RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ANAPC16Q96DE5 110 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 MRFAP1L1Q96HT8 127 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 FERD3LQ96RJ6 166 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 TRIM55Q9BYV6 548 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 OSGEPQ9NPF4 335 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 ZNRF3Q9ULT6 936 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 PPT2Q9UMR5 302 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 CDK11AQ9UQ88 783 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 PPME1Q9Y570 386 aa7.92□□□□□ -1.14
HMGB1P46-201ENST00000520062 U2SURPO15042 1029 aaKnown RBP7.91□□□□□ -1.14
HMGB1P46-201ENST00000520062 CYP11A1P05108 521 aa7.91□□□□□ -1.14
HMGB1P46-201ENST00000520062 MCM4P33991 863 aa7.91□□□□□ -1.14
HMGB1P46-201ENST00000520062 HNRNPUQ00839 825 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMGB1P46-201ENST00000520062 FAM117BQ6P1L5 589 aa7.91□□□□□ -1.14
HMGB1P46-201ENST00000520062 GPR161Q8N6U8 529 aaKnown RBP7.91□□□□□ -1.14
HMGB1P46-201ENST00000520062 CRBNQ96SW2 442 aa7.91□□□□□ -1.14
HMGB1P46-201ENST00000520062 EHMT1Q9H9B1 1298 aa7.91□□□□□ -1.14
HMGB1P46-201ENST00000520062 BRMS1Q9HCU9 246 aa7.91□□□□□ -1.14
HMGB1P46-201ENST00000520062 STARD13Q9Y3M8 1113 aa7.91□□□□□ -1.14
HMGB1P46-201ENST00000520062 R3HCC1Q9Y3T6 440 aaKnown RBP7.91□□□□□ -1.14
HMGB1P46-201ENST00000520062 LCE2BO14633 110 aa7.9□□□□□ -1.14
HMGB1P46-201ENST00000520062 ATE1O95260 518 aa7.9□□□□□ -1.14
HMGB1P46-201ENST00000520062 EPXP11678 715 aa7.9□□□□□ -1.14
HMGB1P46-201ENST00000520062 BAG6P46379 1132 aa7.9□□□□□ -1.14
HMGB1P46-201ENST00000520062 SRSF11Q05519 484 aaKnown RBP7.9□□□□□ -1.14
HMGB1P46-201ENST00000520062 C19orf57Q0VDD7 668 aa7.9□□□□□ -1.14
HMGB1P46-201ENST00000520062 SDE2Q6IQ49 451 aa7.9□□□□□ -1.14
HMGB1P46-201ENST00000520062 CCDC81Q6ZN84 652 aa7.9□□□□□ -1.14
HMGB1P46-201ENST00000520062 IL22RA1Q8N6P7 574 aa7.9□□□□□ -1.14
HMGB1P46-201ENST00000520062 JPH1Q9HDC5 661 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P46-201ENST00000520062 KRT82Q9NSB4 513 aa7.9□□□□□ -1.14
HMGB1P46-201ENST00000520062 SMAD7O15105 426 aaKnown RBP7.89□□□□□ -1.15
HMGB1P46-201ENST00000520062 NCLP19338 710 aaKnown RBP7.89□□□□□ -1.15
HMGB1P46-201ENST00000520062 AFF1P51825 1210 aaKnown RBP7.89□□□□□ -1.15
HMGB1P46-201ENST00000520062 GSTM4Q03013 218 aa7.89□□□□□ -1.15
HMGB1P46-201ENST00000520062 MAP1SQ66K74 1059 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P46-201ENST00000520062 NUDT8Q8WV74 236 aa7.89□□□□□ -1.15
HMGB1P46-201ENST00000520062 HNRNPLLQ8WVV9 542 aaKnown RBP7.89□□□□□ -1.15
HMGB1P46-201ENST00000520062 NRSN2Q9GZP1 204 aa7.89□□□□□ -1.15
HMGB1P46-201ENST00000520062 PRDM6Q9NQX0 595 aa7.89□□□□□ -1.15
HMGB1P46-201ENST00000520062 LILRB5O75023 590 aa7.88□□□□□ -1.15
HMGB1P46-201ENST00000520062 ALBP02768 609 aa7.88□□□□□ -1.15
HMGB1P46-201ENST00000520062 PTPN11Q06124 597 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P46-201ENST00000520062 GK5Q6ZS86 529 aa7.88□□□□□ -1.15
HMGB1P46-201ENST00000520062 CORO1BQ9BR76 489 aa7.88□□□□□ -1.15
HMGB1P46-201ENST00000520062 COL25A1Q9BXS0 654 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P46-201ENST00000520062 TACC3Q9Y6A5 838 aa7.88□□□□□ -1.15
HMGB1P46-201ENST00000520062 PRR36Q9H6K5 1346 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 CLCQ05315 142 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 POU4F3Q15319 338 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 RNFT1Q5M7Z0 435 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 HP1BP3Q5SSJ5 553 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 WFDC8Q8IUA0 241 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 MAP4K3Q8IVH8 894 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 C19orf47Q8N9M1 422 aaKnown RBP7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 KLHL23Q8NBE8 558 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 SLC7A3Q8WY07 619 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 KCNB2Q92953 911 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 LRRC4BQ9NT99 713 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 ACTR10Q9NZ32 417 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 POLR3KQ9Y2Y1 108 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 PCDHB14Q9Y5E9 798 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 SNCAIPQ9Y6H5 919 aa7.87□□□□□ -1.15
HMGB1P46-201ENST00000520062 FSCN2O14926 492 aa7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 CASP7P55210 303 aa7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 RASA3Q14644 834 aa7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 LRRFIP1Q32MZ4 808 aaKnown RBP7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 FBXW10Q5XX13 1052 aa7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 JAZF1Q86VZ6 243 aa7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 NLGN1Q8N2Q7 840 aa7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 FAM169BQ8N8A8 192 aa7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 GPBAR1Q8TDU6 330 aa7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 SRPK1Q96SB4 655 aaKnown RBP7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 CCDC113Q9H0I3 377 aa7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 MSRB2Q9Y3D2 182 aa7.86□□□□□ -1.15
HMGB1P46-201ENST00000520062 MEIS3P2A8K0S8 358 aa7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 LINC01387J3KSC0 135 aa7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 GFRA2O00451 464 aa7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 HGSNATQ68CP4 663 aa7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 MSL1Q68DK7 614 aa7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 MPRIPQ6WCQ1 1025 aa7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 LSRQ86X29 649 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 ACDQ96AP0 544 aa7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 ACSBG1Q96GR2 724 aa7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 DEPDC7Q96QD5 511 aa7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 SNTG2Q9NY99 539 aa7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 PCDHA4Q9UN74 947 aa7.85□□□□□ -1.15
HMGB1P46-201ENST00000520062 M0R082 166 aa7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 MAOBP27338 520 aa7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 CDC25BP30305 580 aa7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 SUZ12Q15022 739 aaKnown RBP7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 DDR2Q16832 855 aa7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 EGFLAMQ63HQ2 1017 aa7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 TXNDC11Q6PKC3 985 aa7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 CHSY3Q70JA7 882 aa7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 HDXQ7Z353 690 aa7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 ZNF417Q8TAU3 575 aa7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 DCAF11Q8TEB1 546 aa7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 EDARADDQ8WWZ3 215 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms