RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 TAF1DQ9H5J8 278 aaPredicted RBP25.64■■□□□ 1.7
PCM1-210ENST00000518936 TNNI2P48788 182 aa25.63■■□□□ 1.69
PCM1-210ENST00000518936 MCMDC2Q4G0Z9 681 aa25.63■■□□□ 1.69
PCM1-210ENST00000518936 FKBP1CQ5VVH2 108 aa25.63■■□□□ 1.69
PCM1-210ENST00000518936 APOBEC3FQ8IUX4 373 aaKnown RBP25.63■■□□□ 1.69
PCM1-210ENST00000518936 CRNKL1Q9BZJ0 848 aaKnown RBP25.63■■□□□ 1.69
PCM1-210ENST00000518936 PITPNM2Q9BZ72 1349 aa25.63■■□□□ 1.69
PCM1-210ENST00000518936 RPAP1Q9BWH6 1393 aaPredicted RBP25.62■■□□□ 1.69
PCM1-210ENST00000518936 WNT10BO00744 389 aa25.62■■□□□ 1.69
PCM1-210ENST00000518936 TBC1D10BQ4KMP7 808 aaPredicted RBP25.62■■□□□ 1.69
PCM1-210ENST00000518936 RBM26Q5T8P6 1007 aaKnown RBP25.61■■□□□ 1.69
PCM1-210ENST00000518936 APOBEC3HQ6NTF7 200 aaKnown RBP25.61■■□□□ 1.69
PCM1-210ENST00000518936 ZBED3Q96IU2 234 aaPredicted RBP25.61■■□□□ 1.69
PCM1-210ENST00000518936 RRAGCQ9HB90 399 aa25.61■■□□□ 1.69
PCM1-210ENST00000518936 NPM3O75607 178 aaKnown RBP25.6■■□□□ 1.69
PCM1-210ENST00000518936 CHMLP26374 656 aa25.6■■□□□ 1.69
PCM1-210ENST00000518936 SAMD7Q7Z3H4 446 aa25.6■■□□□ 1.69
PCM1-210ENST00000518936 SKAP1Q86WV1 359 aa25.6■■□□□ 1.69
PCM1-210ENST00000518936 ZNF384Q8TF68 577 aa25.6■■□□□ 1.69
PCM1-210ENST00000518936 USP40Q9NVE5 1235 aa25.6■■□□□ 1.69
PCM1-210ENST00000518936 AATFQ9NY61 560 aaKnown RBP eCLIP25.6■■□□□ 1.69
PCM1-210ENST00000518936 AMOTL1Q8IY63 956 aa25.59■■□□□ 1.69
PCM1-210ENST00000518936 TEX11Q8IYF3 940 aa25.59■■□□□ 1.69
PCM1-210ENST00000518936 DCPSQ96C86 337 aaKnown RBP25.59■■□□□ 1.69
PCM1-210ENST00000518936 NACAP1Q9BZK3 213 aa25.59■■□□□ 1.69
PCM1-210ENST00000518936 PPP2R3BQ9Y5P8 575 aa25.59■■□□□ 1.69
PCM1-210ENST00000518936 SPDYE2Q495Y8 402 aa25.58■■□□□ 1.69
PCM1-210ENST00000518936 EAPPQ56P03 285 aaPredicted RBP25.58■■□□□ 1.69
PCM1-210ENST00000518936 CWC27Q6UX04 472 aaKnown RBP25.58■■□□□ 1.69
PCM1-210ENST00000518936 MIGA1Q8NAN2 632 aa25.58■■□□□ 1.69
PCM1-210ENST00000518936 PRMT6Q96LA8 375 aaPredicted RBP25.58■■□□□ 1.69
PCM1-210ENST00000518936 MBD4O95243 580 aa25.57■■□□□ 1.68
PCM1-210ENST00000518936 NMIQ13287 307 aaPredicted RBP25.57■■□□□ 1.68
PCM1-210ENST00000518936 GIMAP6Q6P9H5 292 aa25.57■■□□□ 1.68
PCM1-210ENST00000518936 KIAA1211Q6ZU35 1233 aa25.57■■□□□ 1.68
PCM1-210ENST00000518936 LDHDQ86WU2 507 aa25.57■■□□□ 1.68
PCM1-210ENST00000518936 ZNF526Q8TF50 670 aaPredicted RBP25.57■■□□□ 1.68
PCM1-210ENST00000518936 OSBP2Q969R2 916 aa25.57■■□□□ 1.68
PCM1-210ENST00000518936 HOOK2Q96ED9 719 aa25.57■■□□□ 1.68
PCM1-210ENST00000518936 IDI2Q9BXS1 227 aa25.57■■□□□ 1.68
PCM1-210ENST00000518936 ATP8A2Q9NTI2 1148 aa25.57■■□□□ 1.68
PCM1-210ENST00000518936 GPAA1O43292 621 aa25.56■■□□□ 1.68
PCM1-210ENST00000518936 USP5P45974 858 aa25.56■■□□□ 1.68
PCM1-210ENST00000518936 CDC42EP5Q6NZY7 148 aa25.56■■□□□ 1.68
PCM1-210ENST00000518936 FAM83AQ86UY5 434 aa25.56■■□□□ 1.68
PCM1-210ENST00000518936 TRPM4Q8TD43 1214 aa25.56■■□□□ 1.68
PCM1-210ENST00000518936 RIOK1Q9BRS2 568 aaKnown RBP25.56■■□□□ 1.68
PCM1-210ENST00000518936 PUS7LQ9H0K6 701 aaKnown RBP25.56■■□□□ 1.68
PCM1-210ENST00000518936 TDRD3Q9H7E2 651 aaKnown RBP25.56■■□□□ 1.68
PCM1-210ENST00000518936 ZNF70Q9UC06 446 aaPredicted RBP25.56■■□□□ 1.68
PCM1-210ENST00000518936 CCDC171Q6TFL3 1326 aa25.56■■□□□ 1.68
PCM1-210ENST00000518936 POTECB2RU33 542 aa25.55■■□□□ 1.68
PCM1-210ENST00000518936 ENTPD3O75355 529 aa25.55■■□□□ 1.68
PCM1-210ENST00000518936 NBPF9Q3BBW0 867 aa25.55■■□□□ 1.68
PCM1-210ENST00000518936 ADGRA1Q86SQ6 560 aa25.55■■□□□ 1.68
PCM1-210ENST00000518936 SULF1Q8IWU6 871 aa25.55■■□□□ 1.68
PCM1-210ENST00000518936 VEZTQ9HBM0 779 aa25.55■■□□□ 1.68
PCM1-210ENST00000518936 TAOK2Q9UL54 1235 aa25.55■■□□□ 1.68
PCM1-210ENST00000518936 CLEC11AQ9Y240 323 aa25.55■■□□□ 1.68
PCM1-210ENST00000518936 STRBPQ96SI9 672 aaKnown RBP25.54■■□□□ 1.68
PCM1-210ENST00000518936 PGAP2Q9UHJ9 254 aa25.54■■□□□ 1.68
PCM1-210ENST00000518936 SHTN1A0MZ66 631 aa25.53■■□□□ 1.68
PCM1-210ENST00000518936 REC8O95072 547 aa25.53■■□□□ 1.68
PCM1-210ENST00000518936 RHBDL3P58872 404 aa25.53■■□□□ 1.68
PCM1-210ENST00000518936 FAM227BQ96M60 508 aa25.53■■□□□ 1.68
PCM1-210ENST00000518936 DHX36Q9H2U1 1008 aaKnown RBP25.53■■□□□ 1.68
PCM1-210ENST00000518936 NMRK2Q9NPI5 230 aa25.53■■□□□ 1.68
PCM1-210ENST00000518936 GGA3Q9NZ52 723 aa25.53■■□□□ 1.68
PCM1-210ENST00000518936 SLC4A4Q9Y6R1 1079 aa25.53■■□□□ 1.68
PCM1-210ENST00000518936 ADAMTSL1Q8N6G6 1762 aa25.52■■□□□ 1.68
PCM1-210ENST00000518936 FOCADQ5VW36 1801 aa25.52■■□□□ 1.68
PCM1-210ENST00000518936 A0A0D9SFI3 127 aa25.52■■□□□ 1.68
PCM1-210ENST00000518936 ANGEL2Q5VTE6 544 aaKnown RBP25.52■■□□□ 1.68
PCM1-210ENST00000518936 LCORLQ8N3X6 602 aa25.52■■□□□ 1.68
PCM1-210ENST00000518936 SH3RF3Q8TEJ3 882 aaPredicted RBP25.52■■□□□ 1.68
PCM1-210ENST00000518936 ARMT1Q9H993 441 aa25.52■■□□□ 1.68
PCM1-210ENST00000518936 COL2A1P02458 1487 aaPredicted RBP25.52■■□□□ 1.68
PCM1-210ENST00000518936 PATL2C9JE40 543 aaKnown RBP25.51■■□□□ 1.67
PCM1-210ENST00000518936 SGSM2O43147 1006 aa25.51■■□□□ 1.67
PCM1-210ENST00000518936 EPB41L2O43491 1005 aaKnown RBP25.51■■□□□ 1.67
PCM1-210ENST00000518936 APPP05067 770 aa25.51■■□□□ 1.67
PCM1-210ENST00000518936 CDC37L1Q7L3B6 337 aa25.51■■□□□ 1.67
PCM1-210ENST00000518936 FAM151AQ8WW52 585 aa25.51■■□□□ 1.67
PCM1-210ENST00000518936 CLRN2A0PK11 232 aa25.5■■□□□ 1.67
PCM1-210ENST00000518936 M0R2C6 588 aa25.5■■□□□ 1.67
PCM1-210ENST00000518936 ZMYM6O95789 1325 aa25.5■■□□□ 1.67
PCM1-210ENST00000518936 EGFRP00533 1210 aa25.5■■□□□ 1.67
PCM1-210ENST00000518936 HIRAP54198 1017 aaPredicted RBP25.5■■□□□ 1.67
PCM1-210ENST00000518936 DYNLL1P63167 89 aaKnown RBP25.5■■□□□ 1.67
PCM1-210ENST00000518936 ESYT1Q9BSJ8 1104 aa25.5■■□□□ 1.67
PCM1-210ENST00000518936 DSCC1Q9BVC3 393 aa25.5■■□□□ 1.67
PCM1-210ENST00000518936 CTNNA3Q9UI47 895 aa25.5■■□□□ 1.67
PCM1-210ENST00000518936 WDHD1O75717 1129 aaPredicted RBP25.49■■□□□ 1.67
PCM1-210ENST00000518936 HLA-DOAP06340 250 aa25.49■■□□□ 1.67
PCM1-210ENST00000518936 TGFBRAP1Q8WUH2 860 aa25.49■■□□□ 1.67
PCM1-210ENST00000518936 ARPP21Q9UBL0 812 aaPredicted RBP25.49■■□□□ 1.67
PCM1-210ENST00000518936 FLT1P17948 1338 aa25.48■■□□□ 1.67
PCM1-210ENST00000518936 NF2P35240 595 aa25.48■■□□□ 1.67
PCM1-210ENST00000518936 TDO2P48775 406 aa25.48■■□□□ 1.67
PCM1-210ENST00000518936 PICALMQ13492 652 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms