RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 AGPSO00116 658 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 LMOD1P29536 600 aaPredicted RBP13.7□□□□□ -0.22
SPIDR-217ENST00000522117 GGCXP38435 758 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 RAB27AP51159 221 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 SLC8A3P57103 927 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 CEBPZQ03701 1054 aaKnown RBP13.7□□□□□ -0.22
SPIDR-217ENST00000522117 PTPN21Q16825 1174 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 RCSD1Q6JBY9 416 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 VCPKMTQ9H867 229 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 PNPLA6Q8IY17 1366 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 TMEM232C9JQI7 657 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 KIAA0754O94854 1291 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 PTH1RQ03431 593 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 CCDC40Q4G0X9 1142 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 B4GALNT4Q76KP1 1039 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 CEP57Q86XR8 500 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 MAGEC3Q8TD91 643 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 FTOQ9C0B1 505 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPIDR-217ENST00000522117 SLC40A1Q9NP59 571 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 CFAP45Q9UL16 551 aa13.7□□□□□ -0.22
SPIDR-217ENST00000522117 TUBBP07437 444 aa13.69□□□□□ -0.22
SPIDR-217ENST00000522117 GNGT1P63211 74 aa13.69□□□□□ -0.22
SPIDR-217ENST00000522117 SETDB1Q15047 1291 aa13.69□□□□□ -0.22
SPIDR-217ENST00000522117 PRPF40BQ6NWY9 871 aaKnown RBP13.69□□□□□ -0.22
SPIDR-217ENST00000522117 KLHL23Q8NBE8 558 aa13.69□□□□□ -0.22
SPIDR-217ENST00000522117 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.69□□□□□ -0.22
SPIDR-217ENST00000522117 NPHP4O75161 1426 aaPredicted RBP13.69□□□□□ -0.22
SPIDR-217ENST00000522117 FAM163BP0C2L3 166 aa13.69□□□□□ -0.22
SPIDR-217ENST00000522117 TTLL7Q6ZT98 887 aa13.69□□□□□ -0.22
SPIDR-217ENST00000522117 NOA1Q8NC60 698 aaKnown RBP13.69□□□□□ -0.22
SPIDR-217ENST00000522117 DESI2Q9BSY9 194 aa13.69□□□□□ -0.22
SPIDR-217ENST00000522117 ESF1Q9H501 851 aaKnown RBP13.69□□□□□ -0.22
SPIDR-217ENST00000522117 NEDD4P46934 1319 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 ARHGAP25P42331 645 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 ARMC3Q5W041 872 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 YTHDF3Q7Z739 585 aaKnown RBP13.68□□□□□ -0.22
SPIDR-217ENST00000522117 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
SPIDR-217ENST00000522117 FSIP1Q8NA03 581 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 LMBR1Q8WVP7 490 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 SH3GL2Q99962 352 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 GGNBP2Q9H3C7 697 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 KIAA1468Q9P260 1216 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 UBASH3AP57075 661 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 TBX2Q13207 712 aaPredicted RBP13.68□□□□□ -0.22
SPIDR-217ENST00000522117 STIM1Q13586 685 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 PLCB4Q15147 1175 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 SNCBQ16143 134 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 GET4Q7L5D6 327 aaPredicted RBP13.68□□□□□ -0.22
SPIDR-217ENST00000522117 FMR1NBQ8N0W7 255 aaPredicted RBP13.68□□□□□ -0.22
SPIDR-217ENST00000522117 DRAXINQ8NBI3 349 aaPredicted RBP13.68□□□□□ -0.22
SPIDR-217ENST00000522117 SPDL1Q96EA4 605 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 CENPHQ9H3R5 247 aa13.68□□□□□ -0.22
SPIDR-217ENST00000522117 STX10O60499 249 aa13.67□□□□□ -0.22
SPIDR-217ENST00000522117 PFKFB2O60825 505 aa13.67□□□□□ -0.22
SPIDR-217ENST00000522117 TOP1P11387 765 aaKnown RBP13.67□□□□□ -0.22
SPIDR-217ENST00000522117 PEX19P40855 299 aa13.67□□□□□ -0.22
SPIDR-217ENST00000522117 KCNB1Q14721 858 aa13.67□□□□□ -0.22
SPIDR-217ENST00000522117 SPATS2Q86XZ4 545 aaKnown RBP13.67□□□□□ -0.22
SPIDR-217ENST00000522117 CCDC13Q8IYE1 715 aa13.67□□□□□ -0.22
SPIDR-217ENST00000522117 SPDYE1Q8NFV5 336 aaPredicted RBP13.67□□□□□ -0.22
SPIDR-217ENST00000522117 EZRP15311 586 aaKnown RBP13.67□□□□□ -0.22
SPIDR-217ENST00000522117 MFSD4BQ5TF39 518 aa13.67□□□□□ -0.22
SPIDR-217ENST00000522117 C3orf20Q8ND61 904 aa13.67□□□□□ -0.22
SPIDR-217ENST00000522117 PI4K2BQ8TCG2 481 aa13.67□□□□□ -0.22
SPIDR-217ENST00000522117 COG1Q8WTW3 980 aa13.67□□□□□ -0.22
SPIDR-217ENST00000522117 PAGR1Q9BTK6 254 aa13.67□□□□□ -0.22
SPIDR-217ENST00000522117 NLRP12P59046 1061 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 TUBB2AQ13885 445 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 TRIM74Q86UV6 250 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 TRIM73Q86UV7 250 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 CADPS2Q86UW7 1296 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 PARP9Q8IXQ6 854 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 NME8Q8N427 588 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 ACRBPQ8NEB7 543 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 OR8K1Q8NGG5 319 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 BRF1Q92994 677 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 SAAL1Q96ER3 474 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 TUBB2BQ9BVA1 445 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 PNMA6EA0A0J9YXQ4 647 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 A0A0U1RQJ8 604 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 ENO4A6NNW6 628 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 IKBKBO14920 756 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 CBFA2T2O43439 604 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 PPP1R12BO60237 982 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-217ENST00000522117 PRPHP41219 470 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 PDCD2Q16342 344 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-217ENST00000522117 TC2NQ8N9U0 490 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 ATRIPQ8WXE1 791 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 INTS13Q9NVM9 706 aa13.66□□□□□ -0.22
SPIDR-217ENST00000522117 CPSF1Q10570 1443 aaKnown RBP13.66□□□□□ -0.22
SPIDR-217ENST00000522117 CTAGE15A4D2H0 777 aa13.65□□□□□ -0.22
SPIDR-217ENST00000522117 JAK2O60674 1132 aa13.65□□□□□ -0.22
SPIDR-217ENST00000522117 RAB11FIP3O75154 756 aa13.65□□□□□ -0.22
SPIDR-217ENST00000522117 CTAGE8P0CG41 777 aa13.65□□□□□ -0.22
SPIDR-217ENST00000522117 MTX1Q13505 466 aa13.65□□□□□ -0.22
SPIDR-217ENST00000522117 ZRSR2Q15696 482 aaKnown RBP13.65□□□□□ -0.22
SPIDR-217ENST00000522117 CTAGE6Q86UF2 777 aa13.65□□□□□ -0.22
SPIDR-217ENST00000522117 CTAGE4Q8IX94 777 aa13.65□□□□□ -0.22
SPIDR-217ENST00000522117 SDR16C5Q8N3Y7 309 aa13.65□□□□□ -0.22
SPIDR-217ENST00000522117 HOMER3Q9NSC5 361 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms