RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 DCTPP1Q9H773 170 aa19.47■□□□□ 0.71
ARHGEF28-212ENST00000513042 VIMP08670 466 aaKnown RBP19.47■□□□□ 0.71
ARHGEF28-212ENST00000513042 EVCP57679 992 aa19.47■□□□□ 0.71
ARHGEF28-212ENST00000513042 DDB1Q16531 1140 aa19.47■□□□□ 0.71
ARHGEF28-212ENST00000513042 ZWINTO95229 277 aa19.47■□□□□ 0.71
ARHGEF28-212ENST00000513042 SMC1BQ8NDV3 1235 aa19.47■□□□□ 0.71
ARHGEF28-212ENST00000513042 SETDB1Q15047 1291 aa19.47■□□□□ 0.71
ARHGEF28-212ENST00000513042 UTP14CQ5TAP6 766 aaKnown RBP19.47■□□□□ 0.71
ARHGEF28-212ENST00000513042 SMC5Q8IY18 1101 aa19.47■□□□□ 0.71
ARHGEF28-212ENST00000513042 MTUS1Q9ULD2 1270 aa19.47■□□□□ 0.71
ARHGEF28-212ENST00000513042 MAP3K5Q99683 1374 aa19.46■□□□□ 0.71
ARHGEF28-212ENST00000513042 RPS6KB1P23443 525 aa19.46■□□□□ 0.71
ARHGEF28-212ENST00000513042 IGSF22Q8N9C0 903 aa19.46■□□□□ 0.71
ARHGEF28-212ENST00000513042 MSANTD4Q8NCY6 345 aa19.46■□□□□ 0.71
ARHGEF28-212ENST00000513042 PARP3Q9Y6F1 533 aa19.46■□□□□ 0.71
ARHGEF28-212ENST00000513042 MYL5Q02045 173 aa19.46■□□□□ 0.71
ARHGEF28-212ENST00000513042 CCDC169A6NNP5 214 aa19.46■□□□□ 0.71
ARHGEF28-212ENST00000513042 KRBA2Q6ZNG9 492 aa19.46■□□□□ 0.71
ARHGEF28-212ENST00000513042 CNGA4Q8IV77 575 aa19.46■□□□□ 0.71
ARHGEF28-212ENST00000513042 TAF12Q16514 161 aa19.46■□□□□ 0.71
ARHGEF28-212ENST00000513042 NCOA5Q9HCD5 579 aaKnown RBP19.46■□□□□ 0.71
ARHGEF28-212ENST00000513042 TNRQ92752 1358 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 DDX39AO00148 427 aaKnown RBP19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 HGSO14964 777 aaPredicted RBP19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 SPOPO43791 374 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 VAMP4O75379 141 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 TNFAIP3P21580 790 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 FCHSD1Q86WN1 690 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 LINS1Q8NG48 757 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 DENND4BO75064 1496 aaPredicted RBP19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 SNX16P57768 344 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 IL2RBP14784 551 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 WDR44Q5JSH3 913 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 TPTE2Q6XPS3 522 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 CADPS2Q86UW7 1296 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 POLKQ9UBT6 870 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 RBSNQ9H1K0 784 aa19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 RTCBQ9Y3I0 505 aaKnown RBP19.45■□□□□ 0.7
ARHGEF28-212ENST00000513042 SLC27A2O14975 620 aa19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 TUBB4AP04350 444 aa19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 PLCG2P16885 1265 aa19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 FNBP1Q96RU3 617 aa19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 HELLSQ9NRZ9 838 aa19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 TFCP2L1Q9NZI6 479 aa19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 E7EVH7 732 aa19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 CRCPO75575 148 aa19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 C17orf53Q8N3J3 647 aaPredicted RBP19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 TBC1D7Q9P0N9 293 aa19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 ASIC2Q16515 512 aa19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 INTS8Q75QN2 995 aaKnown RBP19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 TRIM31Q9BZY9 425 aa19.44■□□□□ 0.7
ARHGEF28-212ENST00000513042 GEN1Q17RS7 908 aa19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 OTUD7AQ8TE49 926 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 KIFC2Q96AC6 838 aa19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 KDM5BQ9UGL1 1544 aa19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 NOL3O60936 208 aaKnown RBP19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 SF3A3Q12874 501 aaKnown RBP eCLIP19.43■□□□□ 0.74e-7■■■■□ 22.2
ARHGEF28-212ENST00000513042 KLHDC4Q8TBB5 520 aa19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 RPL13P26373 211 aaKnown RBP19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 CCDC26Q8TAB7 109 aa19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 PPANQ9NQ55 473 aaKnown RBP19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 ZYXQ15942 572 aaKnown RBP19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 CCDC14Q49A88 953 aa19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 OTUD7BQ6GQQ9 843 aa19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 JAKMIP2Q96AA8 810 aa19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 CTDSPL2Q05D32 466 aa19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 RNF34Q969K3 372 aa19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 PHACTR3Q96KR7 559 aa19.43■□□□□ 0.7
ARHGEF28-212ENST00000513042 TXKP42681 527 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 TBC1D8BQ0IIM8 1120 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 NAPGQ99747 312 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 ANKRD2Q9GZV1 360 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 WDR7Q9Y4E6 1490 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 SOS1Q07889 1333 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 SYNRGQ9UMZ2 1314 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 TIMM10P62072 90 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 INF2Q27J81 1249 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 CEP85LQ5SZL2 805 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 G2E3Q7L622 706 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 TEX11Q8IYF3 940 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 NCAPH2Q6IBW4 605 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 AFAP1L1Q8TED9 768 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 NKIRAS1Q9NYS0 192 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 BEND3Q5T5X7 828 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 KIFAP3Q92845 792 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 ZNF594Q96JF6 807 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 PLCH2O75038 1416 aa19.42■□□□□ 0.7
ARHGEF28-212ENST00000513042 POLR2DO15514 142 aaKnown RBP19.41■□□□□ 0.7
ARHGEF28-212ENST00000513042 CIB2O75838 187 aa19.41■□□□□ 0.7
ARHGEF28-212ENST00000513042 FAM89AQ96GI7 184 aa19.41■□□□□ 0.7
ARHGEF28-212ENST00000513042 CYP26C1Q6V0L0 522 aa19.41■□□□□ 0.7
ARHGEF28-212ENST00000513042 MYL10Q9BUA6 226 aa19.41■□□□□ 0.7
ARHGEF28-212ENST00000513042 ZBTB40Q9NUA8 1239 aa19.41■□□□□ 0.7
ARHGEF28-212ENST00000513042 OGFRQ9NZT2 677 aa19.41■□□□□ 0.7
ARHGEF28-212ENST00000513042 RNMTO43148 476 aaKnown RBP19.41■□□□□ 0.7
ARHGEF28-212ENST00000513042 ALDH3A1P30838 453 aa19.41■□□□□ 0.7
ARHGEF28-212ENST00000513042 RBM17Q96I25 401 aaKnown RBP19.41■□□□□ 0.7
ARHGEF28-212ENST00000513042 KIAA1524Q8TCG1 905 aa19.41■□□□□ 0.7
ARHGEF28-212ENST00000513042 FAM173BQ6P4H8 233 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms