RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 PCDHA7Q9UN72 937 aa11.65□□□□□ -0.54
SPIDR-224ENST00000524126 C11orf91Q3C1V1 193 aa11.65□□□□□ -0.54
SPIDR-224ENST00000524126 NOA1Q8NC60 698 aaKnown RBP11.65□□□□□ -0.54
SPIDR-224ENST00000524126 TBC1D22AQ8WUA7 517 aa11.65□□□□□ -0.54
SPIDR-224ENST00000524126 MRPS27Q92552 414 aaKnown RBP11.65□□□□□ -0.54
SPIDR-224ENST00000524126 SEC62Q99442 399 aaKnown RBP11.65□□□□□ -0.54
SPIDR-224ENST00000524126 BPIFA3Q9BQP9 254 aa11.65□□□□□ -0.54
SPIDR-224ENST00000524126 C19orf44Q9H6X5 657 aa11.65□□□□□ -0.54
SPIDR-224ENST00000524126 VEZTQ9HBM0 779 aa11.65□□□□□ -0.54
SPIDR-224ENST00000524126 INTS13Q9NVM9 706 aa11.65□□□□□ -0.54
SPIDR-224ENST00000524126 H0YHG0 523 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
SPIDR-224ENST00000524126 NLRP12P59046 1061 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 ACTN3Q08043 901 aaPredicted RBP11.64□□□□□ -0.55
SPIDR-224ENST00000524126 C1orf167Q5SNV9 1468 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 PPP1R42Q7Z4L9 355 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 STAG1Q8WVM7 1258 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 RUFY2Q8WXA3 655 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 EYA1Q99502 592 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 CDC23Q9UJX2 597 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 PSMA5P28066 241 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 NF2P35240 595 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 IRAK1P51617 712 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 CEP112Q8N8E3 955 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 BCAS4Q8TDM0 211 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 LRRC2Q9BYS8 371 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 ACBD3Q9H3P7 528 aa11.64□□□□□ -0.55
SPIDR-224ENST00000524126 HOXC9P31274 260 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 FNTAP49354 379 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 SARNPP82979 210 aaKnown RBP11.63□□□□□ -0.55
SPIDR-224ENST00000524126 KRT28Q7Z3Y7 464 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 HOMEZQ8IX15 550 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 XIRP1Q702N8 1843 aaKnown RBP11.63□□□□□ -0.55
SPIDR-224ENST00000524126 GOLGA6L9A6NEM1 432 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 SKAP2O75563 359 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-224ENST00000524126 ZNF202O95125 648 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 SLC3A2P08195 630 aaKnown RBP11.63□□□□□ -0.55
SPIDR-224ENST00000524126 GCFC2P16383 781 aaKnown RBP11.63□□□□□ -0.55
SPIDR-224ENST00000524126 RDXP35241 583 aaKnown RBP11.63□□□□□ -0.55
SPIDR-224ENST00000524126 PDE6BP35913 854 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 NMIQ13287 307 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-224ENST00000524126 ANKRD1Q15327 319 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 KIF4BQ2VIQ3 1234 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 ILDR2Q71H61 639 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 TC2NQ8N9U0 490 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 LRRC59Q96AG4 307 aaKnown RBP11.63□□□□□ -0.55
SPIDR-224ENST00000524126 A1CFQ9NQ94 594 aaKnown RBP11.63□□□□□ -0.55
SPIDR-224ENST00000524126 ODF2LQ9ULJ1 636 aa11.63□□□□□ -0.55
SPIDR-224ENST00000524126 SOWAHDA6NJG2 315 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 SHOX2O60902 331 aaPredicted RBP11.62□□□□□ -0.55
SPIDR-224ENST00000524126 ATF3P18847 181 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 GGCXP38435 758 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 CCNHP51946 323 aaPredicted RBP11.62□□□□□ -0.55
SPIDR-224ENST00000524126 ZC3H6P61129 1189 aaKnown RBP11.62□□□□□ -0.55
SPIDR-224ENST00000524126 GSPT2Q8IYD1 628 aaKnown RBP11.62□□□□□ -0.55
SPIDR-224ENST00000524126 HPCAL4Q9UM19 191 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 SH3BP1Q9Y3L3 701 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 TBC1D8BQ0IIM8 1120 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 PREPLQ4J6C6 727 aaPredicted RBP11.62□□□□□ -0.55
SPIDR-224ENST00000524126 ZNF569Q5MCW4 686 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 TEX11Q8IYF3 940 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 SSH3Q8TE77 659 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 MAP4K1Q92918 833 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 USP44Q9H0E7 712 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 MST1RQ04912 1400 aa11.62□□□□□ -0.55
SPIDR-224ENST00000524126 LTN1O94822 1766 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 ZC3H4Q9UPT8 1303 aaKnown RBP11.61□□□□□ -0.55
SPIDR-224ENST00000524126 EME2A4GXA9 379 aaPredicted RBP11.61□□□□□ -0.55
SPIDR-224ENST00000524126 CBFA2T2O43439 604 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 UBTFL1P0CB47 393 aaPredicted RBP11.61□□□□□ -0.55
SPIDR-224ENST00000524126 AARSP49588 968 aaKnown RBP eCLIP11.61□□□□□ -0.55
SPIDR-224ENST00000524126 AKAP17AQ02040 695 aaKnown RBP11.61□□□□□ -0.55
SPIDR-224ENST00000524126 DDR1Q08345 913 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 CENPHQ9H3R5 247 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 RGPD2P0DJD1 1756 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 FLIIQ13045 1269 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 IQCA1Q86XH1 822 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 XAGE2Q96GT9 111 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 GBP3Q9H0R5 595 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 AXIN2Q9Y2T1 843 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 SBNO1A3KN83 1393 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 FLT4P35916 1363 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 GRIN2DO15399 1336 aa11.61□□□□□ -0.55
SPIDR-224ENST00000524126 A0A0D9SFI3 127 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 KIF3CO14782 793 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 CHUKO15111 745 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 ZMYND10O75800 440 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 GLRX3O76003 335 aaKnown RBP11.6□□□□□ -0.55
SPIDR-224ENST00000524126 ABL1P00519 1130 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 GNGT1P63211 74 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 NCAPH2Q6IBW4 605 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 SLC35F6Q8N357 371 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 FAM76AQ8TAV0 307 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 CNKSR2Q8WXI2 1034 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.6□□□□□ -0.55
SPIDR-224ENST00000524126 CTAGE15A4D2H0 777 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 STX10O60499 249 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 CTAGE8P0CG41 777 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms