RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 LDHCP07864 332 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 HSPA1LP34931 641 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 ZNF75DP51815 510 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 RBM6P78332 1123 aaKnown RBP12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 PI16Q6UXB8 463 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 JAG2Q9Y219 1238 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 KRT18P05783 430 aaKnown RBP12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 PDE6AP16499 860 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 RBM5P52756 815 aaKnown RBP eCLIP12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 SLFNL1Q499Z3 407 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 KRT40Q6A162 431 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 CAGE1Q8TC20 777 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 C6orf229H3BNL8 230 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 CBX1P83916 185 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 ZSCAN29Q8IWY8 852 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 KRI1Q8N9T8 703 aaKnown RBP12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 OSBP2Q969R2 916 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 ZBTB1Q9Y2K1 713 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 ZNF500O60304 480 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 SEPT12Q8IYM1 358 aa12.91□□□□□ -0.34
PCDHGB4-201ENST00000519479 ADD1P35611 737 aaKnown RBP12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 MYSM1Q5VVJ2 828 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 NSUN7Q8NE18 718 aaKnown RBP12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 ZHX3Q9H4I2 956 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 ATG3Q9NT62 314 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 ELP1O95163 1332 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 M0R2C6 588 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 ZNF202O95125 648 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 PDE8BO95263 885 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 APBA3O96018 575 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 PHKA1P46020 1223 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 EIF5P55010 431 aaKnown RBP12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 DHX58Q96C10 678 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 PRDM1O75626 825 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
PCDHGB4-201ENST00000519479 PXDNLA1KZ92 1463 aa12.9□□□□□ -0.35
PCDHGB4-201ENST00000519479 RTL9Q8NET4 1388 aa12.9□□□□□ -0.35
PCDHGB4-201ENST00000519479 BMP15O95972 392 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 UBA7P41226 1012 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 TOB2Q14106 344 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 DIS3L2Q8IYB7 885 aaKnown RBP12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 CABP5Q9NP86 173 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 MCM9Q9NXL9 1143 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 TMX1Q9H3N1 280 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 SIK1P57059 783 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 HSP90B2PQ58FF3 399 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 TMEM87AQ8NBN3 555 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 PIGBQ92521 554 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 GJD4Q96KN9 370 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 TANGO6Q9C0B7 1094 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 TCEAL9Q9UHQ7 104 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 PARP3Q9Y6F1 533 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 USP42Q9H9J4 1324 aaKnown RBP12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 MPHOSPH10O00566 681 aaKnown RBP12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 YEATS4O95619 227 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 POLD1P28340 1107 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 PPP4R3BQ5MIZ7 849 aa12.89□□□□□ -0.35
PCDHGB4-201ENST00000519479 PATL2C9JE40 543 aaKnown RBP12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 ADALQ6DHV7 355 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 TSPY3P0CV98 308 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 TSPY8P0CW00 308 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 CALM1P0DP23 149 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 CALM2P0DP24 149 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 CALM3P0DP25 149 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 RILPL1Q5EBL4 403 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 AKNAD1Q5T1N1 836 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 KCNH3Q9ULD8 1083 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 DENND2AQ9ULE3 1009 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 CTDP1Q9Y5B0 961 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 ZNF142P52746 1687 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 NBPF26B4DH59 902 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 DEXIO95424 95 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 SPECC1Q5M775 1068 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 NBPF10Q6P3W6 841 aaKnown RBP12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 NBPF15Q8N660 670 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 FTOQ9C0B1 505 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 KRT2P35908 639 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 MYL5Q02045 173 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 NLRP10Q86W26 655 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 PUS7LQ9H0K6 701 aaKnown RBP12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 DEF6Q9H4E7 631 aa12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 BMP2KQ9NSY1 1161 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB4-201ENST00000519479 BCAMP50895 628 aa12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 BARGINQ6ZT62 677 aa12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 FBXO18Q8NFZ0 1043 aa12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 NUP88Q99567 741 aaPredicted RBP12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 CASQ1P31415 396 aa12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 IFNL3Q8IZI9 196 aa12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 TCP11L1Q9NUJ3 509 aa12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 PCDHA7Q9UN72 937 aa12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 KCNJ14Q9UNX9 436 aa12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 MRVI1Q9Y6F6 885 aa12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 IL6STP40189 918 aaPredicted RBP12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 CGNQ9P2M7 1197 aaKnown RBP12.87□□□□□ -0.35
PCDHGB4-201ENST00000519479 KIF5CO60282 957 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms