RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 LZTFL1Q9NQ48 299 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 POLR3EQ9NVU0 708 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 PUF60Q9UHX1 559 aaKnown RBP15.18■□□□□ 0.02
CAPN1-202ENST00000524773 RABL6Q3YEC7 729 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-202ENST00000524773 KRBA2Q6ZNG9 492 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 DHX58Q96C10 678 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 ALG1Q9BT22 464 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 SUGCTQ9HAC7 445 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 PRR29P0C7W0 189 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 CASP7P55210 303 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 MYL5Q02045 173 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 FMR1Q06787 632 aaKnown RBP eCLIP15.17■□□□□ 0.021e-6■■■□□ 16.5
CAPN1-202ENST00000524773 CHRNA2Q15822 529 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 RAPGEF4Q8WZA2 1011 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 NFAT5O94916 1531 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 NRDCO43847 1150 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 A1BGP04217 495 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 APPP05067 770 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 CMA1P23946 247 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 CASP1P29466 404 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 ZAP70P43403 619 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 TRIM34Q9BYJ4 488 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 LCMT1Q9UIC8 334 aa15.17■□□□□ 0.02
CAPN1-202ENST00000524773 RALYLQ86SE5 291 aaKnown RBP15.16■□□□□ 0.02
CAPN1-202ENST00000524773 TMEM139Q8IV31 216 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 SYNE4Q8N205 404 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 PARD6BQ9BYG5 372 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 KCND1Q9NSA2 647 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 MST1RQ04912 1400 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 YEATS4O95619 227 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 CSB-PGBD3P0DP91 1061 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 CASQ1P31415 396 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 RAD51AP2Q09MP3 1159 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 IMMTQ16891 758 aaKnown RBP15.16■□□□□ 0.02
CAPN1-202ENST00000524773 KRT40Q6A162 431 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 VSTM4Q8IW00 320 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 DCCP43146 1447 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 KIF1AQ12756 1690 aa15.16■□□□□ 0.02
CAPN1-202ENST00000524773 NBPF26B4DH59 902 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 TRIM66O15016 1216 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 PPP2R3AQ06190 1150 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 SMC1AQ14683 1233 aaKnown RBP15.15■□□□□ 0.02
CAPN1-202ENST00000524773 NBPF14Q5TI25 921 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 CC2D1AQ6P1N0 951 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-202ENST00000524773 NBPF10Q6P3W6 841 aaKnown RBP15.15■□□□□ 0.02
CAPN1-202ENST00000524773 CYB5R4Q7L1T6 521 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 NBPF15Q8N660 670 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 CNNM3Q8NE01 707 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 MRPL44Q9H9J2 332 aaKnown RBP15.15■□□□□ 0.02
CAPN1-202ENST00000524773 SAMSN1Q9NSI8 373 aaKnown RBP15.15■□□□□ 0.02
CAPN1-202ENST00000524773 ARGLU1Q9NWB6 273 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-202ENST00000524773 CALCOCO1Q9P1Z2 691 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 LMTK3Q96Q04 1460 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 OVOS2A0A0G2JMS6 1433 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 SLC39A14Q15043 492 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 MB21D2Q8IYB1 491 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-202ENST00000524773 BAG1Q99933 345 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-202ENST00000524773 BPIFA3Q9BQP9 254 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 ABCC6O95255 1503 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 KDM6AO15550 1401 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-202ENST00000524773 SOWAHDA6NJG2 315 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 H3BQF6 201 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 ABL1P00519 1130 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 SNRPA1P09661 255 aaKnown RBP15.15■□□□□ 0.02
CAPN1-202ENST00000524773 STX17P56962 302 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 MCM6Q14566 821 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 SKIDA1Q1XH10 827 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 LRRFIP1Q32MZ4 808 aaKnown RBP15.15■□□□□ 0.02
CAPN1-202ENST00000524773 TTC39AQ5SRH9 613 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 ATL3Q6DD88 541 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 KCNJ14Q9UNX9 436 aa15.15■□□□□ 0.02
CAPN1-202ENST00000524773 PHLPP2Q6ZVD8 1323 aa15.14■□□□□ 0.01
CAPN1-202ENST00000524773 B4E1Z4 1266 aa15.14■□□□□ 0.01
CAPN1-202ENST00000524773 KLHL10Q6JEL2 608 aa15.14■□□□□ 0.01
CAPN1-202ENST00000524773 USP49Q70CQ1 688 aa15.14■□□□□ 0.01
CAPN1-202ENST00000524773 NBPF3Q9H094 633 aa15.14■□□□□ 0.01
CAPN1-202ENST00000524773 MYH15Q9Y2K3 1946 aa15.14■□□□□ 0.01
CAPN1-202ENST00000524773 PHKG2P15735 406 aa15.14■□□□□ 0.01
CAPN1-202ENST00000524773 TBC1D10CQ8IV04 446 aa15.14■□□□□ 0.01
CAPN1-202ENST00000524773 CCDC12Q8WUD4 166 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-202ENST00000524773 ANKRD65E5RJM6 399 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 ZNF213O14771 459 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 N4BP1O75113 896 aaKnown RBP15.13■□□□□ 0.01
CAPN1-202ENST00000524773 GUCY1A2P33402 732 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 LMAN1P49257 510 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 OLFM4Q6UX06 510 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 CREBRFQ8IUR6 639 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 XAGE2Q96GT9 111 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 ZKSCAN3Q9BRR0 538 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 NFE2L3Q9Y4A8 694 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 LMO7Q8WWI1 1683 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 TEX33O43247 280 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 GPAA1O43292 621 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 CERS3Q8IU89 383 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 KCNH3Q9ULD8 1083 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 MRC1P22897 1456 aa15.13■□□□□ 0.01
CAPN1-202ENST00000524773 EFCAB8A8MWE9 144 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 EYA2O00167 538 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 CYP27B1O15528 508 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms