RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 AKAP4Q5JQC9 854 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 TTC39BQ5VTQ0 682 aaPredicted RBP6.29□□□□□ -1.4
AP3B1-204ENST00000519295 LRP10Q7Z4F1 713 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 BCL2L12Q9HB09 334 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 LGR6Q9HBX8 967 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 UTP6Q9NYH9 597 aaKnown RBP6.29□□□□□ -1.4
AP3B1-204ENST00000519295 PHIPQ8WWQ0 1821 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 TATP17735 454 aaPredicted RBP6.29□□□□□ -1.4
AP3B1-204ENST00000519295 PRIM1P49642 420 aaKnown RBP6.29□□□□□ -1.4
AP3B1-204ENST00000519295 CYP4A11Q02928 519 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 ALDH1L2Q3SY69 923 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 FAM117BQ6P1L5 589 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 ST20-MTHFSA0A0A6YYL1 179 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 LOC102724428A0A0B4J2F2 783 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 POTECB2RU33 542 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 MPHOSPH10O00566 681 aaKnown RBP6.29□□□□□ -1.4
AP3B1-204ENST00000519295 SIK1P57059 783 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 STYK1Q6J9G0 422 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 PCDHGB3Q9Y5G1 929 aa6.29□□□□□ -1.4
AP3B1-204ENST00000519295 FOXD2O60548 495 aaPredicted RBP6.28□□□□□ -1.4
AP3B1-204ENST00000519295 RPS6KA3P51812 740 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 ANKRD39Q53RE8 183 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 CLIP3Q96DZ5 547 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 RBM17Q96I25 401 aaKnown RBP6.28□□□□□ -1.4
AP3B1-204ENST00000519295 CFHR5Q9BXR6 569 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 DDX49Q9Y6V7 483 aaKnown RBP6.28□□□□□ -1.4
AP3B1-204ENST00000519295 COL15A1P39059 1388 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 LILRB3O75022 631 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 USP2O75604 605 aaPredicted RBP6.28□□□□□ -1.4
AP3B1-204ENST00000519295 ATP2B1P20020 1258 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 CRY2Q49AN0 593 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 NEUROD6Q96NK8 337 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 RTFDC1Q9BY42 306 aaPredicted RBP6.28□□□□□ -1.4
AP3B1-204ENST00000519295 PLSCR2Q9NRY7 297 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 CCNL1Q9UK58 526 aaPredicted RBP6.28□□□□□ -1.4
AP3B1-204ENST00000519295 SPO11Q9Y5K1 396 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 SPEF2Q9C093 1822 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 NUTM2FA1L443 756 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 TERF2Q15554 542 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 CDCA2Q69YH5 1023 aaPredicted RBP6.28□□□□□ -1.4
AP3B1-204ENST00000519295 PDXDC2PQ6P474 469 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 ZSCAN30Q86W11 494 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 ZBTB10Q96DT7 871 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 RMI1Q9H9A7 625 aa6.28□□□□□ -1.4
AP3B1-204ENST00000519295 SPTLC2O15270 562 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 CYP19A1P11511 503 aaPredicted RBP6.27□□□□□ -1.41
AP3B1-204ENST00000519295 ABL2P42684 1182 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 TAF7Q15545 349 aaPredicted RBP6.27□□□□□ -1.41
AP3B1-204ENST00000519295 FAM182BQ5T319 152 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 NUCKS1Q9H1E3 243 aaKnown RBP6.27□□□□□ -1.41
AP3B1-204ENST00000519295 LCMT1Q9UIC8 334 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 SQORQ9Y6N5 450 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 DDX60LQ5H9U9 1706 aaKnown RBP6.27□□□□□ -1.41
AP3B1-204ENST00000519295 TOMM70O94826 608 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 PRELPP51888 382 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 ANKRD45Q5TZF3 282 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 SLC7A5P2Q9GIP4 190 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 CHCHD3Q9NX63 227 aaKnown RBP6.27□□□□□ -1.41
AP3B1-204ENST00000519295 NARFQ9UHQ1 456 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 ARHGAP33O14559 1287 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 SLC34A2O95436 690 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 MS4A1P11836 297 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 RPL17P18621 184 aaKnown RBP6.27□□□□□ -1.41
AP3B1-204ENST00000519295 HSP90B2PQ58FF3 399 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 MUM1L1Q5H9M0 696 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 DPH6Q7L8W6 267 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 SLF2Q8IX21 1173 aa6.27□□□□□ -1.41
AP3B1-204ENST00000519295 MRRFQ96E11 262 aaKnown RBP6.27□□□□□ -1.41
AP3B1-204ENST00000519295 ECM2O94769 699 aaPredicted RBP6.26□□□□□ -1.41
AP3B1-204ENST00000519295 BAIAP3O94812 1187 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 CPP00450 1065 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 GABPB1Q06547 395 aaPredicted RBP6.26□□□□□ -1.41
AP3B1-204ENST00000519295 PLEKHG6Q3KR16 790 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 AK7Q96M32 723 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 FAM117AQ9C073 453 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 AVENQ9NQS1 362 aaPredicted RBP6.26□□□□□ -1.41
AP3B1-204ENST00000519295 FRMPD3Q5JV73 1810 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 FRAT2O75474 233 aaPredicted RBP6.26□□□□□ -1.41
AP3B1-204ENST00000519295 OTUD6AQ7L8S5 288 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 PACS2Q86VP3 889 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 GOLGA1Q92805 767 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 SENP3Q9H4L4 574 aaPredicted RBP6.26□□□□□ -1.41
AP3B1-204ENST00000519295 PANK3Q9H999 370 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 SLC52A2Q9HAB3 445 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 GPCPD1Q9NPB8 672 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 TMOD4Q9NZQ9 345 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 PRR12Q9ULL5 1215 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 CNTNAP1P78357 1384 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 CARMIL3Q8ND23 1372 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 GZMAP12544 262 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 SAFB2Q14151 953 aaKnown RBP eCLIP6.26□□□□□ -1.41
AP3B1-204ENST00000519295 PPP2R5BQ15173 497 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 SKAP1Q86WV1 359 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 SLC43A3Q8NBI5 491 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 KLRG1Q96E93 195 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 SIN3AQ96ST3 1273 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 ENAMQ9NRM1 1142 aa6.26□□□□□ -1.41
AP3B1-204ENST00000519295 RTL9Q8NET4 1388 aa6.25□□□□□ -1.41
AP3B1-204ENST00000519295 FMNL1O95466 1100 aaPredicted RBP6.25□□□□□ -1.41
AP3B1-204ENST00000519295 EGLN2Q96KS0 407 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms