMP50895 628 aa23.62■■□□□ 1.37
SMIM3-201ENST00000526627 AKNAD1Q5T1N1 836 aa23.62■■□□□ 1.37
SMIM3-201ENST00000526627 BCORQ6W2J9 1755 aa23.62■■□□□ 1.37
SMIM3-201ENST00000526627 PPP6R2O75170 966 aa23.61■■□□□ 1.37
SMIM3-201ENST00000526627 NLRP12P59046 1061 aa23.61■■□□□ 1.37
SMIM3-201ENST00000526627 CHAF1AQ13111 956 aaPredicted RBP23.61■■□□□ 1.37
SMIM3-201ENST00000526627 LCORLQ8N3X6 602 aa23.61■■□□□ 1.37
SMIM3-201ENST00000526627 C16orf45Q96MC5 204 aaPredicted RBP23.61■■□□□ 1.37
SMIM3-201ENST00000526627 NID2Q14112 1375 aa23.61■■□□□ 1.37
SMIM3-201ENST00000526627 RTL9Q8NET4 1388 aa23.61■■□□□ 1.37
SMIM3-201ENST00000526627 COL4A1P02462 1669 aa23.61■■□□□ 1.37
SMIM3-201ENST00000526627 STK36Q9NRP7 1315 aa23.61■■□□□ 1.37
SMIM3-201ENST00000526627 IFIT3O14879 490 aaKnown RBP23.61■■□□□ 1.37
SMIM3-201ENST00000526627 NTSR2O95665 410 aa23.61■■□□□ 1.37
SMIM3-201ENST00000526627 SHC4Q6S5L8 630 aa23.61■■□□□ 1.37
SMIM3-201ENST00000526627 MYH14Q7Z406 1995 aaKnown RBP23.61■■□□□ 1.37
SMIM3-201ENST00000526627 PNPLA7Q6ZV29 1317 aa23.6■■□□□ 1.37
SMIM3-201ENST00000526627 FAM237AA0A1B0GTK4 181 aa23.6■■□□□ 1.37
SMIM3-201ENST00000526627 NEMFO60524 1076 aa23.6■■□□□ 1.37
SMIM3-201ENST00000526627 TIGD1Q96MW7 591 aa23.6■■□□□ 1.37
SMIM3-201ENST00000526627 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.6■■□□□ 1.37
SMIM3-201ENST00000526627 BCL2L12Q9HB09 334 aa23.6■■□□□ 1.37
SMIM3-201ENST00000526627 BCL9LQ86UU0 1499 aa23.6■■□□□ 1.37
SMIM3-201ENST00000526627 BIN1O00499 593 aa23.6■■□□□ 1.37
SMIM3-201ENST00000526627 CCZ1BP86790 482 aa23.6■■□□□ 1.37
SMIM3-201ENST00000526627 CCZ1P86791 482 aaPredicted RBP23.6■■□□□ 1.37
SMIM3-201ENST00000526627 ITPK1Q13572 414 aa23.6■■□□□ 1.37
SMIM3-201ENST00000526627 CNNM2Q9H8M5 875 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms