RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 HHIPL2Q6UWX4 724 aa32.47■■■□□ 2.79
PVT1-219ENST00000523427 CPA4Q9UI42 421 aa32.47■■■□□ 2.79
PVT1-219ENST00000523427 SUGT1Q9Y2Z0 365 aa32.47■■■□□ 2.79
PVT1-219ENST00000523427 SLC5A1P13866 664 aa32.46■■■□□ 2.79
PVT1-219ENST00000523427 FGFR2P21802 821 aa32.46■■■□□ 2.79
PVT1-219ENST00000523427 ZSWIM8A7E2V4 1837 aa32.46■■■□□ 2.79
PVT1-219ENST00000523427 EYA2O00167 538 aa32.45■■■□□ 2.79
PVT1-219ENST00000523427 DIXDC1Q155Q3 683 aa32.45■■■□□ 2.79
PVT1-219ENST00000523427 BRCA2P51587 3418 aa32.45■■■□□ 2.78
PVT1-219ENST00000523427 PPATQ06203 517 aa32.44■■■□□ 2.78
PVT1-219ENST00000523427 WDR66Q8TBY9 1149 aa32.44■■■□□ 2.78
PVT1-219ENST00000523427 SSH1Q8WYL5 1049 aa32.44■■■□□ 2.78
PVT1-219ENST00000523427 ZCCHC17Q9NP64 241 aaKnown RBP32.44■■■□□ 2.78
PVT1-219ENST00000523427 PTPRCP08575 1304 aa32.44■■■□□ 2.78
PVT1-219ENST00000523427 FAM151AQ8WW52 585 aa32.43■■■□□ 2.78
PVT1-219ENST00000523427 CDC42EP5Q6NZY7 148 aa32.42■■■□□ 2.78
PVT1-219ENST00000523427 LPIN2Q92539 896 aa32.42■■■□□ 2.78
PVT1-219ENST00000523427 SIL1Q9H173 461 aa32.42■■■□□ 2.78
PVT1-219ENST00000523427 DAGLAQ9Y4D2 1042 aa32.42■■■□□ 2.78
PVT1-219ENST00000523427 PDHXO00330 501 aa32.41■■■□□ 2.78
PVT1-219ENST00000523427 PSMC4P43686 418 aa32.41■■■□□ 2.78
PVT1-219ENST00000523427 NFIAQ12857 509 aa32.41■■■□□ 2.78
PVT1-219ENST00000523427 COLQQ9Y215 455 aaPredicted RBP32.41■■■□□ 2.78
PVT1-219ENST00000523427 CTGFP29279 349 aa32.4■■■□□ 2.78
PVT1-219ENST00000523427 RFX5P48382 616 aaPredicted RBP32.4■■■□□ 2.78
PVT1-219ENST00000523427 C17orf99Q6UX52 265 aa32.4■■■□□ 2.78
PVT1-219ENST00000523427 KIF16BQ96L93 1317 aa32.4■■■□□ 2.78
PVT1-219ENST00000523427 FMNL1O95466 1100 aaPredicted RBP32.39■■■□□ 2.78
PVT1-219ENST00000523427 PRDX5P30044 214 aa32.39■■■□□ 2.78
PVT1-219ENST00000523427 MTFR1Q15390 333 aa32.39■■■□□ 2.78
PVT1-219ENST00000523427 USP40Q9NVE5 1235 aa32.39■■■□□ 2.78
PVT1-219ENST00000523427 ZNF521Q96K83 1311 aa32.39■■■□□ 2.78
PVT1-219ENST00000523427 RPAP1Q9BWH6 1393 aaPredicted RBP32.39■■■□□ 2.78
PVT1-219ENST00000523427 CEP290O15078 2479 aa32.38■■■□□ 2.77
PVT1-219ENST00000523427 ZNF316A6NFI3 1004 aaPredicted RBP32.38■■■□□ 2.77
PVT1-219ENST00000523427 GNRH1P01148 92 aa32.38■■■□□ 2.77
PVT1-219ENST00000523427 ANKRD23Q86SG2 305 aa32.38■■■□□ 2.77
PVT1-219ENST00000523427 TRIM47Q96LD4 638 aa32.38■■■□□ 2.77
PVT1-219ENST00000523427 H0YGN5 161 aa32.37■■■□□ 2.77
PVT1-219ENST00000523427 FXR1P51114 621 aaKnown RBP eCLIP32.37■■■□□ 2.77
PVT1-219ENST00000523427 ATG9AQ7Z3C6 839 aa32.37■■■□□ 2.77
PVT1-219ENST00000523427 AK9Q5TCS8 1911 aa32.37■■■□□ 2.77
PVT1-219ENST00000523427 LDHBP07195 334 aaKnown RBP32.36■■■□□ 2.77
PVT1-219ENST00000523427 PRMT2P55345 433 aa32.36■■■□□ 2.77
PVT1-219ENST00000523427 ZFPM1Q8IX07 1006 aa32.36■■■□□ 2.77
PVT1-219ENST00000523427 RAET1EQ8TD07 263 aa32.36■■■□□ 2.77
PVT1-219ENST00000523427 OSBPP22059 807 aa32.35■■■□□ 2.77
PVT1-219ENST00000523427 ATP2B3Q16720 1220 aa32.35■■■□□ 2.77
PVT1-219ENST00000523427 GNL3LQ9NVN8 582 aaKnown RBP32.35■■■□□ 2.77
PVT1-219ENST00000523427 FAM198AQ9UFP1 575 aa32.35■■■□□ 2.77
PVT1-219ENST00000523427 SRRDQ9UH36 339 aa32.35■■■□□ 2.77
PVT1-219ENST00000523427 ZNF112Q9UJU3 913 aa32.35■■■□□ 2.77
PVT1-219ENST00000523427 HOXD10P28358 340 aa32.34■■■□□ 2.77
PVT1-219ENST00000523427 CEP126Q9P2H0 1117 aa32.34■■■□□ 2.77
PVT1-219ENST00000523427 BIN2Q9UBW5 565 aaPredicted RBP32.34■■■□□ 2.77
PVT1-219ENST00000523427 KCNH4Q9UQ05 1017 aa32.34■■■□□ 2.77
PVT1-219ENST00000523427 E9PSI1 815 aa32.32■■■□□ 2.76
PVT1-219ENST00000523427 CYP2C8P10632 490 aa32.32■■■□□ 2.76
PVT1-219ENST00000523427 GRK4P32298 578 aa32.32■■■□□ 2.76
PVT1-219ENST00000523427 DPF3Q92784 378 aa32.32■■■□□ 2.76
PVT1-219ENST00000523427 MYPNQ86TC9 1320 aa32.31■■■□□ 2.76
PVT1-219ENST00000523427 UBTFL1P0CB47 393 aaPredicted RBP32.31■■■□□ 2.76
PVT1-219ENST00000523427 PHKA1P46020 1223 aa32.31■■■□□ 2.76
PVT1-219ENST00000523427 MOGSQ13724 837 aa32.31■■■□□ 2.76
PVT1-219ENST00000523427 SMC4Q9NTJ3 1288 aa32.31■■■□□ 2.76
PVT1-219ENST00000523427 MYH13Q9UKX3 1938 aa32.3■■■□□ 2.76
PVT1-219ENST00000523427 ZSCAN29Q8IWY8 852 aaPredicted RBP32.3■■■□□ 2.76
PVT1-219ENST00000523427 SHISA4Q96DD7 197 aa32.3■■■□□ 2.76
PVT1-219ENST00000523427 PARK7Q99497 189 aaKnown RBP32.3■■■□□ 2.76
PVT1-219ENST00000523427 ADGRA2Q96PE1 1338 aa32.29■■■□□ 2.76
PVT1-219ENST00000523427 NOL9Q5SY16 702 aaKnown RBP32.29■■■□□ 2.76
PVT1-219ENST00000523427 TRIOBPQ9H2D6 2365 aa32.28■■■□□ 2.76
PVT1-219ENST00000523427 RGS3P49796 1198 aa32.28■■■□□ 2.76
PVT1-219ENST00000523427 DENND2AQ9ULE3 1009 aa32.28■■■□□ 2.76
PVT1-219ENST00000523427 PA2G4Q9UQ80 394 aaKnown RBP32.28■■■□□ 2.76
PVT1-219ENST00000523427 ZHX2Q9Y6X8 837 aa32.28■■■□□ 2.76
PVT1-219ENST00000523427 CCL5P13501 91 aa32.27■■■□□ 2.76
PVT1-219ENST00000523427 ADORA1P30542 326 aa32.27■■■□□ 2.76
PVT1-219ENST00000523427 PRKCZQ05513 592 aa32.27■■■□□ 2.76
PVT1-219ENST00000523427 GPAT2Q6NUI2 795 aa32.27■■■□□ 2.76
PVT1-219ENST00000523427 PICK1Q9NRD5 415 aa32.27■■■□□ 2.76
PVT1-219ENST00000523427 CIAO1O76071 339 aa32.26■■■□□ 2.75
PVT1-219ENST00000523427 SLURP2P0DP57 97 aa32.26■■■□□ 2.75
PVT1-219ENST00000523427 SLFN5Q08AF3 891 aa32.26■■■□□ 2.75
PVT1-219ENST00000523427 CHRDL2Q6WN34 429 aa32.26■■■□□ 2.75
PVT1-219ENST00000523427 GADL1Q6ZQY3 521 aa32.26■■■□□ 2.75
PVT1-219ENST00000523427 RNF208Q9H0X6 261 aa32.26■■■□□ 2.75
PVT1-219ENST00000523427 CXCL11O14625 94 aa32.25■■■□□ 2.75
PVT1-219ENST00000523427 FCGRTP55899 365 aa32.25■■■□□ 2.75
PVT1-219ENST00000523427 CDCA7LQ96GN5 454 aa32.25■■■□□ 2.75
PVT1-219ENST00000523427 ABCF2Q9UG63 623 aa32.25■■■□□ 2.75
PVT1-219ENST00000523427 LRRFIP2Q9Y608 721 aaKnown RBP32.25■■■□□ 2.75
PVT1-219ENST00000523427 ALDH1L2Q3SY69 923 aa32.24■■■□□ 2.75
PVT1-219ENST00000523427 SCYL3Q8IZE3 742 aa32.24■■■□□ 2.75
PVT1-219ENST00000523427 BCRP11274 1271 aa32.23■■■□□ 2.75
PVT1-219ENST00000523427 PICALMQ13492 652 aa32.23■■■□□ 2.75
PVT1-219ENST00000523427 DZIP1Q86YF9 867 aaKnown RBP32.23■■■□□ 2.75
PVT1-219ENST00000523427 NKX2-3Q8TAU0 364 aa32.23■■■□□ 2.75
PVT1-219ENST00000523427 FBXO3Q9UK99 471 aa32.23■■■□□ 2.75
PVT1-219ENST00000523427 GABRQQ9UN88 632 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms