RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 DIXDC1Q155Q3 683 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 C9orf131Q5VYM1 1079 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 HHIPL2Q6UWX4 724 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 GPC2Q8N158 579 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 SEC62Q99442 399 aaKnown RBP12.99□□□□□ -0.33
PFDN1-204ENST00000512707 DSCC1Q9BVC3 393 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 MXD3Q9BW11 206 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 CTNNA3Q9UI47 895 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 PSME4Q14997 1843 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 GAKO14976 1311 aa12.98□□□□□ -0.33
PFDN1-204ENST00000512707 BTDP43251 543 aa12.98□□□□□ -0.33
PFDN1-204ENST00000512707 CRKP46108 304 aa12.98□□□□□ -0.33
PFDN1-204ENST00000512707 SCNN1DP51172 638 aa12.98□□□□□ -0.33
PFDN1-204ENST00000512707 RNF20Q5VTR2 975 aa12.98□□□□□ -0.33
PFDN1-204ENST00000512707 DPY19L2Q6NUT2 758 aa12.98□□□□□ -0.33
PFDN1-204ENST00000512707 CCDC129Q6ZRS4 1044 aa12.98□□□□□ -0.33
PFDN1-204ENST00000512707 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
PFDN1-204ENST00000512707 ARMT1Q9H993 441 aa12.98□□□□□ -0.33
PFDN1-204ENST00000512707 AATFQ9NY61 560 aaKnown RBP eCLIP12.98□□□□□ -0.33
PFDN1-204ENST00000512707 SCN9AQ15858 1988 aa12.98□□□□□ -0.33
PFDN1-204ENST00000512707 GPR75-ASB3A0A0A6YYF3 556 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 MYO1BO43795 1136 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 TOMM70O94826 608 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 CHGBP05060 677 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 DSG3P32926 999 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 PRELPP51888 382 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 PPP4CP60510 307 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 GRIK5Q16478 980 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 AMOTL1Q8IY63 956 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 DPF2Q92785 391 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 ZDHHC15Q96MV8 337 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 STRBPQ96SI9 672 aaKnown RBP12.97□□□□□ -0.33
PFDN1-204ENST00000512707 DAGLAQ9Y4D2 1042 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 SLC4A4Q9Y6R1 1079 aa12.97□□□□□ -0.33
PFDN1-204ENST00000512707 TIAM2Q8IVF5 1701 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 DICER1Q9UPY3 1922 aaKnown RBP12.96□□□□□ -0.33
PFDN1-204ENST00000512707 ZNF541Q9H0D2 1346 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 SBF1O95248 1867 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 MYO5AQ9Y4I1 1855 aaKnown RBP12.96□□□□□ -0.33
PFDN1-204ENST00000512707 PATL2C9JE40 543 aaKnown RBP12.96□□□□□ -0.33
PFDN1-204ENST00000512707 SEC24BO95487 1268 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 HSPD1P10809 573 aaKnown RBP12.96□□□□□ -0.33
PFDN1-204ENST00000512707 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
PFDN1-204ENST00000512707 LMOD1P29536 600 aaPredicted RBP12.96□□□□□ -0.33
PFDN1-204ENST00000512707 USP5P45974 858 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 TDO2P48775 406 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 GMPSP49915 693 aaPredicted RBP12.96□□□□□ -0.33
PFDN1-204ENST00000512707 DLGAP5Q15398 846 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 ADGRA1Q86SQ6 560 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 LCORLQ8N3X6 602 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 ZNF384Q8TF68 577 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 GMLQ99445 158 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 RIOK1Q9BRS2 568 aaKnown RBP12.96□□□□□ -0.33
PFDN1-204ENST00000512707 USP26Q9BXU7 913 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 C22orf23Q9BZE7 217 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 LSG1Q9H089 658 aaKnown RBP12.96□□□□□ -0.33
PFDN1-204ENST00000512707 TMOD2Q9NZR1 351 aa12.96□□□□□ -0.33
PFDN1-204ENST00000512707 H7C1D1 291 aa12.95□□□□□ -0.34
PFDN1-204ENST00000512707 DYNLL1P63167 89 aaKnown RBP12.95□□□□□ -0.34
PFDN1-204ENST00000512707 IMMTQ16891 758 aaKnown RBP12.95□□□□□ -0.34
PFDN1-204ENST00000512707 CFAP100Q494V2 611 aa12.95□□□□□ -0.34
PFDN1-204ENST00000512707 GIMAP6Q6P9H5 292 aa12.95□□□□□ -0.34
PFDN1-204ENST00000512707 TEX11Q8IYF3 940 aa12.95□□□□□ -0.34
PFDN1-204ENST00000512707 DNAJC5GQ8N7S2 189 aa12.95□□□□□ -0.34
PFDN1-204ENST00000512707 MAP4K1Q92918 833 aa12.95□□□□□ -0.34
PFDN1-204ENST00000512707 NAPBQ9H115 298 aa12.95□□□□□ -0.34
PFDN1-204ENST00000512707 IL25Q9H293 177 aa12.95□□□□□ -0.34
PFDN1-204ENST00000512707 ATP8A2Q9NTI2 1148 aa12.95□□□□□ -0.34
PFDN1-204ENST00000512707 RBM8AQ9Y5S9 174 aaKnown RBP12.95□□□□□ -0.34
PFDN1-204ENST00000512707 ZMYM6O95789 1325 aa12.94□□□□□ -0.34
PFDN1-204ENST00000512707 MYH2Q9UKX2 1941 aa12.94□□□□□ -0.34
PFDN1-204ENST00000512707 PTH1RQ03431 593 aa12.94□□□□□ -0.34
PFDN1-204ENST00000512707 MICALL2Q8IY33 904 aa12.94□□□□□ -0.34
PFDN1-204ENST00000512707 NMRK2Q9NPI5 230 aa12.94□□□□□ -0.34
PFDN1-204ENST00000512707 USP40Q9NVE5 1235 aa12.94□□□□□ -0.34
PFDN1-204ENST00000512707 ZNF646O15015 1829 aaPredicted RBP12.94□□□□□ -0.34
PFDN1-204ENST00000512707 ZNF280AP59817 542 aaPredicted RBP12.93□□□□□ -0.34
PFDN1-204ENST00000512707 ANAPC15P60006 121 aa12.93□□□□□ -0.34
PFDN1-204ENST00000512707 KRT32Q14532 448 aa12.93□□□□□ -0.34
PFDN1-204ENST00000512707 ALX1Q15699 326 aa12.93□□□□□ -0.34
PFDN1-204ENST00000512707 IFNL3Q8IZI9 196 aa12.93□□□□□ -0.34
PFDN1-204ENST00000512707 MTMR14Q8NCE2 650 aa12.93□□□□□ -0.34
PFDN1-204ENST00000512707 SH3RF3Q8TEJ3 882 aaPredicted RBP12.93□□□□□ -0.34
PFDN1-204ENST00000512707 TBC1D32Q96NH3 1257 aa12.93□□□□□ -0.34
PFDN1-204ENST00000512707 MYOZ2Q9NPC6 264 aa12.93□□□□□ -0.34
PFDN1-204ENST00000512707 CNOT7Q9UIV1 285 aaKnown RBP12.93□□□□□ -0.34
PFDN1-204ENST00000512707 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
PFDN1-204ENST00000512707 GSG1L2A8MUP6 293 aa12.92□□□□□ -0.34
PFDN1-204ENST00000512707 ZNF213O14771 459 aa12.92□□□□□ -0.34
PFDN1-204ENST00000512707 SLC3A2P08195 630 aaKnown RBP12.92□□□□□ -0.34
PFDN1-204ENST00000512707 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
PFDN1-204ENST00000512707 HSPA4P34932 840 aa12.92□□□□□ -0.34
PFDN1-204ENST00000512707 RBM25P49756 843 aaKnown RBP12.92□□□□□ -0.34
PFDN1-204ENST00000512707 VPS53Q5VIR6 699 aa12.92□□□□□ -0.34
PFDN1-204ENST00000512707 APOBEC3HQ6NTF7 200 aaKnown RBP12.92□□□□□ -0.34
PFDN1-204ENST00000512707 RBM46Q8TBY0 533 aaKnown RBP12.92□□□□□ -0.34
PFDN1-204ENST00000512707 SDR42E1Q8WUS8 393 aa12.92□□□□□ -0.34
PFDN1-204ENST00000512707 GPRC5DQ9NZD1 345 aa12.92□□□□□ -0.34
PFDN1-204ENST00000512707 ARPP21Q9UBL0 812 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms