RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 RAD21O60216 631 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 EIF5BO60841 1220 aaKnown RBP3.59□□□□□ -1.83
MCF2-208ENST00000519895 ZIC2O95409 532 aaPredicted RBP3.59□□□□□ -1.83
MCF2-208ENST00000519895 SEC24BO95487 1268 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 CASP7P55210 303 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 TWISTNBQ3B726 338 aaPredicted RBP3.59□□□□□ -1.83
MCF2-208ENST00000519895 RABL6Q3YEC7 729 aaPredicted RBP3.59□□□□□ -1.83
MCF2-208ENST00000519895 C7orf61Q8IZ16 206 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 GPR161Q8N6U8 529 aaKnown RBP3.59□□□□□ -1.83
MCF2-208ENST00000519895 ADAM32Q8TC27 787 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 CD99L2Q8TCZ2 262 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 UIMC1Q96RL1 719 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 GPRC5DQ9NZD1 345 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 RALYQ9UKM9 306 aaKnown RBP3.59□□□□□ -1.83
MCF2-208ENST00000519895 SPEF2Q9C093 1822 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 USP24Q9UPU5 2620 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 TK2O00142 265 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 KCNQ4P56696 695 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 FLIIQ13045 1269 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 PDE3AQ14432 1141 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 CCDC93Q567U6 631 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 HDGFL1Q5TGJ6 251 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 POTEEQ6S8J3 1075 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 RTKN2Q8IZC4 609 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 GLIS3Q8NEA6 775 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 C7orf43Q8WVR3 580 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 UTP14AQ9BVJ6 771 aaKnown RBP3.59□□□□□ -1.83
MCF2-208ENST00000519895 USP16Q9Y5T5 823 aa3.59□□□□□ -1.83
MCF2-208ENST00000519895 ADGRA2Q96PE1 1338 aa3.59□□□□□ -1.84
MCF2-208ENST00000519895 NFIXQ14938 502 aa3.59□□□□□ -1.84
MCF2-208ENST00000519895 GRIN2CQ14957 1233 aa3.59□□□□□ -1.84
MCF2-208ENST00000519895 SOWAHCQ53LP3 525 aaPredicted RBP3.59□□□□□ -1.84
MCF2-208ENST00000519895 ERICH6BQ5W0A0 696 aa3.59□□□□□ -1.84
MCF2-208ENST00000519895 U2AF1L4Q8WU68 220 aaKnown RBP3.59□□□□□ -1.84
MCF2-208ENST00000519895 NKD2Q969F2 451 aaPredicted RBP3.59□□□□□ -1.84
MCF2-208ENST00000519895 RBM17Q96I25 401 aaKnown RBP3.59□□□□□ -1.84
MCF2-208ENST00000519895 SETDB2Q96T68 719 aa3.59□□□□□ -1.84
MCF2-208ENST00000519895 RTKNQ9BST9 563 aa3.59□□□□□ -1.84
MCF2-208ENST00000519895 MRIQ9BWK5 157 aa3.59□□□□□ -1.84
MCF2-208ENST00000519895 KDM4CQ9H3R0 1056 aa3.59□□□□□ -1.84
MCF2-208ENST00000519895 WDR70Q9NW82 654 aa3.59□□□□□ -1.84
MCF2-208ENST00000519895 MTMR7Q9Y216 660 aa3.59□□□□□ -1.84
MCF2-208ENST00000519895 SLX4Q8IY92 1834 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 ZFHX4Q86UP3 3567 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 PDE8AO60658 829 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 CIAO1O76071 339 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 SERPINB2P05120 415 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 OTUD7BQ6GQQ9 843 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 NLRP10Q86W26 655 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 PHF12Q96QT6 1004 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 CDC5LQ99459 802 aaKnown RBP3.58□□□□□ -1.84
MCF2-208ENST00000519895 UPF3BQ9BZI7 483 aaKnown RBP3.58□□□□□ -1.84
MCF2-208ENST00000519895 GPR108Q9NPR9 543 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 CCL5P13501 91 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 DDR1Q08345 913 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 NEXNQ0ZGT2 675 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 BEND3Q5T5X7 828 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 C2CD5Q86YS7 1000 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 CWC25Q9NXE8 425 aaPredicted RBP3.58□□□□□ -1.84
MCF2-208ENST00000519895 LHX6Q9UPM6 363 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 SUGT1Q9Y2Z0 365 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 ECM29Q5VYK3 1845 aa3.58□□□□□ -1.84
MCF2-208ENST00000519895 KCNQ3O43525 872 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 PHF14O94880 888 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 SRGNP10124 158 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 IARSP41252 1262 aaKnown RBP3.57□□□□□ -1.84
MCF2-208ENST00000519895 EPS15P42566 896 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 NT5C2P49902 561 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 ATN1P54259 1190 aaPredicted RBP3.57□□□□□ -1.84
MCF2-208ENST00000519895 CCDC184Q52MB2 194 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 FOXD4L5Q5VV16 416 aaPredicted RBP3.57□□□□□ -1.84
MCF2-208ENST00000519895 PRR5LQ6MZQ0 368 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 HFE2Q6ZVN8 426 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 GJD3Q8N144 294 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.57□□□□□ -1.84
MCF2-208ENST00000519895 FOXD4L4Q8WXT5 416 aaPredicted RBP3.57□□□□□ -1.84
MCF2-208ENST00000519895 DNAAF4Q8WXU2 420 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 ZNF512BQ96KM6 892 aaPredicted RBP3.57□□□□□ -1.84
MCF2-208ENST00000519895 PRKAG3Q9UGI9 489 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 STK24Q9Y6E0 443 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 PLEKHG5O94827 1062 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 RARSP54136 660 aaKnown RBP3.57□□□□□ -1.84
MCF2-208ENST00000519895 SLC39A6Q13433 755 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 USPL1Q5W0Q7 1092 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 SMYD5Q6GMV2 418 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 C8orf58Q8NAV2 365 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 SYTL4Q96C24 671 aaPredicted RBP3.57□□□□□ -1.84
MCF2-208ENST00000519895 MS4A3Q96HJ5 214 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 FSD1Q9BTV5 496 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 ANKRD2Q9GZV1 360 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 ZMYND8Q9ULU4 1186 aaPredicted RBP3.57□□□□□ -1.84
MCF2-208ENST00000519895 MED23Q9ULK4 1368 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 NEURL1BA8MQ27 555 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 GNAI3P08754 354 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 GRAPQ13588 217 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 IFNL1Q8IU54 200 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 CNBD1Q8NA66 436 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 GRAPLQ8TC17 118 aaPredicted RBP3.57□□□□□ -1.84
MCF2-208ENST00000519895 XAGE3Q8WTP9 111 aa3.57□□□□□ -1.84
MCF2-208ENST00000519895 TRIM47Q96LD4 638 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms