RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ADAMTS1Q9UHI8 967 aa6.12□□□□□ -1.43
SKP1-212ENST00000523966 PCDHB5Q9Y5E4 795 aa6.12□□□□□ -1.43
SKP1-212ENST00000523966 FAM181BA6NEQ2 426 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 DDX3YO15523 660 aaKnown RBP6.11□□□□□ -1.43
SKP1-212ENST00000523966 APOBRQ0VD83 1088 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 COL9A3Q14050 684 aaPredicted RBP6.11□□□□□ -1.43
SKP1-212ENST00000523966 SEPT6Q14141 434 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 FBXL19Q6PCT2 694 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 LINC00114Q6XXX2 140 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 GALNT11Q8NCW6 608 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 STK35Q8TDR2 534 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 NKD1Q969G9 470 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 TRIM11Q96F44 468 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 SCARF2Q96GP6 870 aaPredicted RBP6.11□□□□□ -1.43
SKP1-212ENST00000523966 RHOVQ96L33 236 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 TANGO6Q9C0B7 1094 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 PCDHA4Q9UN74 947 aa6.11□□□□□ -1.43
SKP1-212ENST00000523966 DEAF1O75398 565 aaPredicted RBP6.1□□□□□ -1.43
SKP1-212ENST00000523966 ELNP15502 786 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 ATP2B1P20020 1258 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 MCM4P33991 863 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 ZNF252P-AS1Q0IIN9 211 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 CWF19L2Q2TBE0 894 aaKnown RBP6.1□□□□□ -1.43
SKP1-212ENST00000523966 EXOSC6Q5RKV6 272 aaKnown RBP6.1□□□□□ -1.43
SKP1-212ENST00000523966 LCE2AQ5TA79 106 aaPredicted RBP6.1□□□□□ -1.43
SKP1-212ENST00000523966 IGF2-ASQ6U949 168 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 FAM196AQ6ZSG2 479 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 PDZD3Q86UT5 571 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 CPLX3Q8WVH0 158 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 GATAD2BQ8WXI9 593 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 TINF2Q9BSI4 451 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 RUSC1Q9BVN2 902 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 PICK1Q9NRD5 415 aa6.1□□□□□ -1.43
SKP1-212ENST00000523966 CNTNAP5Q8WYK1 1306 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 LOC100289279A0A1B0GTE1 492 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 FAM229AH3BQW9 127 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 TLR3O15455 904 aaKnown RBP6.09□□□□□ -1.43
SKP1-212ENST00000523966 GREM1O60565 184 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 APBA3O96018 575 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 F13A1P00488 732 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 HOXB4P17483 251 aaPredicted RBP6.09□□□□□ -1.43
SKP1-212ENST00000523966 LIG1P18858 919 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 COL9A2Q14055 689 aaPredicted RBP6.09□□□□□ -1.43
SKP1-212ENST00000523966 MPP2Q14168 576 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 SEZ6Q53EL9 994 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 NUTM2GQ5VZR2 741 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 BNC2Q6ZN30 1099 aaPredicted RBP6.09□□□□□ -1.43
SKP1-212ENST00000523966 ACAD11Q709F0 780 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 HDXQ7Z353 690 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 GPBAR1Q8TDU6 330 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 ELMO3Q96BJ8 720 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 NACC1Q96RE7 527 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.09□□□□□ -1.43
SKP1-212ENST00000523966 MRPL18Q9H0U6 180 aaKnown RBP6.09□□□□□ -1.43
SKP1-212ENST00000523966 CCDC86Q9H6F5 360 aaKnown RBP6.09□□□□□ -1.43
SKP1-212ENST00000523966 CYP4F12Q9HCS2 524 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 PRKAG2Q9UGJ0 569 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 ADAMTS8Q9UP79 889 aa6.09□□□□□ -1.43
SKP1-212ENST00000523966 DLL1O00548 723 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 SSBP05455 408 aaKnown RBP eCLIP6.08□□□□□ -1.44
SKP1-212ENST00000523966 GJA8P48165 433 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 ZNF165P49910 485 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 FOXD4L6Q3SYB3 417 aaPredicted RBP6.08□□□□□ -1.44
SKP1-212ENST00000523966 RASIP1Q5U651 963 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 FOXD4L3Q6VB84 417 aaPredicted RBP6.08□□□□□ -1.44
SKP1-212ENST00000523966 UBASH3BQ8TF42 649 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 EAF1Q96JC9 268 aaPredicted RBP6.08□□□□□ -1.44
SKP1-212ENST00000523966 SEC16BQ96JE7 1060 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 RNF208Q9H0X6 261 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 KCNQ5Q9NR82 932 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 KCNK4Q9NYG8 393 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 UBP1Q9NZI7 540 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 USP21Q9UK80 565 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 SNCAIPQ9Y6H5 919 aa6.08□□□□□ -1.44
SKP1-212ENST00000523966 ADAM11O75078 769 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 AOC2O75106 756 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 CILPO75339 1184 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 ECEL1O95672 775 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 SPATA31C1P0DKV0 1188 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 GARTP22102 1010 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 RPL6Q02878 288 aaKnown RBP6.07□□□□□ -1.44
SKP1-212ENST00000523966 MLECQ14165 292 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 FBXW10Q5XX13 1052 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 FDX2Q6P4F2 183 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 ILDR2Q71H61 639 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 RASGRP4Q8TDF6 673 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 CRBNQ96SW2 442 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 EFR3BQ9Y2G0 817 aa6.07□□□□□ -1.44
SKP1-212ENST00000523966 C9orf172C9J069 976 aa6.06□□□□□ -1.44
SKP1-212ENST00000523966 SART1O43290 800 aaKnown RBP6.06□□□□□ -1.44
SKP1-212ENST00000523966 ATF4P18848 351 aaPredicted RBP6.06□□□□□ -1.44
SKP1-212ENST00000523966 GTF2F1P35269 517 aaKnown RBP eCLIP6.06□□□□□ -1.44
SKP1-212ENST00000523966 NASPP49321 788 aaPredicted RBP6.06□□□□□ -1.44
SKP1-212ENST00000523966 NRG1Q02297 640 aaPredicted RBP6.06□□□□□ -1.44
SKP1-212ENST00000523966 KIF4BQ2VIQ3 1234 aa6.06□□□□□ -1.44
SKP1-212ENST00000523966 AKAP4Q5JQC9 854 aa6.06□□□□□ -1.44
SKP1-212ENST00000523966 C12orf50Q8NA57 414 aaPredicted RBP6.06□□□□□ -1.44
SKP1-212ENST00000523966 GAL3ST3Q96A11 431 aa6.06□□□□□ -1.44
SKP1-212ENST00000523966 FERD3LQ96RJ6 166 aa6.06□□□□□ -1.44
SKP1-212ENST00000523966 NRSN2Q9GZP1 204 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms