RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TACC1O75410 805 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 SPATA5Q8NB90 893 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 RGS22Q8NE09 1264 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 SREK1Q8WXA9 508 aaKnown RBP18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 IFT74Q96LB3 600 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 FNBP1Q96RU3 617 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 CCDC175P0C221 793 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 PKD2L1Q9P0L9 805 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 KRT83P78385 493 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 ZYXQ15942 572 aaKnown RBP18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 NLGN1Q8N2Q7 840 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 PSMD1Q99460 953 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 TMX1Q9H3N1 280 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 FRMD4BQ9Y2L6 1034 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 FERP16591 822 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 CNKSR1Q969H4 720 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 CSADQ9Y600 493 aa18.32■□□□□ 0.52
PCDHA3-201ENST00000522353 LTKP29376 864 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 CEP135Q66GS9 1140 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 RASAL2Q9UJF2 1139 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 CCT6AP40227 531 aaKnown RBP18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 SLC8A3P57103 927 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 FAM107BQ9H098 131 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 USP19O94966 1318 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 ATP2A1O14983 1001 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 EEF2P13639 858 aaKnown RBP18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 CCDC24Q8N4L8 307 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 TEKT1Q969V4 418 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 SUCLG2Q96I99 432 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 CCDC42Q96M95 316 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 ERBB4Q15303 1308 aa18.31■□□□□ 0.52
PCDHA3-201ENST00000522353 PER1O15534 1290 aaPredicted RBP18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 SMCR8Q8TEV9 937 aaPredicted RBP18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 KLHDC4Q8TBB5 520 aa18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 PRIMPOLQ96LW4 560 aa18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 TNNQ9UQP3 1299 aa18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 HSP90AA4PQ58FG1 418 aa18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 CTR9Q6PD62 1173 aa18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 AOPEPQ8N6M6 819 aa18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 AZI2Q9H6S1 392 aa18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 ZNF772Q68DY9 489 aaPredicted RBP18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 PPP1R14CQ8TAE6 165 aa18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 SLC5A4Q9NY91 659 aa18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 DISP1Q96F81 1524 aa18.3■□□□□ 0.52
PCDHA3-201ENST00000522353 VWA3AA6NCI4 1184 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 PRDM1O75626 825 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 TUBB4AP04350 444 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 PHKG2P15735 406 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 KIF5AQ12840 1032 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 PRKG1Q13976 671 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 WDR44Q5JSH3 913 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 CCDC155Q8N6L0 562 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 BIRC3Q13489 604 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 NSMFQ6X4W1 530 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 AS3MTQ9HBK9 375 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 EXOC7Q9UPT5 735 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 ATP2B4P23634 1241 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 MAATS1Q7Z4T9 603 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 CPXCR1Q8N123 301 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 CCDC77Q9BR77 488 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 TMEM94Q12767 1356 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 RPS6KB1P23443 525 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 ARID5AQ03989 594 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 TCP10Q12799 353 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 EAPPQ56P03 285 aaPredicted RBP18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 QTRT2Q9H974 415 aaKnown RBP18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 V9GY48 417 aaPredicted RBP18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 KRT86O43790 486 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 ZNF174Q15697 407 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 MFSD14BQ5SR56 506 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 AKNAD1Q5T1N1 836 aa18.29■□□□□ 0.52
PCDHA3-201ENST00000522353 DCAF15Q66K64 600 aa18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 MYCLP12524 364 aaPredicted RBP18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 GTF2IP78347 998 aa18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 MAPKAPK5Q8IW41 473 aa18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 TTF2Q9UNY4 1162 aaKnown RBP18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 ARHGEF35A5YM69 484 aa18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 EPB41P11171 864 aaKnown RBP18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 PLCB3Q01970 1234 aa18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 KRT25Q7Z3Z0 450 aa18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 LLPHQ9BRT6 129 aaKnown RBP18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 CEP170Q5SW79 1584 aa18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 CCDC169A6NNP5 214 aa18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 CTSWP56202 376 aa18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 STRN3Q13033 797 aa18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 IQCGQ9H095 443 aaKnown RBP18.28■□□□□ 0.52
PCDHA3-201ENST00000522353 CHMP2AO43633 222 aa18.27■□□□□ 0.52
PCDHA3-201ENST00000522353 SKILP12757 684 aa18.27■□□□□ 0.52
PCDHA3-201ENST00000522353 ADCY7P51828 1080 aa18.27■□□□□ 0.52
PCDHA3-201ENST00000522353 MRPS9P82933 396 aaKnown RBP18.27■□□□□ 0.52
PCDHA3-201ENST00000522353 C2CD5Q86YS7 1000 aa18.27■□□□□ 0.52
PCDHA3-201ENST00000522353 CEP112Q8N8E3 955 aa18.27■□□□□ 0.52
PCDHA3-201ENST00000522353 DNAJC25Q9H1X3 360 aa18.27■□□□□ 0.52
PCDHA3-201ENST00000522353 YEATS2Q9ULM3 1422 aa18.27■□□□□ 0.52
PCDHA3-201ENST00000522353 BMS1Q14692 1282 aaKnown RBP18.27■□□□□ 0.52
PCDHA3-201ENST00000522353 CHURC1Q8WUH1 139 aa18.27■□□□□ 0.52
PCDHA3-201ENST00000522353 SPC25Q9HBM1 224 aa18.27■□□□□ 0.52
PCDHA3-201ENST00000522353 ADGRL2O95490 1459 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms